Gene annotation
Transcriptome id Sobic.004G141800.4,Sobic.004G141800.2,Sobic.004G141800.3,Sobic.004G141800.1
Synonym Sb04g017540
Functional annotation expressed protein
UniProt A0A194YPM2 , A0A1Z5RMD0
Pfam -
Panther DB PTHR31515 PTHR31515:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G58100 : -
RAP-DB (Rice) LOC_Os02g26984.1 : expressed protein
MaizeGDB (Corn) Zm00025a020274 , Zm00025a020278 , Zm00025a020280
Brachypodium KQJ99440 , KQJ99439 , KQJ99438
Barley HORVU5Hr1G114510.3 , HORVU5Hr1G114510.2 , HORVU5Hr1G114510.1 , HORVU5Hr1G114510.7 , HORVU5Hr1G114510.6 , HORVU5Hr1G114510.5 , HORVU5Hr1G114510.4 , HORVU5Hr1G114510.9 , HORVU5Hr1G114510.8 , HORVU5Hr1G114510.11 , HORVU5Hr1G114510.10
Wheat TraesCS5B02G499600 , TraesCS5B02G499600 , TraesCS5A02G485700 , TraesCS5A02G485700 , TraesCS5B02G499600 , TraesCS5A02G485700 , TraesCS5B02G499600 , TraesCS5D02G499700 , TraesCS5D02G499700 , TraesCS5D02G499700
Populus -


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cDNA sequences
Sobic.004G141800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G430300 HEAT repeat family protein, putative, expressed K06100: symplekin
2 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
3 Sobic.004G236800 MAG2, putative, expressed -
4 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
5 Sobic.001G030000 FG-GAP repeat-containing protein, putative, expressed -
6 Sobic.003G143800 nodal modulator 1 precursor, putative, expressed -
7 Sobic.003G312700 glycosyl hydrolase family 47 domain contain protein, expressed K10085: ER degradation enhancer, mannosidase alpha-like 2
8 Sobic.001G035200 ThiF family domain containing protein, putative, expressed K04532: NAE1, amyloid beta precursor protein binding protein 1
9 Sobic.002G386600 heat shock protein DnaJ, putative, expressed -
10 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
11 Sobic.002G263700 bromodomain protein 103, putative, expressed -
12 Sobic.003G152400 WD domain containing protein, putative, expressed K17601: WD repeat-containing protein 81
13 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
14 Sobic.006G029100 actin, putative, expressed K11673: ACTR8, ARP8, actin-related protein 8
15 Sobic.003G246000 exosome complex exonuclease RRP40, putative, expressed K03681: RRP40, exosome complex component RRP40
16 Sobic.001G393700 expressed protein -
17 Sobic.002G075900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDasubunit precursor, putative, expressed K12670: oligosaccharyltransferase complex subunit beta
18 Sobic.002G063900 zinc ion binding protein, putative, expressed -
19 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
20 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -


Gene co-expression network
sample Sobic004G141800 Sobic004G141800 Sobic002G430300 Sobic002G430300 Sobic004G141800--Sobic002G430300 Sobic003G405500 Sobic003G405500 Sobic004G141800--Sobic003G405500 Sobic004G236800 Sobic004G236800 Sobic004G141800--Sobic004G236800 Sobic002G227500 Sobic002G227500 Sobic004G141800--Sobic002G227500 Sobic001G030000 Sobic001G030000 Sobic004G141800--Sobic001G030000 Sobic003G143800 Sobic003G143800 Sobic004G141800--Sobic003G143800 Sobic003G312700 Sobic003G312700 Sobic004G141800--Sobic003G312700 Sobic001G035200 Sobic001G035200 Sobic004G141800--Sobic001G035200 Sobic002G386600 Sobic002G386600 Sobic004G141800--Sobic002G386600 Sobic002G430300--Sobic004G141800 Sobic001G393700 Sobic001G393700 Sobic002G430300--Sobic001G393700 Sobic002G430300--Sobic003G405500 Sobic003G152400 Sobic003G152400 Sobic002G430300--Sobic003G152400 Sobic001G145400 Sobic001G145400 Sobic002G430300--Sobic001G145400 Sobic005G133800 Sobic005G133800 Sobic002G430300--Sobic005G133800 Sobic001G087600 Sobic001G087600 Sobic002G430300--Sobic001G087600 Sobic006G224800 Sobic006G224800 Sobic002G430300--Sobic006G224800 Sobic002G145800 Sobic002G145800 Sobic002G430300--Sobic002G145800 Sobic003G405500--Sobic001G145400 Sobic008G124800 Sobic008G124800 Sobic003G405500--Sobic008G124800 Sobic003G405500--Sobic002G430300 Sobic009G084900 Sobic009G084900 Sobic003G405500--Sobic009G084900 Sobic006G166200 Sobic006G166200 Sobic003G405500--Sobic006G166200 Sobic003G405500--Sobic004G141800 Sobic006G077200 Sobic006G077200 Sobic003G405500--Sobic006G077200 Sobic010G059500 Sobic010G059500 Sobic003G405500--Sobic010G059500 Sobic003G314700 Sobic003G314700 Sobic003G405500--Sobic003G314700 Sobic004G236800--Sobic004G141800 Sobic004G236800--Sobic002G430300 Sobic004G236800--Sobic003G405500 Sobic004G236800--Sobic003G152400 Sobic002G063900 Sobic002G063900 Sobic004G236800--Sobic002G063900 Sobic010G278600 Sobic010G278600 Sobic004G236800--Sobic010G278600 Sobic004G246100 Sobic004G246100 Sobic004G236800--Sobic004G246100 Sobic010G187600 Sobic010G187600 Sobic004G236800--Sobic010G187600 Sobic004G236800--Sobic001G145400 Sobic001G308400 Sobic001G308400 Sobic002G227500--Sobic001G308400 Sobic003G021600 Sobic003G021600 Sobic002G227500--Sobic003G021600 Sobic001G156900 Sobic001G156900 Sobic002G227500--Sobic001G156900 Sobic010G169900 Sobic010G169900 Sobic002G227500--Sobic010G169900 Sobic004G265500 Sobic004G265500 Sobic002G227500--Sobic004G265500 Sobic003G043000 Sobic003G043000 Sobic002G227500--Sobic003G043000 Sobic002G227500--Sobic003G405500 Sobic003G181700 Sobic003G181700 Sobic002G227500--Sobic003G181700 Sobic002G227500--Sobic010G059500 Sobic001G030000--Sobic001G308400 Sobic001G030000--Sobic004G141800 Sobic001G030000--Sobic010G169900 Sobic001G030000--Sobic003G043000 Sobic001G030000--Sobic004G265500 Sobic001G030000--Sobic002G227500 Sobic005G110499 Sobic005G110499 Sobic001G030000--Sobic005G110499 Sobic001G030000--Sobic003G405500 Sobic003G163200 Sobic003G163200 Sobic001G030000--Sobic003G163200 Sobic003G143800--Sobic008G124800 Sobic006G021700 Sobic006G021700 Sobic003G143800--Sobic006G021700 Sobic001G015400 Sobic001G015400 Sobic003G143800--Sobic001G015400 Sobic007G155500 Sobic007G155500 Sobic003G143800--Sobic007G155500 Sobic008G092800 Sobic008G092800 Sobic003G143800--Sobic008G092800 Sobic002G340900 Sobic002G340900 Sobic003G143800--Sobic002G340900 Sobic003G143800--Sobic004G141800 Sobic005G114500 Sobic005G114500 Sobic003G143800--Sobic005G114500 Sobic003G143800--Sobic003G405500 Sobic003G312700--Sobic001G087600 Sobic001G014300 Sobic001G014300 Sobic003G312700--Sobic001G014300 Sobic003G312700--Sobic003G405500 Sobic003G312700--Sobic004G141800 Sobic003G312700--Sobic002G430300 Sobic004G355800 Sobic004G355800 Sobic003G312700--Sobic004G355800 Sobic003G312700--Sobic003G152400 Sobic003G312700--Sobic002G063900 Sobic008G140700 Sobic008G140700 Sobic003G312700--Sobic008G140700 Sobic001G035200--Sobic010G059500 Sobic001G035200--Sobic001G145400 Sobic010G185400 Sobic010G185400 Sobic001G035200--Sobic010G185400 Sobic001G035200--Sobic006G077200 Sobic010G034100 Sobic010G034100 Sobic001G035200--Sobic010G034100 Sobic001G035200--Sobic009G084900 Sobic001G155400 Sobic001G155400 Sobic001G035200--Sobic001G155400 Sobic002G371700 Sobic002G371700 Sobic001G035200--Sobic002G371700 Sobic001G035200--Sobic001G087600 Sobic002G386900 Sobic002G386900 Sobic002G386600--Sobic002G386900 Sobic006G029100 Sobic006G029100 Sobic002G386600--Sobic006G029100 Sobic002G386600--Sobic004G141800 Sobic006G265600 Sobic006G265600 Sobic002G386600--Sobic006G265600 Sobic002G398700 Sobic002G398700 Sobic002G386600--Sobic002G398700 Sobic002G160700 Sobic002G160700 Sobic002G386600--Sobic002G160700 Sobic001G085800 Sobic001G085800 Sobic002G386600--Sobic001G085800 Sobic003G397900 Sobic003G397900 Sobic002G386600--Sobic003G397900 Sobic003G246000 Sobic003G246000 Sobic002G386600--Sobic003G246000
Octagon: transcription factors


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