Gene annotation
Transcriptome id Sobic.003G152400.2,Sobic.003G152400.1
Synonym Sb03g013240
Functional annotation WD domain containing protein, putative, expressed
UniProt A0A1B6Q3D4 , A0A1B6Q3C9
Pfam PF00069 PF02138
Panther DB PTHR13743 PTHR13743:SF57
NCBI CDD KOG0771; Prolactin regulatory element-binding protein/Protein transport protein SEC12p KOG1240Protein kinase containing WD40 repeats
KEGG Orthology K17601; WD repeat-containing protein 81
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G18525 : protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases
RAP-DB (Rice) LOC_Os01g22390.2 : WD domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a024387
Brachypodium KQK04193
Barley HORVU7Hr1G080210.12 , HORVU7Hr1G080210.13 , HORVU7Hr1G080210.10 , HORVU7Hr1G080210.11 , HORVU7Hr1G080210.16 , HORVU7Hr1G080210.17 , HORVU7Hr1G080210.14 , HORVU7Hr1G080210.15 , HORVU7Hr1G080210.18 , HORVU7Hr1G080210.19 , HORVU7Hr1G080210.29 , HORVU7Hr1G080210.23 , HORVU7Hr1G080210.22 , HORVU7Hr1G080210.21 , HORVU7Hr1G080210.20 , HORVU7Hr1G080210.27 , HORVU7Hr1G080210.25 , HORVU7Hr1G080210.24 , HORVU7Hr1G080210.52 , HORVU7Hr1G080210.50 , HORVU7Hr1G080210.51 , HORVU7Hr1G080210.8 , HORVU7Hr1G080210.9 , HORVU7Hr1G080210.1 , HORVU7Hr1G080210.2 , HORVU7Hr1G080210.3 , HORVU7Hr1G080210.4 , HORVU7Hr1G080210.5 , HORVU7Hr1G080210.6 , HORVU7Hr1G080210.7 , HORVU7Hr1G080210.38 , HORVU7Hr1G080210.39 , HORVU7Hr1G080210.30 , HORVU7Hr1G080210.31 , HORVU7Hr1G080210.32 , HORVU7Hr1G080210.33 , HORVU7Hr1G080210.34 , HORVU7Hr1G080210.35 , HORVU7Hr1G080210.36 , HORVU7Hr1G080210.37 , HORVU7Hr1G080210.28 , HORVU7Hr1G080210.26 , HORVU7Hr1G080210.49 , HORVU7Hr1G080210.48 , HORVU7Hr1G080210.41 , HORVU7Hr1G080210.40 , HORVU7Hr1G080210.43 , HORVU7Hr1G080210.42 , HORVU7Hr1G080210.45 , HORVU7Hr1G080210.44 , HORVU7Hr1G080210.47 , HORVU7Hr1G080210.46
Wheat TraesCS7A02G346600 , TraesCS7A02G346600 , TraesCS7A02G346600 , TraesCS7A02G346600 , TraesCS7B02G236400 , TraesCS7B02G236400 , TraesCS7B02G236400 , TraesCS7D02G332300 , TraesCS7D02G332300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G357100 expressed protein -
2 Sobic.007G042400 HEAT repeat family protein, putative, expressed -
3 Sobic.002G430300 HEAT repeat family protein, putative, expressed K06100: symplekin
4 Sobic.004G223600 transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
5 Sobic.008G098300 ubiquitin carboxyl-terminal hydrolase 26, putative, expressed K11858: ubiquitin carboxyl-terminal hydrolase 48
6 Sobic.009G084900 expressed protein -
7 Sobic.002G063900 zinc ion binding protein, putative, expressed -
8 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
9 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
10 Sobic.004G236800 MAG2, putative, expressed -
11 Sobic.007G090430 - -
12 Sobic.001G087600 ZOS9-03 - C2H2 zinc finger protein, expressed -
13 Sobic.001G035200 ThiF family domain containing protein, putative, expressed K04532: NAE1, amyloid beta precursor protein binding protein 1
14 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
15 Sobic.004G051200 WD domain containing protein, putative, expressed -
16 Sobic.001G134300 - K17613: calcineurin-binding protein cabin-1
17 Sobic.003G312700 glycosyl hydrolase family 47 domain contain protein, expressed K10085: ER degradation enhancer, mannosidase alpha-like 2
18 Sobic.010G001100 chromo domain containing protein, expressed -
19 Sobic.006G224800 expressed protein -
20 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -


Gene co-expression network
sample Sobic003G152400 Sobic003G152400 Sobic004G357100 Sobic004G357100 Sobic003G152400--Sobic004G357100 Sobic007G042400 Sobic007G042400 Sobic003G152400--Sobic007G042400 Sobic002G430300 Sobic002G430300 Sobic003G152400--Sobic002G430300 Sobic004G223600 Sobic004G223600 Sobic003G152400--Sobic004G223600 Sobic008G098300 Sobic008G098300 Sobic003G152400--Sobic008G098300 Sobic009G084900 Sobic009G084900 Sobic003G152400--Sobic009G084900 Sobic002G063900 Sobic002G063900 Sobic003G152400--Sobic002G063900 Sobic004G246100 Sobic004G246100 Sobic003G152400--Sobic004G246100 Sobic001G145400 Sobic001G145400 Sobic003G152400--Sobic001G145400 SobicK028600 SobicK028600 Sobic004G357100--SobicK028600 Sobic003G444800 Sobic003G444800 Sobic004G357100--Sobic003G444800 Sobic004G357100--Sobic002G063900 Sobic004G357100--Sobic003G152400 Sobic003G043000 Sobic003G043000 Sobic004G357100--Sobic003G043000 Sobic004G265500 Sobic004G265500 Sobic004G357100--Sobic004G265500 Sobic001G308400 Sobic001G308400 Sobic004G357100--Sobic001G308400 Sobic004G357100--Sobic007G042400 Sobic006G234700 Sobic006G234700 Sobic004G357100--Sobic006G234700 Sobic007G042400--Sobic003G444800 Sobic007G042400--Sobic006G234700 Sobic007G042400--Sobic009G084900 Sobic007G042400--Sobic003G152400 Sobic010G059500 Sobic010G059500 Sobic007G042400--Sobic010G059500 Sobic009G247400 Sobic009G247400 Sobic007G042400--Sobic009G247400 Sobic003G059750 Sobic003G059750 Sobic007G042400--Sobic003G059750 Sobic007G042400--Sobic004G357100 Sobic001G311500 Sobic001G311500 Sobic007G042400--Sobic001G311500 Sobic004G141800 Sobic004G141800 Sobic002G430300--Sobic004G141800 Sobic001G393700 Sobic001G393700 Sobic002G430300--Sobic001G393700 Sobic003G405500 Sobic003G405500 Sobic002G430300--Sobic003G405500 Sobic002G430300--Sobic003G152400 Sobic002G430300--Sobic001G145400 Sobic005G133800 Sobic005G133800 Sobic002G430300--Sobic005G133800 Sobic001G087600 Sobic001G087600 Sobic002G430300--Sobic001G087600 Sobic006G224800 Sobic006G224800 Sobic002G430300--Sobic006G224800 Sobic002G145800 Sobic002G145800 Sobic002G430300--Sobic002G145800 Sobic001G219900 Sobic001G219900 Sobic004G223600--Sobic001G219900 Sobic001G214600 Sobic001G214600 Sobic004G223600--Sobic001G214600 Sobic002G317200 Sobic002G317200 Sobic004G223600--Sobic002G317200 Sobic003G307000 Sobic003G307000 Sobic004G223600--Sobic003G307000 Sobic004G223600--Sobic007G042400 Sobic004G223600--Sobic009G247400 Sobic004G223600--Sobic001G311500 Sobic002G071500 Sobic002G071500 Sobic004G223600--Sobic002G071500 Sobic004G223600--Sobic003G152400 Sobic004G048800 Sobic004G048800 Sobic008G098300--Sobic004G048800 Sobic001G363500 Sobic001G363500 Sobic008G098300--Sobic001G363500 Sobic010G001100 Sobic010G001100 Sobic008G098300--Sobic010G001100 Sobic001G433800 Sobic001G433800 Sobic008G098300--Sobic001G433800 Sobic003G072200 Sobic003G072200 Sobic008G098300--Sobic003G072200 Sobic007G062800 Sobic007G062800 Sobic008G098300--Sobic007G062800 Sobic005G112300 Sobic005G112300 Sobic008G098300--Sobic005G112300 Sobic006G040500 Sobic006G040500 Sobic008G098300--Sobic006G040500 Sobic003G360400 Sobic003G360400 Sobic008G098300--Sobic003G360400 Sobic009G084900--Sobic010G059500 Sobic009G084900--Sobic003G072200 Sobic001G493200 Sobic001G493200 Sobic009G084900--Sobic001G493200 Sobic009G084900--Sobic001G433800 Sobic009G131300 Sobic009G131300 Sobic009G084900--Sobic009G131300 Sobic002G133300 Sobic002G133300 Sobic009G084900--Sobic002G133300 Sobic006G077200 Sobic006G077200 Sobic009G084900--Sobic006G077200 Sobic008G082500 Sobic008G082500 Sobic009G084900--Sobic008G082500 Sobic004G260100 Sobic004G260100 Sobic009G084900--Sobic004G260100 Sobic008G173100 Sobic008G173100 Sobic002G063900--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic002G063900--Sobic006G116100 Sobic002G063900--Sobic004G357100 Sobic002G260400 Sobic002G260400 Sobic002G063900--Sobic002G260400 Sobic007G090430 Sobic007G090430 Sobic002G063900--Sobic007G090430 Sobic002G063900--Sobic004G246100 Sobic002G278000 Sobic002G278000 Sobic002G063900--Sobic002G278000 Sobic008G149800 Sobic008G149800 Sobic002G063900--Sobic008G149800 Sobic002G063900--SobicK028600 Sobic004G246100--Sobic008G149800 Sobic008G153000 Sobic008G153000 Sobic004G246100--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic004G246100--Sobic007G061700 Sobic004G246100--Sobic002G063900 Sobic004G246100--Sobic008G173100 Sobic004G246100--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic004G246100--Sobic006G046700 Sobic009G137100 Sobic009G137100 Sobic004G246100--Sobic009G137100 Sobic004G246100--Sobic002G260400 Sobic006G086600 Sobic006G086600 Sobic001G145400--Sobic006G086600 Sobic001G035200 Sobic001G035200 Sobic001G145400--Sobic001G035200 Sobic001G145400--Sobic010G059500 Sobic001G145400--Sobic006G077200 Sobic001G145400--Sobic003G405500 Sobic010G007100 Sobic010G007100 Sobic001G145400--Sobic010G007100 Sobic004G340400 Sobic004G340400 Sobic001G145400--Sobic004G340400 Sobic001G145400--Sobic009G084900 Sobic004G085000 Sobic004G085000 Sobic001G145400--Sobic004G085000
Octagon: transcription factors


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