Gene annotation
Transcriptome id Sobic.002G079100.1,Sobic.002G079100.2
Synonym SUVH1, Sb02g006620
Functional annotation histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed
UniProt C5XDD8
Pfam PF05033 PF00856 PF02182
Panther DB PTHR22884 PTHR22884:SF360
NCBI CDD KOG1082; Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
KEGG Orthology K11420; [histone H3]-lysine9 N-trimethyltransferase EHMT
Gene Ontology GO:0018024; histone-lysine N-methyltransferase activity GO:0008270zinc ion binding GO:0005634nucleus GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT5G04940 : SU(VAR)3-9 homolog 1
RAP-DB (Rice) LOC_Os11g38900.1 : histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed
MaizeGDB (Corn) Zm00025a045420
Brachypodium KQK20326
Barley HORVU4Hr1G074120.10 , HORVU4Hr1G074120.8 , HORVU4Hr1G074120.9 , HORVU4Hr1G074120.6 , HORVU4Hr1G074120.7 , HORVU4Hr1G074120.4 , HORVU4Hr1G074120.5 , HORVU4Hr1G074120.2 , HORVU4Hr1G074120.3 , HORVU4Hr1G074120.1
Wheat TraesCS3A02G385200 , TraesCS4B02G280000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G124600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
2 Sobic.001G448100 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
3 Sobic.008G017100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
4 Sobic.008G080500 expressed protein -
5 Sobic.002G380100 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
6 Sobic.002G292800 MORN repeat domain containing protein, expressed -
7 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
8 Sobic.006G245900 FAR1 family protein, expressed -
9 Sobic.001G482200 FAR1 family protein, expressed K17604: zinc finger SWIM domain-containing protein 3
10 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
11 Sobic.006G280100 SET domain containing protein, expressed -
12 Sobic.003G299500 expressed protein -
13 Sobic.001G315400 expressed protein -
14 Sobic.006G056000 OsFBL16 - F-box domain and LRR containing protein, expressed -
15 Sobic.006G131200 DNA-directed RNA polymerase III subunit RPC1, putative, expressed K03018: RPC1, DNA-directed RNA polymerase III subunit RPC1
16 Sobic.002G235900 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
17 Sobic.003G218700 LSD1 zinc finger domain containing protein, expressed -
18 Sobic.002G148400 histone-lysine N-methyltransferase, H3 lysine-4 specific ATX1, putative, expressed -
19 Sobic.001G453500 expressed protein -
20 Sobic.004G007900 SNF2 family N-terminal domain containing protein, expressed K11643: CHD4, chromodomain-helicase-DNA-binding protein 4


Gene co-expression network
sample Sobic002G079100 Sobic002G079100 Sobic003G124600 Sobic003G124600 Sobic002G079100--Sobic003G124600 Sobic001G448100 Sobic001G448100 Sobic002G079100--Sobic001G448100 Sobic008G017100 Sobic008G017100 Sobic002G079100--Sobic008G017100 Sobic008G080500 Sobic008G080500 Sobic002G079100--Sobic008G080500 Sobic002G380100 Sobic002G380100 Sobic002G079100--Sobic002G380100 Sobic002G292800 Sobic002G292800 Sobic002G079100--Sobic002G292800 Sobic010G278600 Sobic010G278600 Sobic002G079100--Sobic010G278600 Sobic006G245900 Sobic006G245900 Sobic002G079100--Sobic006G245900 Sobic001G482200 Sobic001G482200 Sobic002G079100--Sobic001G482200 Sobic003G124600--Sobic002G079100 Sobic006G170900 Sobic006G170900 Sobic003G124600--Sobic006G170900 Sobic003G124600--Sobic002G292800 Sobic003G016500 Sobic003G016500 Sobic003G124600--Sobic003G016500 Sobic003G299500 Sobic003G299500 Sobic003G124600--Sobic003G299500 Sobic007G034200 Sobic007G034200 Sobic003G124600--Sobic007G034200 Sobic009G102000 Sobic009G102000 Sobic003G124600--Sobic009G102000 Sobic003G113300 Sobic003G113300 Sobic003G124600--Sobic003G113300 Sobic001G424600 Sobic001G424600 Sobic003G124600--Sobic001G424600 Sobic001G448100--Sobic002G079100 Sobic003G397100 Sobic003G397100 Sobic001G448100--Sobic003G397100 Sobic004G007900 Sobic004G007900 Sobic001G448100--Sobic004G007900 Sobic002G235900 Sobic002G235900 Sobic001G448100--Sobic002G235900 Sobic001G448100--Sobic002G380100 Sobic009G154900 Sobic009G154900 Sobic001G448100--Sobic009G154900 Sobic001G522400 Sobic001G522400 Sobic001G448100--Sobic001G522400 Sobic009G000400 Sobic009G000400 Sobic001G448100--Sobic009G000400 Sobic003G067201 Sobic003G067201 Sobic001G448100--Sobic003G067201 Sobic004G119400 Sobic004G119400 Sobic008G017100--Sobic004G119400 Sobic006G269800 Sobic006G269800 Sobic008G017100--Sobic006G269800 Sobic010G224700 Sobic010G224700 Sobic008G017100--Sobic010G224700 Sobic006G185200 Sobic006G185200 Sobic008G017100--Sobic006G185200 Sobic008G017100--Sobic002G079100 Sobic002G378100 Sobic002G378100 Sobic008G017100--Sobic002G378100 Sobic004G351800 Sobic004G351800 Sobic008G017100--Sobic004G351800 Sobic007G171100 Sobic007G171100 Sobic008G017100--Sobic007G171100 Sobic008G147200 Sobic008G147200 Sobic008G017100--Sobic008G147200 Sobic007G159200 Sobic007G159200 Sobic008G080500--Sobic007G159200 Sobic010G262100 Sobic010G262100 Sobic008G080500--Sobic010G262100 Sobic004G355800 Sobic004G355800 Sobic008G080500--Sobic004G355800 Sobic006G112700 Sobic006G112700 Sobic008G080500--Sobic006G112700 Sobic008G080500--Sobic002G079100 Sobic005G200900 Sobic005G200900 Sobic008G080500--Sobic005G200900 Sobic010G269300 Sobic010G269300 Sobic008G080500--Sobic010G269300 Sobic008G080500--Sobic003G299500 Sobic008G080500--Sobic002G235900 Sobic002G380100--Sobic002G079100 Sobic002G380100--Sobic004G119400 Sobic002G380100--Sobic008G017100 Sobic006G111200 Sobic006G111200 Sobic002G380100--Sobic006G111200 Sobic002G380100--Sobic001G448100 Sobic003G185250 Sobic003G185250 Sobic002G380100--Sobic003G185250 Sobic003G070100 Sobic003G070100 Sobic002G380100--Sobic003G070100 Sobic010G050700 Sobic010G050700 Sobic002G380100--Sobic010G050700 Sobic009G096100 Sobic009G096100 Sobic002G380100--Sobic009G096100 Sobic004G097900 Sobic004G097900 Sobic002G292800--Sobic004G097900 Sobic002G292800--Sobic006G245900 Sobic002G292800--Sobic002G079100 Sobic002G386900 Sobic002G386900 Sobic002G292800--Sobic002G386900 Sobic006G191200 Sobic006G191200 Sobic002G292800--Sobic006G191200 Sobic002G063900 Sobic002G063900 Sobic002G292800--Sobic002G063900 Sobic002G292800--Sobic003G124600 Sobic002G292800--Sobic006G170900 Sobic001G495400 Sobic001G495400 Sobic002G292800--Sobic001G495400 Sobic009G040800 Sobic009G040800 Sobic010G278600--Sobic009G040800 Sobic009G074700 Sobic009G074700 Sobic010G278600--Sobic009G074700 Sobic002G408600 Sobic002G408600 Sobic010G278600--Sobic002G408600 Sobic004G285000 Sobic004G285000 Sobic010G278600--Sobic004G285000 Sobic004G236800 Sobic004G236800 Sobic010G278600--Sobic004G236800 Sobic004G246100 Sobic004G246100 Sobic010G278600--Sobic004G246100 Sobic001G042200 Sobic001G042200 Sobic010G278600--Sobic001G042200 Sobic006G131200 Sobic006G131200 Sobic010G278600--Sobic006G131200 Sobic001G393700 Sobic001G393700 Sobic010G278600--Sobic001G393700 Sobic002G371600 Sobic002G371600 Sobic006G245900--Sobic002G371600 Sobic002G296400 Sobic002G296400 Sobic006G245900--Sobic002G296400 Sobic004G031300 Sobic004G031300 Sobic006G245900--Sobic004G031300 Sobic007G016900 Sobic007G016900 Sobic006G245900--Sobic007G016900 Sobic006G245900--Sobic002G292800 Sobic007G145400 Sobic007G145400 Sobic006G245900--Sobic007G145400 Sobic002G252100 Sobic002G252100 Sobic006G245900--Sobic002G252100 Sobic003G308500 Sobic003G308500 Sobic006G245900--Sobic003G308500 Sobic001G346900 Sobic001G346900 Sobic006G245900--Sobic001G346900 Sobic001G482200--Sobic002G079100 Sobic002G148400 Sobic002G148400 Sobic001G482200--Sobic002G148400 Sobic006G280100 Sobic006G280100 Sobic001G482200--Sobic006G280100 Sobic009G107080 Sobic009G107080 Sobic001G482200--Sobic009G107080 Sobic001G482200--Sobic002G380100 Sobic001G482200--Sobic003G124600 Sobic001G482200--Sobic008G080500 Sobic010G138900 Sobic010G138900 Sobic001G482200--Sobic010G138900 Sobic008G088842 Sobic008G088842 Sobic001G482200--Sobic008G088842
Octagon: transcription factors


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