Gene annotation
Transcriptome id Sobic.004G236800.1
Synonym MAG2, Sb04g027920
Functional annotation MAG2, putative, expressed
UniProt C5XYS3
Pfam PF04437
Panther DB PTHR13520 PTHR13520:SF1
NCBI CDD KOG2218; ER to golgi transport protein/RAD50-interacting protein 1
KEGG Orthology -
Gene Ontology GO:0005783; endoplasmic reticulum


Orthologs (automatic annotation)
TAIR AT3G47700 : RINT-1 / TIP-1 family
RAP-DB (Rice) LOC_Os02g51330.1 : MAG2, putative, expressed
MaizeGDB (Corn) Zm00025a022098
Brachypodium KQK01929
Barley HORVU6Hr1G075600.10 , HORVU6Hr1G075600.11 , HORVU6Hr1G075600.2 , HORVU6Hr1G075600.3 , HORVU6Hr1G075600.1 , HORVU6Hr1G075600.6 , HORVU6Hr1G075600.7 , HORVU6Hr1G075600.4 , HORVU6Hr1G075600.5 , HORVU6Hr1G075600.8 , HORVU6Hr1G075600.9
Wheat TraesCS6D02G285200 , TraesCS6B02G334400
Populus -


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cDNA sequences
Sobic.004G236800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G141800 expressed protein -
2 Sobic.002G430300 HEAT repeat family protein, putative, expressed K06100: symplekin
3 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
4 Sobic.003G152400 WD domain containing protein, putative, expressed K17601: WD repeat-containing protein 81
5 Sobic.002G063900 zinc ion binding protein, putative, expressed -
6 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
7 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
8 Sobic.010G187600 26S protease regulatory subunit S10B, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
9 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
10 Sobic.004G357100 expressed protein -
11 Sobic.001G214600 expressed protein -
12 Sobic.008G054600 splicing factor, putative, expressed -
13 Sobic.001G393700 expressed protein -
14 Sobic.003G074200 actin, putative, expressed K11672: ACTR5, ARP5, actin-related protein 5
15 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -
16 Sobic.001G035200 ThiF family domain containing protein, putative, expressed K04532: NAE1, amyloid beta precursor protein binding protein 1
17 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
18 Sobic.006G166200 Alg9-like mannosyltransferase protein, putative, expressed K03847: alpha-1,6-mannosyltransferase
19 Sobic.009G084900 expressed protein -
20 Sobic.007G042400 HEAT repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic004G236800 Sobic004G236800 Sobic004G141800 Sobic004G141800 Sobic004G236800--Sobic004G141800 Sobic002G430300 Sobic002G430300 Sobic004G236800--Sobic002G430300 Sobic003G405500 Sobic003G405500 Sobic004G236800--Sobic003G405500 Sobic003G152400 Sobic003G152400 Sobic004G236800--Sobic003G152400 Sobic002G063900 Sobic002G063900 Sobic004G236800--Sobic002G063900 Sobic010G278600 Sobic010G278600 Sobic004G236800--Sobic010G278600 Sobic004G246100 Sobic004G246100 Sobic004G236800--Sobic004G246100 Sobic010G187600 Sobic010G187600 Sobic004G236800--Sobic010G187600 Sobic001G145400 Sobic001G145400 Sobic004G236800--Sobic001G145400 Sobic004G141800--Sobic002G430300 Sobic004G141800--Sobic003G405500 Sobic004G141800--Sobic004G236800 Sobic002G227500 Sobic002G227500 Sobic004G141800--Sobic002G227500 Sobic001G030000 Sobic001G030000 Sobic004G141800--Sobic001G030000 Sobic003G143800 Sobic003G143800 Sobic004G141800--Sobic003G143800 Sobic003G312700 Sobic003G312700 Sobic004G141800--Sobic003G312700 Sobic001G035200 Sobic001G035200 Sobic004G141800--Sobic001G035200 Sobic002G386600 Sobic002G386600 Sobic004G141800--Sobic002G386600 Sobic002G430300--Sobic004G141800 Sobic001G393700 Sobic001G393700 Sobic002G430300--Sobic001G393700 Sobic002G430300--Sobic003G405500 Sobic002G430300--Sobic003G152400 Sobic002G430300--Sobic001G145400 Sobic005G133800 Sobic005G133800 Sobic002G430300--Sobic005G133800 Sobic001G087600 Sobic001G087600 Sobic002G430300--Sobic001G087600 Sobic006G224800 Sobic006G224800 Sobic002G430300--Sobic006G224800 Sobic002G145800 Sobic002G145800 Sobic002G430300--Sobic002G145800 Sobic003G405500--Sobic001G145400 Sobic008G124800 Sobic008G124800 Sobic003G405500--Sobic008G124800 Sobic003G405500--Sobic002G430300 Sobic009G084900 Sobic009G084900 Sobic003G405500--Sobic009G084900 Sobic006G166200 Sobic006G166200 Sobic003G405500--Sobic006G166200 Sobic003G405500--Sobic004G141800 Sobic006G077200 Sobic006G077200 Sobic003G405500--Sobic006G077200 Sobic010G059500 Sobic010G059500 Sobic003G405500--Sobic010G059500 Sobic003G314700 Sobic003G314700 Sobic003G405500--Sobic003G314700 Sobic004G357100 Sobic004G357100 Sobic003G152400--Sobic004G357100 Sobic007G042400 Sobic007G042400 Sobic003G152400--Sobic007G042400 Sobic003G152400--Sobic002G430300 Sobic004G223600 Sobic004G223600 Sobic003G152400--Sobic004G223600 Sobic008G098300 Sobic008G098300 Sobic003G152400--Sobic008G098300 Sobic003G152400--Sobic009G084900 Sobic003G152400--Sobic002G063900 Sobic003G152400--Sobic004G246100 Sobic003G152400--Sobic001G145400 Sobic008G173100 Sobic008G173100 Sobic002G063900--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic002G063900--Sobic006G116100 Sobic002G063900--Sobic004G357100 Sobic002G260400 Sobic002G260400 Sobic002G063900--Sobic002G260400 Sobic007G090430 Sobic007G090430 Sobic002G063900--Sobic007G090430 Sobic002G063900--Sobic004G246100 Sobic002G278000 Sobic002G278000 Sobic002G063900--Sobic002G278000 Sobic008G149800 Sobic008G149800 Sobic002G063900--Sobic008G149800 SobicK028600 SobicK028600 Sobic002G063900--SobicK028600 Sobic009G040800 Sobic009G040800 Sobic010G278600--Sobic009G040800 Sobic009G074700 Sobic009G074700 Sobic010G278600--Sobic009G074700 Sobic002G408600 Sobic002G408600 Sobic010G278600--Sobic002G408600 Sobic004G285000 Sobic004G285000 Sobic010G278600--Sobic004G285000 Sobic010G278600--Sobic004G236800 Sobic010G278600--Sobic004G246100 Sobic001G042200 Sobic001G042200 Sobic010G278600--Sobic001G042200 Sobic006G131200 Sobic006G131200 Sobic010G278600--Sobic006G131200 Sobic010G278600--Sobic001G393700 Sobic004G246100--Sobic008G149800 Sobic008G153000 Sobic008G153000 Sobic004G246100--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic004G246100--Sobic007G061700 Sobic004G246100--Sobic002G063900 Sobic004G246100--Sobic008G173100 Sobic004G246100--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic004G246100--Sobic006G046700 Sobic009G137100 Sobic009G137100 Sobic004G246100--Sobic009G137100 Sobic004G246100--Sobic002G260400 Sobic010G187600--Sobic004G236800 Sobic009G228000 Sobic009G228000 Sobic010G187600--Sobic009G228000 Sobic010G187600--Sobic006G077200 Sobic004G129300 Sobic004G129300 Sobic010G187600--Sobic004G129300 Sobic010G187600--Sobic002G063900 Sobic007G183300 Sobic007G183300 Sobic010G187600--Sobic007G183300 Sobic010G055800 Sobic010G055800 Sobic010G187600--Sobic010G055800 Sobic003G214600 Sobic003G214600 Sobic010G187600--Sobic003G214600 Sobic004G309900 Sobic004G309900 Sobic010G187600--Sobic004G309900 Sobic006G086600 Sobic006G086600 Sobic001G145400--Sobic006G086600 Sobic001G145400--Sobic001G035200 Sobic001G145400--Sobic010G059500 Sobic001G145400--Sobic006G077200 Sobic001G145400--Sobic003G405500 Sobic010G007100 Sobic010G007100 Sobic001G145400--Sobic010G007100 Sobic004G340400 Sobic004G340400 Sobic001G145400--Sobic004G340400 Sobic001G145400--Sobic009G084900 Sobic004G085000 Sobic004G085000 Sobic001G145400--Sobic004G085000
Octagon: transcription factors


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