Gene annotation
Transcriptome id Sobic.002G263700.1
Synonym Sb02g029830
Functional annotation bromodomain protein 103, putative, expressed
UniProt C5X5E2
Pfam PF01695 PF00439
Panther DB PTHR23069
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005524; ATP binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT1G05910 : cell division cycle protein 48-related / CDC48-related
RAP-DB (Rice) LOC_Os09g33980.1 : bromodomain protein 103, putative, expressed
MaizeGDB (Corn) Zm00025a009333 , Zm00025a047656 , Zm00025a058159
Brachypodium PNT64932 , KQJ91016 , KQJ91015
Barley HORVU5Hr1G078780.8 , HORVU5Hr1G078780.3 , HORVU5Hr1G078780.2 , HORVU5Hr1G078780.1 , HORVU5Hr1G078780.7 , HORVU5Hr1G078780.6 , HORVU5Hr1G078780.5 , HORVU5Hr1G078780.4
Wheat TraesCS5D02G306800 , TraesCS5A02G302000 , TraesCS5B02G299500 , TraesCS5B02G299500 , TraesCS5B02G299500 , TraesCS5B02G299500 , TraesCS5B02G299500 , TraesCS5B02G299500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -
2 Sobic.004G141800 expressed protein -
3 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
4 Sobic.004G111000 bromodomain containing protein, expressed -
5 Sobic.002G063900 zinc ion binding protein, putative, expressed -
6 Sobic.006G280100 SET domain containing protein, expressed -
7 Sobic.006G245900 FAR1 family protein, expressed -
8 Sobic.003G016500 histone-lysine N-methyltransferase ATX5, putative, expressed -
9 Sobic.004G309900 cold-induced protein, putative, expressed K13174: THO complex subunit 5
10 Sobic.006G029100 actin, putative, expressed K11673: ACTR8, ARP8, actin-related protein 8
11 Sobic.003G309050 - -
12 Sobic.007G034200 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
13 Sobic.004G043750 - K16251: DNA-directed RNA polymerase V subunit 1
14 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
15 Sobic.007G014800 RNA recognition motif containing protein, putative, expressed -
16 Sobic.009G235200 ribosomal RNA large subunit methyltransferase J, putative, expressed K14857: SPB1, AdoMet-dependent rRNA methyltransferase SPB1
17 Sobic.008G080500 expressed protein -
18 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -
19 Sobic.010G279900 PHD-finger domain containing protein, expressed -
20 Sobic.009G190200 transcription elongation factor SPT5 homolog 1, putative, expressed -


Gene co-expression network
sample Sobic002G263700 Sobic002G263700 Sobic010G269300 Sobic010G269300 Sobic002G263700--Sobic010G269300 Sobic004G141800 Sobic004G141800 Sobic002G263700--Sobic004G141800 Sobic004G285000 Sobic004G285000 Sobic002G263700--Sobic004G285000 Sobic004G111000 Sobic004G111000 Sobic002G263700--Sobic004G111000 Sobic002G063900 Sobic002G063900 Sobic002G263700--Sobic002G063900 Sobic006G280100 Sobic006G280100 Sobic002G263700--Sobic006G280100 Sobic006G245900 Sobic006G245900 Sobic002G263700--Sobic006G245900 Sobic003G016500 Sobic003G016500 Sobic002G263700--Sobic003G016500 Sobic004G309900 Sobic004G309900 Sobic002G263700--Sobic004G309900 Sobic007G125700 Sobic007G125700 Sobic010G269300--Sobic007G125700 Sobic002G430900 Sobic002G430900 Sobic010G269300--Sobic002G430900 Sobic010G269300--Sobic002G263700 Sobic001G123600 Sobic001G123600 Sobic010G269300--Sobic001G123600 Sobic003G360300 Sobic003G360300 Sobic010G269300--Sobic003G360300 Sobic008G080500 Sobic008G080500 Sobic010G269300--Sobic008G080500 Sobic010G236200 Sobic010G236200 Sobic010G269300--Sobic010G236200 Sobic010G279900 Sobic010G279900 Sobic010G269300--Sobic010G279900 Sobic009G032200 Sobic009G032200 Sobic010G269300--Sobic009G032200 Sobic002G430300 Sobic002G430300 Sobic004G141800--Sobic002G430300 Sobic003G405500 Sobic003G405500 Sobic004G141800--Sobic003G405500 Sobic004G236800 Sobic004G236800 Sobic004G141800--Sobic004G236800 Sobic002G227500 Sobic002G227500 Sobic004G141800--Sobic002G227500 Sobic001G030000 Sobic001G030000 Sobic004G141800--Sobic001G030000 Sobic003G143800 Sobic003G143800 Sobic004G141800--Sobic003G143800 Sobic003G312700 Sobic003G312700 Sobic004G141800--Sobic003G312700 Sobic001G035200 Sobic001G035200 Sobic004G141800--Sobic001G035200 Sobic002G386600 Sobic002G386600 Sobic004G141800--Sobic002G386600 Sobic004G086200 Sobic004G086200 Sobic004G285000--Sobic004G086200 Sobic004G285000--Sobic004G111000 Sobic001G346900 Sobic001G346900 Sobic004G285000--Sobic001G346900 Sobic003G427100 Sobic003G427100 Sobic004G285000--Sobic003G427100 Sobic009G151200 Sobic009G151200 Sobic004G285000--Sobic009G151200 Sobic010G215900 Sobic010G215900 Sobic004G285000--Sobic010G215900 Sobic003G409200 Sobic003G409200 Sobic004G285000--Sobic003G409200 Sobic007G044100 Sobic007G044100 Sobic004G285000--Sobic007G044100 Sobic001G013300 Sobic001G013300 Sobic004G285000--Sobic001G013300 Sobic004G111000--Sobic004G285000 Sobic004G111000--Sobic003G409200 Sobic004G111000--Sobic010G215900 Sobic004G111000--Sobic007G044100 Sobic004G111000--Sobic010G279900 Sobic004G043750 Sobic004G043750 Sobic004G111000--Sobic004G043750 Sobic006G056000 Sobic006G056000 Sobic004G111000--Sobic006G056000 Sobic004G111000--Sobic004G086200 Sobic004G111000--Sobic002G263700 Sobic008G173100 Sobic008G173100 Sobic002G063900--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic002G063900--Sobic006G116100 Sobic004G357100 Sobic004G357100 Sobic002G063900--Sobic004G357100 Sobic002G260400 Sobic002G260400 Sobic002G063900--Sobic002G260400 Sobic007G090430 Sobic007G090430 Sobic002G063900--Sobic007G090430 Sobic004G246100 Sobic004G246100 Sobic002G063900--Sobic004G246100 Sobic002G278000 Sobic002G278000 Sobic002G063900--Sobic002G278000 Sobic008G149800 Sobic008G149800 Sobic002G063900--Sobic008G149800 SobicK028600 SobicK028600 Sobic002G063900--SobicK028600 Sobic009G190200 Sobic009G190200 Sobic006G280100--Sobic009G190200 Sobic002G219900 Sobic002G219900 Sobic006G280100--Sobic002G219900 Sobic006G280100--Sobic004G043750 Sobic004G038100 Sobic004G038100 Sobic006G280100--Sobic004G038100 Sobic007G159200 Sobic007G159200 Sobic006G280100--Sobic007G159200 Sobic003G135500 Sobic003G135500 Sobic006G280100--Sobic003G135500 Sobic006G280100--Sobic007G125700 Sobic002G079100 Sobic002G079100 Sobic006G280100--Sobic002G079100 Sobic006G280100--Sobic008G080500 Sobic002G371600 Sobic002G371600 Sobic006G245900--Sobic002G371600 Sobic002G296400 Sobic002G296400 Sobic006G245900--Sobic002G296400 Sobic004G031300 Sobic004G031300 Sobic006G245900--Sobic004G031300 Sobic007G016900 Sobic007G016900 Sobic006G245900--Sobic007G016900 Sobic002G292800 Sobic002G292800 Sobic006G245900--Sobic002G292800 Sobic007G145400 Sobic007G145400 Sobic006G245900--Sobic007G145400 Sobic002G252100 Sobic002G252100 Sobic006G245900--Sobic002G252100 Sobic003G308500 Sobic003G308500 Sobic006G245900--Sobic003G308500 Sobic006G245900--Sobic001G346900 Sobic010G070600 Sobic010G070600 Sobic003G016500--Sobic010G070600 Sobic003G299500 Sobic003G299500 Sobic003G016500--Sobic003G299500 Sobic008G092800 Sobic008G092800 Sobic003G016500--Sobic008G092800 Sobic003G016500--Sobic008G080500 Sobic002G119600 Sobic002G119600 Sobic003G016500--Sobic002G119600 Sobic007G034200 Sobic007G034200 Sobic003G016500--Sobic007G034200 Sobic003G124600 Sobic003G124600 Sobic003G016500--Sobic003G124600 Sobic004G106250 Sobic004G106250 Sobic003G016500--Sobic004G106250 Sobic008G140700 Sobic008G140700 Sobic003G016500--Sobic008G140700 Sobic003G133900 Sobic003G133900 Sobic004G309900--Sobic003G133900 Sobic007G183900 Sobic007G183900 Sobic004G309900--Sobic007G183900 Sobic003G062300 Sobic003G062300 Sobic004G309900--Sobic003G062300 Sobic006G077200 Sobic006G077200 Sobic004G309900--Sobic006G077200 Sobic004G096400 Sobic004G096400 Sobic004G309900--Sobic004G096400 Sobic002G366400 Sobic002G366400 Sobic004G309900--Sobic002G366400 Sobic006G210000 Sobic006G210000 Sobic004G309900--Sobic006G210000 Sobic003G416700 Sobic003G416700 Sobic004G309900--Sobic003G416700 Sobic001G008200 Sobic001G008200 Sobic004G309900--Sobic001G008200
Octagon: transcription factors


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