Gene annotation
Transcriptome id Sobic.002G075900.1
Synonym Sb02g006330, DGL1
Functional annotation dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDasubunit precursor, putative, expressed
UniProt C5XDA8
Pfam PF03345
Panther DB PTHR10830 PTHR10830:SF0
NCBI CDD -
KEGG Orthology K12670; oligosaccharyltransferase complex subunit beta
Gene Ontology GO:0018279; protein N-linked glycosylation via asparagine GO:0005789endoplasmic reticulum membrane


Orthologs (automatic annotation)
TAIR AT5G66680 : dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein
RAP-DB (Rice) LOC_Os07g10830.1 : dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDasubunit precursor, putative, expressed
MaizeGDB (Corn) Zm00025a045385 , Zm00025a013414 , Zm00025a023424 , Zm00025a025692
Brachypodium KQK20386
Barley HORVU0Hr1G039470.1
Wheat TraesCS7B02G315600 , TraesCS7A02G415500 , TraesCS7A02G415500 , TraesCS7D02G409000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.002G075900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G397900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed K12667: SWP1, oligosaccharyltransferase complex subunit delta (ribophorin II)
2 Sobic.001G520300 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed K12666: OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
3 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
4 Sobic.004G141800 expressed protein -
5 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
6 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
7 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
8 Sobic.005G133800 NEF1, putative, expressed -
9 Sobic.003G046300 ubiquitin carboxyl-terminal hydrolase 14, putative, expressed K11836: USP5_13, ubiquitin carboxyl-terminal hydrolase 5/13
10 Sobic.001G408600 RNA pseudouridine synthase, putative, expressed -
11 Sobic.002G160700 WD domain, G-beta repeat domain containing protein, expressed K12880: THO complex subunit 3
12 Sobic.001G151600 OsRhmbd9 - Putative Rhomboid homologue, expressed -
13 Sobic.001G103300 calcium-transporting ATPase 3, endoplasmic reticulum-type, putative, expressed K05853: P-type Ca2+ transporter type 2A
14 Sobic.002G199400 growth regulator related protein, putative, expressed -
15 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
16 Sobic.002G430300 HEAT repeat family protein, putative, expressed K06100: symplekin
17 Sobic.001G393700 expressed protein -
18 Sobic.006G282200 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed K12666: OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
19 Sobic.001G455800 methionyl-tRNA synthetase, putative, expressed K01874: MARS, methionyl-tRNA synthetase
20 Sobic.010G264000 expressed protein(PubMedID : 28640841)@expressed protein -


Gene co-expression network
sample Sobic002G075900 Sobic002G075900 Sobic003G397900 Sobic003G397900 Sobic002G075900--Sobic003G397900 Sobic001G520300 Sobic001G520300 Sobic002G075900--Sobic001G520300 Sobic006G265600 Sobic006G265600 Sobic002G075900--Sobic006G265600 Sobic004G141800 Sobic004G141800 Sobic002G075900--Sobic004G141800 Sobic008G103300 Sobic008G103300 Sobic002G075900--Sobic008G103300 Sobic001G474400 Sobic001G474400 Sobic002G075900--Sobic001G474400 Sobic008G129600 Sobic008G129600 Sobic002G075900--Sobic008G129600 Sobic005G133800 Sobic005G133800 Sobic002G075900--Sobic005G133800 Sobic003G046300 Sobic003G046300 Sobic002G075900--Sobic003G046300 Sobic001G455000 Sobic001G455000 Sobic003G397900--Sobic001G455000 Sobic003G397900--Sobic006G265600 Sobic003G397900--Sobic001G474400 Sobic003G304400 Sobic003G304400 Sobic003G397900--Sobic003G304400 Sobic003G397900--Sobic002G075900 Sobic001G445500 Sobic001G445500 Sobic003G397900--Sobic001G445500 Sobic001G151600 Sobic001G151600 Sobic003G397900--Sobic001G151600 Sobic001G015400 Sobic001G015400 Sobic003G397900--Sobic001G015400 Sobic010G223400 Sobic010G223400 Sobic003G397900--Sobic010G223400 Sobic001G520300--Sobic002G075900 Sobic001G520300--Sobic001G474400 Sobic001G520300--Sobic003G397900 Sobic001G161700 Sobic001G161700 Sobic001G520300--Sobic001G161700 Sobic001G117800 Sobic001G117800 Sobic001G520300--Sobic001G117800 Sobic003G196200 Sobic003G196200 Sobic001G520300--Sobic003G196200 Sobic002G301100 Sobic002G301100 Sobic001G520300--Sobic002G301100 Sobic001G077900 Sobic001G077900 Sobic001G520300--Sobic001G077900 Sobic001G522000 Sobic001G522000 Sobic001G520300--Sobic001G522000 Sobic006G265600--Sobic003G397900 Sobic006G265600--Sobic001G474400 Sobic002G399900 Sobic002G399900 Sobic006G265600--Sobic002G399900 Sobic003G005900 Sobic003G005900 Sobic006G265600--Sobic003G005900 Sobic006G265600--Sobic001G151600 Sobic006G265600--Sobic002G075900 Sobic002G160700 Sobic002G160700 Sobic006G265600--Sobic002G160700 Sobic009G120500 Sobic009G120500 Sobic006G265600--Sobic009G120500 Sobic002G364900 Sobic002G364900 Sobic006G265600--Sobic002G364900 Sobic002G430300 Sobic002G430300 Sobic004G141800--Sobic002G430300 Sobic003G405500 Sobic003G405500 Sobic004G141800--Sobic003G405500 Sobic004G236800 Sobic004G236800 Sobic004G141800--Sobic004G236800 Sobic002G227500 Sobic002G227500 Sobic004G141800--Sobic002G227500 Sobic001G030000 Sobic001G030000 Sobic004G141800--Sobic001G030000 Sobic003G143800 Sobic003G143800 Sobic004G141800--Sobic003G143800 Sobic003G312700 Sobic003G312700 Sobic004G141800--Sobic003G312700 Sobic001G035200 Sobic001G035200 Sobic004G141800--Sobic001G035200 Sobic002G386600 Sobic002G386600 Sobic004G141800--Sobic002G386600 Sobic008G055900 Sobic008G055900 Sobic008G103300--Sobic008G055900 Sobic002G371700 Sobic002G371700 Sobic008G103300--Sobic002G371700 Sobic008G103300--Sobic003G046300 Sobic003G132000 Sobic003G132000 Sobic008G103300--Sobic003G132000 Sobic005G074500 Sobic005G074500 Sobic008G103300--Sobic005G074500 Sobic001G114500 Sobic001G114500 Sobic008G103300--Sobic001G114500 Sobic001G145400 Sobic001G145400 Sobic008G103300--Sobic001G145400 Sobic006G200700 Sobic006G200700 Sobic008G103300--Sobic006G200700 Sobic002G295500 Sobic002G295500 Sobic008G103300--Sobic002G295500 Sobic005G110499 Sobic005G110499 Sobic001G474400--Sobic005G110499 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G097900 Sobic001G097900 Sobic001G474400--Sobic001G097900 Sobic005G114500 Sobic005G114500 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic001G474400--Sobic010G223400 Sobic001G467100 Sobic001G467100 Sobic001G474400--Sobic001G467100 Sobic001G474400--Sobic006G265600 Sobic008G129600--Sobic008G055900 Sobic007G177300 Sobic007G177300 Sobic008G129600--Sobic007G177300 Sobic006G056200 Sobic006G056200 Sobic008G129600--Sobic006G056200 Sobic008G129600--Sobic008G103300 Sobic010G264000 Sobic010G264000 Sobic008G129600--Sobic010G264000 Sobic008G129600--Sobic001G467100 Sobic001G449900 Sobic001G449900 Sobic008G129600--Sobic001G449900 Sobic003G182300 Sobic003G182300 Sobic008G129600--Sobic003G182300 Sobic006G270600 Sobic006G270600 Sobic008G129600--Sobic006G270600 Sobic006G166200 Sobic006G166200 Sobic005G133800--Sobic006G166200 Sobic004G053500 Sobic004G053500 Sobic005G133800--Sobic004G053500 Sobic005G133800--Sobic002G430300 Sobic006G224800 Sobic006G224800 Sobic005G133800--Sobic006G224800 Sobic005G133800--Sobic005G110499 Sobic005G133800--Sobic003G405500 Sobic004G256500 Sobic004G256500 Sobic005G133800--Sobic004G256500 Sobic003G062300 Sobic003G062300 Sobic005G133800--Sobic003G062300 Sobic001G058200 Sobic001G058200 Sobic005G133800--Sobic001G058200 Sobic006G188500 Sobic006G188500 Sobic003G046300--Sobic006G188500 Sobic003G046300--Sobic008G103300 Sobic002G142900 Sobic002G142900 Sobic003G046300--Sobic002G142900 Sobic003G046300--Sobic002G371700 Sobic003G046300--Sobic003G132000 Sobic007G000200 Sobic007G000200 Sobic003G046300--Sobic007G000200 Sobic002G263600 Sobic002G263600 Sobic003G046300--Sobic002G263600 Sobic001G455800 Sobic001G455800 Sobic003G046300--Sobic001G455800 Sobic001G487100 Sobic001G487100 Sobic003G046300--Sobic001G487100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.