Gene annotation
Transcriptome id Sobic.006G245900.1
Synonym Sb06g031160, FRS6
Functional annotation FAR1 family protein, expressed
UniProt A0A1Z5RFV5
Pfam PF04434 PF10551 PF03101
Panther DB PTHR31669 PTHR31669:SF58
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G15090 : FRS (FAR1 Related Sequences) transcription factor family
RAP-DB (Rice) LOC_Os07g31420.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium KQK16134 , KQK16135 , KQK16133
Barley HORVU7Hr1G097890.10 , HORVU7Hr1G097890.11 , HORVU7Hr1G097890.12 , HORVU7Hr1G097890.13 , HORVU7Hr1G097890.14 , HORVU7Hr1G097890.15 , HORVU7Hr1G097890.16 , HORVU7Hr1G097890.8 , HORVU7Hr1G097890.9 , HORVU7Hr1G097890.2 , HORVU7Hr1G097890.3 , HORVU7Hr1G097890.1 , HORVU7Hr1G097890.6 , HORVU7Hr1G097890.7 , HORVU7Hr1G097890.4 , HORVU7Hr1G097890.5
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G371600 Spc97 / Spc98 family protein, putative, expressed K16572: TUBGCP5, gamma-tubulin complex component 5
2 Sobic.002G296400 E3 ubiquitin-protein ligase HERC2, putative, expressed -
3 Sobic.004G031300 PPR repeat domain containing protein, putative, expressed -
4 Sobic.007G016900 OsFBL26 - F-box domain and LRR containing protein, expressed -
5 Sobic.002G292800 MORN repeat domain containing protein, expressed -
6 Sobic.007G145400 expressed protein -
7 Sobic.002G252100 methyl-binding domain protein MBD, putative, expressed -
8 Sobic.003G308500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed -
9 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase
10 Sobic.003G309050 - -
11 Sobic.001G308400 expressed protein -
12 Sobic.003G299500 expressed protein -
13 Sobic.001G393900 FAD binding domain containing protein, expressed -
14 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
15 Sobic.003G052800 RST1, putative, expressed -
16 Sobic.003G043000 expressed protein -
17 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
18 Sobic.002G063900 zinc ion binding protein, putative, expressed -
19 Sobic.006G125500 expressed protein -
20 Sobic.010G262100 expressed protein -


Gene co-expression network
sample Sobic006G245900 Sobic006G245900 Sobic002G371600 Sobic002G371600 Sobic006G245900--Sobic002G371600 Sobic002G296400 Sobic002G296400 Sobic006G245900--Sobic002G296400 Sobic004G031300 Sobic004G031300 Sobic006G245900--Sobic004G031300 Sobic007G016900 Sobic007G016900 Sobic006G245900--Sobic007G016900 Sobic002G292800 Sobic002G292800 Sobic006G245900--Sobic002G292800 Sobic007G145400 Sobic007G145400 Sobic006G245900--Sobic007G145400 Sobic002G252100 Sobic002G252100 Sobic006G245900--Sobic002G252100 Sobic003G308500 Sobic003G308500 Sobic006G245900--Sobic003G308500 Sobic001G346900 Sobic001G346900 Sobic006G245900--Sobic001G346900 Sobic001G373800 Sobic001G373800 Sobic002G371600--Sobic001G373800 Sobic006G029100 Sobic006G029100 Sobic002G371600--Sobic006G029100 Sobic002G371600--Sobic006G245900 Sobic004G356200 Sobic004G356200 Sobic002G371600--Sobic004G356200 Sobic002G371600--Sobic003G308500 Sobic002G160700 Sobic002G160700 Sobic002G371600--Sobic002G160700 Sobic003G052800 Sobic003G052800 Sobic002G371600--Sobic003G052800 Sobic001G451300 Sobic001G451300 Sobic002G371600--Sobic001G451300 Sobic010G262100 Sobic010G262100 Sobic002G371600--Sobic010G262100 Sobic006G191200 Sobic006G191200 Sobic002G296400--Sobic006G191200 Sobic002G296400--Sobic006G245900 Sobic002G363800 Sobic002G363800 Sobic002G296400--Sobic002G363800 Sobic003G113300 Sobic003G113300 Sobic002G296400--Sobic003G113300 Sobic001G308400 Sobic001G308400 Sobic002G296400--Sobic001G308400 Sobic009G008200 Sobic009G008200 Sobic002G296400--Sobic009G008200 Sobic003G256800 Sobic003G256800 Sobic002G296400--Sobic003G256800 Sobic002G066800 Sobic002G066800 Sobic002G296400--Sobic002G066800 Sobic001G123600 Sobic001G123600 Sobic002G296400--Sobic001G123600 Sobic001G004100 Sobic001G004100 Sobic004G031300--Sobic001G004100 Sobic004G031300--Sobic006G245900 Sobic004G031300--Sobic006G191200 Sobic005G000300 Sobic005G000300 Sobic004G031300--Sobic005G000300 Sobic006G125500 Sobic006G125500 Sobic004G031300--Sobic006G125500 Sobic004G031300--Sobic002G296400 Sobic006G002800 Sobic006G002800 Sobic004G031300--Sobic006G002800 Sobic004G031300--Sobic003G308500 Sobic002G381900 Sobic002G381900 Sobic004G031300--Sobic002G381900 Sobic007G016900--Sobic006G245900 Sobic007G187600 Sobic007G187600 Sobic007G016900--Sobic007G187600 Sobic003G413100 Sobic003G413100 Sobic007G016900--Sobic003G413100 Sobic003G010900 Sobic003G010900 Sobic007G016900--Sobic003G010900 Sobic004G345400 Sobic004G345400 Sobic007G016900--Sobic004G345400 Sobic001G042200 Sobic001G042200 Sobic007G016900--Sobic001G042200 Sobic002G343200 Sobic002G343200 Sobic007G016900--Sobic002G343200 Sobic007G016900--Sobic003G113300 Sobic009G040800 Sobic009G040800 Sobic007G016900--Sobic009G040800 Sobic004G097900 Sobic004G097900 Sobic002G292800--Sobic004G097900 Sobic002G292800--Sobic006G245900 Sobic002G079100 Sobic002G079100 Sobic002G292800--Sobic002G079100 Sobic002G386900 Sobic002G386900 Sobic002G292800--Sobic002G386900 Sobic002G292800--Sobic006G191200 Sobic002G063900 Sobic002G063900 Sobic002G292800--Sobic002G063900 Sobic003G124600 Sobic003G124600 Sobic002G292800--Sobic003G124600 Sobic006G170900 Sobic006G170900 Sobic002G292800--Sobic006G170900 Sobic001G495400 Sobic001G495400 Sobic002G292800--Sobic001G495400 Sobic001G474400 Sobic001G474400 Sobic007G145400--Sobic001G474400 Sobic009G003700 Sobic009G003700 Sobic007G145400--Sobic009G003700 Sobic001G248100 Sobic001G248100 Sobic007G145400--Sobic001G248100 Sobic002G119600 Sobic002G119600 Sobic007G145400--Sobic002G119600 Sobic006G261400 Sobic006G261400 Sobic007G145400--Sobic006G261400 Sobic003G314700 Sobic003G314700 Sobic007G145400--Sobic003G314700 Sobic001G467100 Sobic001G467100 Sobic007G145400--Sobic001G467100 Sobic008G092800 Sobic008G092800 Sobic007G145400--Sobic008G092800 Sobic007G145400--Sobic006G245900 Sobic002G252100--Sobic006G245900 Sobic003G123100 Sobic003G123100 Sobic002G252100--Sobic003G123100 Sobic001G239800 Sobic001G239800 Sobic002G252100--Sobic001G239800 Sobic002G252100--Sobic001G346900 Sobic002G252100--Sobic002G371600 Sobic006G270600 Sobic006G270600 Sobic002G252100--Sobic006G270600 Sobic001G098400 Sobic001G098400 Sobic002G252100--Sobic001G098400 Sobic004G315500 Sobic004G315500 Sobic002G252100--Sobic004G315500 Sobic007G014800 Sobic007G014800 Sobic002G252100--Sobic007G014800 Sobic003G146600 Sobic003G146600 Sobic003G308500--Sobic003G146600 Sobic003G308500--Sobic006G125500 Sobic003G296900 Sobic003G296900 Sobic003G308500--Sobic003G296900 Sobic003G308500--Sobic006G002800 Sobic004G019200 Sobic004G019200 Sobic003G308500--Sobic004G019200 Sobic003G308500--Sobic002G371600 Sobic003G012000 Sobic003G012000 Sobic003G308500--Sobic003G012000 Sobic001G145400 Sobic001G145400 Sobic003G308500--Sobic001G145400 Sobic003G308500--Sobic006G245900 Sobic004G086200 Sobic004G086200 Sobic001G346900--Sobic004G086200 Sobic003G409200 Sobic003G409200 Sobic001G346900--Sobic003G409200 Sobic001G134300 Sobic001G134300 Sobic001G346900--Sobic001G134300 Sobic003G042400 Sobic003G042400 Sobic001G346900--Sobic003G042400 Sobic008G147200 Sobic008G147200 Sobic001G346900--Sobic008G147200 Sobic004G285000 Sobic004G285000 Sobic001G346900--Sobic004G285000 Sobic003G416700 Sobic003G416700 Sobic001G346900--Sobic003G416700 Sobic010G096000 Sobic010G096000 Sobic001G346900--Sobic010G096000 Sobic002G422100 Sobic002G422100 Sobic001G346900--Sobic002G422100
Octagon: transcription factors


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