Gene annotation
Transcriptome id Sobic.001G474400.1
Synonym Sb01g044460
Functional annotation conserved oligomeric Golgi complex component 8, putative, expressed
UniProt C5WUS8
Pfam PF04124
Panther DB PTHR21311 PTHR21311:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0017119; Golgi transport complex


Orthologs (automatic annotation)
TAIR AT5G11980 : conserved oligomeric Golgi complex component-related / COG complex component-related
RAP-DB (Rice) LOC_Os12g35290.1 : conserved oligomeric Golgi complex component 8, putative, expressed
MaizeGDB (Corn) Zm00025a004083 , Zm00025a001044 , Zm00025a053210
Brachypodium KQJ86468
Barley HORVU5Hr1G025740.9 , HORVU5Hr1G025740.8 , HORVU5Hr1G025740.1 , HORVU5Hr1G025740.3 , HORVU5Hr1G025740.2 , HORVU5Hr1G025740.5 , HORVU5Hr1G025740.4 , HORVU5Hr1G025740.7 , HORVU5Hr1G025740.6 , HORVU5Hr1G025740.20 , HORVU5Hr1G025740.21 , HORVU5Hr1G025740.22 , HORVU5Hr1G025740.23 , HORVU5Hr1G025740.24 , HORVU5Hr1G025740.19 , HORVU5Hr1G025740.18 , HORVU5Hr1G025740.15 , HORVU5Hr1G025740.14 , HORVU5Hr1G025740.17 , HORVU5Hr1G025740.16 , HORVU5Hr1G025740.11 , HORVU5Hr1G025740.10 , HORVU5Hr1G025740.13 , HORVU5Hr1G025740.12
Wheat TraesCS5D02G107800 , TraesCS5D02G107800 , TraesCS5A02G095100 , TraesCS5A02G095100 , TraesCS5B02G101300 , TraesCS5B02G101300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G110499 - K14006: protein transport protein SEC23
2 Sobic.003G397900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed K12667: SWP1, oligosaccharyltransferase complex subunit delta (ribophorin II)
3 Sobic.007G145400 expressed protein -
4 Sobic.001G097900 expressed protein -
5 Sobic.005G114500 growth regulator related protein, putative, expressed -
6 Sobic.005G106200 expressed protein K10290: F-box protein 3
7 Sobic.010G223400 expressed protein -
8 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
9 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
10 Sobic.010G192600 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
11 Sobic.003G304400 NLI interacting factor-like phosphatase, putative, expressed K17496: mitochondrial import inner membrane translocase subunit TIM50
12 Sobic.001G117800 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
13 Sobic.002G340900 ATMIN7, putative, expressed K13462: guanine nucleotide-exchange factor
14 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
15 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
16 Sobic.003G189600 M16 domain containing zinc peptidase, putative, expressed -
17 Sobic.005G059500 expressed protein -
18 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
19 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
20 Sobic.009G120500 golgi transport complex protein-related, putative, expressed -


Gene co-expression network
sample Sobic001G474400 Sobic001G474400 Sobic005G110499 Sobic005G110499 Sobic001G474400--Sobic005G110499 Sobic003G397900 Sobic003G397900 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G097900 Sobic001G097900 Sobic001G474400--Sobic001G097900 Sobic005G114500 Sobic005G114500 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic010G223400 Sobic010G223400 Sobic001G474400--Sobic010G223400 Sobic001G467100 Sobic001G467100 Sobic001G474400--Sobic001G467100 Sobic006G265600 Sobic006G265600 Sobic001G474400--Sobic006G265600 Sobic003G189600 Sobic003G189600 Sobic005G110499--Sobic003G189600 Sobic005G110499--Sobic001G474400 Sobic001G308400 Sobic001G308400 Sobic005G110499--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic005G110499--Sobic003G394200 Sobic004G053500 Sobic004G053500 Sobic005G110499--Sobic004G053500 Sobic002G401500 Sobic002G401500 Sobic005G110499--Sobic002G401500 Sobic006G021700 Sobic006G021700 Sobic005G110499--Sobic006G021700 Sobic002G371700 Sobic002G371700 Sobic005G110499--Sobic002G371700 Sobic003G209200 Sobic003G209200 Sobic005G110499--Sobic003G209200 Sobic001G455000 Sobic001G455000 Sobic003G397900--Sobic001G455000 Sobic003G397900--Sobic006G265600 Sobic003G397900--Sobic001G474400 Sobic003G304400 Sobic003G304400 Sobic003G397900--Sobic003G304400 Sobic002G075900 Sobic002G075900 Sobic003G397900--Sobic002G075900 Sobic001G445500 Sobic001G445500 Sobic003G397900--Sobic001G445500 Sobic001G151600 Sobic001G151600 Sobic003G397900--Sobic001G151600 Sobic001G015400 Sobic001G015400 Sobic003G397900--Sobic001G015400 Sobic003G397900--Sobic010G223400 Sobic007G145400--Sobic001G474400 Sobic009G003700 Sobic009G003700 Sobic007G145400--Sobic009G003700 Sobic001G248100 Sobic001G248100 Sobic007G145400--Sobic001G248100 Sobic002G119600 Sobic002G119600 Sobic007G145400--Sobic002G119600 Sobic006G261400 Sobic006G261400 Sobic007G145400--Sobic006G261400 Sobic003G314700 Sobic003G314700 Sobic007G145400--Sobic003G314700 Sobic007G145400--Sobic001G467100 Sobic008G092800 Sobic008G092800 Sobic007G145400--Sobic008G092800 Sobic006G245900 Sobic006G245900 Sobic007G145400--Sobic006G245900 Sobic010G192600 Sobic010G192600 Sobic001G097900--Sobic010G192600 Sobic001G097900--Sobic001G474400 Sobic001G097900--Sobic001G445500 Sobic006G106300 Sobic006G106300 Sobic001G097900--Sobic006G106300 Sobic001G097900--Sobic005G110499 Sobic002G227500 Sobic002G227500 Sobic001G097900--Sobic002G227500 Sobic001G097900--Sobic001G308400 Sobic009G040250 Sobic009G040250 Sobic001G097900--Sobic009G040250 Sobic001G097900--Sobic005G114500 Sobic003G130900 Sobic003G130900 Sobic005G114500--Sobic003G130900 Sobic003G230600 Sobic003G230600 Sobic005G114500--Sobic003G230600 Sobic005G114500--Sobic001G474400 Sobic005G114500--Sobic010G223400 Sobic005G114500--Sobic001G308400 Sobic003G005900 Sobic003G005900 Sobic005G114500--Sobic003G005900 Sobic005G059500 Sobic005G059500 Sobic005G114500--Sobic005G059500 Sobic005G114500--Sobic005G110499 Sobic009G122500 Sobic009G122500 Sobic005G114500--Sobic009G122500 Sobic005G106200--Sobic001G474400 Sobic005G106200--Sobic007G145400 Sobic005G133800 Sobic005G133800 Sobic005G106200--Sobic005G133800 Sobic003G405500 Sobic003G405500 Sobic005G106200--Sobic003G405500 Sobic001G004100 Sobic001G004100 Sobic005G106200--Sobic001G004100 Sobic006G166200 Sobic006G166200 Sobic005G106200--Sobic006G166200 Sobic002G430300 Sobic002G430300 Sobic005G106200--Sobic002G430300 Sobic010G278600 Sobic010G278600 Sobic005G106200--Sobic010G278600 Sobic005G115500 Sobic005G115500 Sobic005G106200--Sobic005G115500 Sobic010G223400--Sobic009G122500 Sobic010G223400--Sobic003G394200 Sobic010G223400--Sobic005G059500 Sobic001G193100 Sobic001G193100 Sobic010G223400--Sobic001G193100 Sobic003G182300 Sobic003G182300 Sobic010G223400--Sobic003G182300 Sobic010G223400--Sobic005G114500 Sobic010G223400--Sobic001G474400 Sobic004G078700 Sobic004G078700 Sobic010G223400--Sobic004G078700 Sobic001G012900 Sobic001G012900 Sobic010G223400--Sobic001G012900 Sobic004G208500 Sobic004G208500 Sobic001G467100--Sobic004G208500 Sobic010G172400 Sobic010G172400 Sobic001G467100--Sobic010G172400 Sobic001G467100--Sobic001G474400 Sobic001G099900 Sobic001G099900 Sobic001G467100--Sobic001G099900 Sobic003G222700 Sobic003G222700 Sobic001G467100--Sobic003G222700 Sobic001G467100--Sobic007G145400 Sobic001G467100--Sobic005G114500 Sobic001G161700 Sobic001G161700 Sobic001G467100--Sobic001G161700 Sobic001G467100--Sobic005G110499 Sobic006G265600--Sobic003G397900 Sobic006G265600--Sobic001G474400 Sobic002G399900 Sobic002G399900 Sobic006G265600--Sobic002G399900 Sobic006G265600--Sobic003G005900 Sobic006G265600--Sobic001G151600 Sobic006G265600--Sobic002G075900 Sobic002G160700 Sobic002G160700 Sobic006G265600--Sobic002G160700 Sobic009G120500 Sobic009G120500 Sobic006G265600--Sobic009G120500 Sobic002G364900 Sobic002G364900 Sobic006G265600--Sobic002G364900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.