Gene annotation
Transcriptome id Sobic.003G397900.1
Synonym Sb03g043460, HAP6
Functional annotation dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed
UniProt A0A1W0W123
Pfam PF05817
Panther DB PTHR12640 PTHR12640:SF0
NCBI CDD KOG2447; Oligosaccharyltransferase, delta subunit (ribophorin II)
KEGG Orthology K12667; SWP1, oligosaccharyltransferase complex subunit delta (ribophorin II)
Gene Ontology GO:0016021; integral component of membrane GO:0008250oligosaccharyltransferase complex GO:0006487protein N-linked glycosylation


Orthologs (automatic annotation)
TAIR AT4G21150 : ribophorin II (RPN2) family protein
RAP-DB (Rice) LOC_Os01g68324.3 : dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed
MaizeGDB (Corn) Zm00025a039389 , Zm00025a026329
Brachypodium KQK11139
Barley HORVU3Hr1G092660.10 , HORVU3Hr1G092660.11 , HORVU3Hr1G092660.9 , HORVU3Hr1G092660.8 , HORVU3Hr1G092660.6 , HORVU3Hr1G092660.7 , HORVU3Hr1G092660.4 , HORVU3Hr1G092660.5 , HORVU3Hr1G092660.2 , HORVU3Hr1G092660.1
Wheat TraesCS3D02G412500 , TraesCS3D02G412500
Populus -


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cDNA sequences
Sobic.003G397900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G455000 glycosyl hydrolase, family 31, putative, expressed K05546: mannosyl-oligosaccharide alpha-1,3-glucosidase
2 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
3 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
4 Sobic.003G304400 NLI interacting factor-like phosphatase, putative, expressed K17496: mitochondrial import inner membrane translocase subunit TIM50
5 Sobic.002G075900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDasubunit precursor, putative, expressed K12670: oligosaccharyltransferase complex subunit beta
6 Sobic.001G445500 coatomer subunit gamma-1, putative, expressed K17267: coatomer subunit gamma
7 Sobic.001G151600 OsRhmbd9 - Putative Rhomboid homologue, expressed -
8 Sobic.001G015400 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
9 Sobic.010G223400 expressed protein -
10 Sobic.004G151200 RNA-binding protein-like, putative, expressed -
11 Sobic.006G282200 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed K12666: OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
12 Sobic.001G097900 expressed protein -
13 Sobic.001G205100 expressed protein -
14 Sobic.005G110499 - K14006: protein transport protein SEC23
15 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
16 Sobic.001G520300 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed K12666: OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
17 Sobic.010G192600 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
18 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
19 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
20 Sobic.005G133800 NEF1, putative, expressed -


Gene co-expression network
sample Sobic003G397900 Sobic003G397900 Sobic001G455000 Sobic001G455000 Sobic003G397900--Sobic001G455000 Sobic006G265600 Sobic006G265600 Sobic003G397900--Sobic006G265600 Sobic001G474400 Sobic001G474400 Sobic003G397900--Sobic001G474400 Sobic003G304400 Sobic003G304400 Sobic003G397900--Sobic003G304400 Sobic002G075900 Sobic002G075900 Sobic003G397900--Sobic002G075900 Sobic001G445500 Sobic001G445500 Sobic003G397900--Sobic001G445500 Sobic001G151600 Sobic001G151600 Sobic003G397900--Sobic001G151600 Sobic001G015400 Sobic001G015400 Sobic003G397900--Sobic001G015400 Sobic010G223400 Sobic010G223400 Sobic003G397900--Sobic010G223400 Sobic004G151200 Sobic004G151200 Sobic001G455000--Sobic004G151200 Sobic001G455000--Sobic003G397900 Sobic007G118500 Sobic007G118500 Sobic001G455000--Sobic007G118500 Sobic008G019532 Sobic008G019532 Sobic001G455000--Sobic008G019532 Sobic001G356100 Sobic001G356100 Sobic001G455000--Sobic001G356100 Sobic003G130900 Sobic003G130900 Sobic001G455000--Sobic003G130900 Sobic001G114200 Sobic001G114200 Sobic001G455000--Sobic001G114200 Sobic001G455000--Sobic001G445500 Sobic003G394500 Sobic003G394500 Sobic001G455000--Sobic003G394500 Sobic006G265600--Sobic003G397900 Sobic006G265600--Sobic001G474400 Sobic002G399900 Sobic002G399900 Sobic006G265600--Sobic002G399900 Sobic003G005900 Sobic003G005900 Sobic006G265600--Sobic003G005900 Sobic006G265600--Sobic001G151600 Sobic006G265600--Sobic002G075900 Sobic002G160700 Sobic002G160700 Sobic006G265600--Sobic002G160700 Sobic009G120500 Sobic009G120500 Sobic006G265600--Sobic009G120500 Sobic002G364900 Sobic002G364900 Sobic006G265600--Sobic002G364900 Sobic005G110499 Sobic005G110499 Sobic001G474400--Sobic005G110499 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G097900 Sobic001G097900 Sobic001G474400--Sobic001G097900 Sobic005G114500 Sobic005G114500 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic001G474400--Sobic010G223400 Sobic001G467100 Sobic001G467100 Sobic001G474400--Sobic001G467100 Sobic001G474400--Sobic006G265600 Sobic003G304400--Sobic002G364900 Sobic003G304400--Sobic003G397900 Sobic002G398700 Sobic002G398700 Sobic003G304400--Sobic002G398700 Sobic003G304400--Sobic001G474400 Sobic002G150700 Sobic002G150700 Sobic003G304400--Sobic002G150700 Sobic010G192600 Sobic010G192600 Sobic003G304400--Sobic010G192600 Sobic003G202100 Sobic003G202100 Sobic003G304400--Sobic003G202100 Sobic003G304400--Sobic001G015400 Sobic003G304400--Sobic006G265600 Sobic002G075900--Sobic003G397900 Sobic001G520300 Sobic001G520300 Sobic002G075900--Sobic001G520300 Sobic002G075900--Sobic006G265600 Sobic004G141800 Sobic004G141800 Sobic002G075900--Sobic004G141800 Sobic008G103300 Sobic008G103300 Sobic002G075900--Sobic008G103300 Sobic002G075900--Sobic001G474400 Sobic008G129600 Sobic008G129600 Sobic002G075900--Sobic008G129600 Sobic005G133800 Sobic005G133800 Sobic002G075900--Sobic005G133800 Sobic003G046300 Sobic003G046300 Sobic002G075900--Sobic003G046300 Sobic003G346400 Sobic003G346400 Sobic001G445500--Sobic003G346400 Sobic001G445500--Sobic001G097900 Sobic001G445500--Sobic001G455000 Sobic001G445500--Sobic003G397900 Sobic006G203300 Sobic006G203300 Sobic001G445500--Sobic006G203300 Sobic010G171000 Sobic010G171000 Sobic001G445500--Sobic010G171000 Sobic001G445500--Sobic003G130900 Sobic001G374000 Sobic001G374000 Sobic001G445500--Sobic001G374000 Sobic005G114800 Sobic005G114800 Sobic001G445500--Sobic005G114800 Sobic001G151600--Sobic002G160700 Sobic001G151600--Sobic003G397900 Sobic001G151600--Sobic006G265600 Sobic001G151600--Sobic001G474400 Sobic002G070600 Sobic002G070600 Sobic001G151600--Sobic002G070600 Sobic009G003700 Sobic009G003700 Sobic001G151600--Sobic009G003700 Sobic001G151600--Sobic004G151200 Sobic002G199400 Sobic002G199400 Sobic001G151600--Sobic002G199400 Sobic001G117800 Sobic001G117800 Sobic001G151600--Sobic001G117800 Sobic001G099900 Sobic001G099900 Sobic001G015400--Sobic001G099900 Sobic004G208500 Sobic004G208500 Sobic001G015400--Sobic004G208500 Sobic007G005500 Sobic007G005500 Sobic001G015400--Sobic007G005500 Sobic006G021700 Sobic006G021700 Sobic001G015400--Sobic006G021700 Sobic003G143800 Sobic003G143800 Sobic001G015400--Sobic003G143800 Sobic006G260500 Sobic006G260500 Sobic001G015400--Sobic006G260500 Sobic003G182300 Sobic003G182300 Sobic001G015400--Sobic003G182300 Sobic001G015400--Sobic002G398700 Sobic006G106300 Sobic006G106300 Sobic001G015400--Sobic006G106300 Sobic009G122500 Sobic009G122500 Sobic010G223400--Sobic009G122500 Sobic003G394200 Sobic003G394200 Sobic010G223400--Sobic003G394200 Sobic005G059500 Sobic005G059500 Sobic010G223400--Sobic005G059500 Sobic001G193100 Sobic001G193100 Sobic010G223400--Sobic001G193100 Sobic010G223400--Sobic003G182300 Sobic010G223400--Sobic005G114500 Sobic010G223400--Sobic001G474400 Sobic004G078700 Sobic004G078700 Sobic010G223400--Sobic004G078700 Sobic001G012900 Sobic001G012900 Sobic010G223400--Sobic001G012900
Octagon: transcription factors


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