Gene annotation
Transcriptome id Sobic.001G315400.1,Sobic.001G315400.3,Sobic.001G315400.2
Synonym Sb01g030650
Functional annotation expressed protein
UniProt A0A1Z5S8U3 , C5WUF7
Pfam -
Panther DB PTHR33831 PTHR33831:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30700 : -
RAP-DB (Rice) LOC_Os10g38980.2 : expressed protein
MaizeGDB (Corn) Zm00025a003136
Brachypodium KQJ97579 , KQJ97578 , PNT67771 , PNT67770
Barley HORVU1Hr1G049590.8 , HORVU1Hr1G049590.9 , HORVU1Hr1G049590.6 , HORVU1Hr1G049590.7 , HORVU1Hr1G049590.4 , HORVU1Hr1G049590.5 , HORVU1Hr1G049590.2 , HORVU1Hr1G049590.3 , HORVU1Hr1G049590.1 , HORVU1Hr1G049590.14 , HORVU1Hr1G049590.10 , HORVU1Hr1G049590.11 , HORVU1Hr1G049590.12 , HORVU1Hr1G049590.13
Wheat TraesCS1D02G192500 , TraesCS1D02G192500 , TraesCS1D02G192500 , TraesCS1B02G205600 , TraesCS1B02G205600 , TraesCS1B02G205600 , TraesCS1A02G184100 , TraesCS1A02G184100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G367100 pleckstrin homology domain-containing protein, putative, expressed -
2 Sobic.003G077500 expressed protein -
3 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
4 Sobic.002G002100 expressed protein -
5 Sobic.005G047300 OsFBT13 - F-box and tubby domain containing protein, expressed -
6 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
7 Sobic.004G128200 Probable LRR receptor-like serine/threonine-protein kinase At5g10290(PubMedID : 31721651)@BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
8 Sobic.004G227500 WD-40 repeat family protein, putative, expressed -
9 Sobic.001G395200 cyclin-related protein, putative, expressed -
10 Sobic.001G018100 "qTGW3/GL3.3/TGW3(Ortholog in rice:Hu et al., 2018/Xia et al., 2018/Ying et al., 2018 )"(PubMedID : 31659830)@CGMC_GSK.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
11 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
12 Sobic.002G341200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STRUBBELIG-RECEPTOR FAMILY 1 precursor, putative, expressed -
13 Sobic.006G140600 HEAT repeat family protein, putative, expressed K16578: CLIP-associating protein 1/2
14 Sobic.001G385400 guanine nucleotide exchange factor, putative, expressed -
15 Sobic.009G044900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitgamma, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
16 Sobic.001G226000 WD domain, G-beta repeat domain containing protein, expressed K10599: PRPF19, pre-mRNA-processing factor 19
17 Sobic.002G380100 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
18 Sobic.003G106000 TKL_IRAK_C-LEC.1 - TKL_IRAK_C-LEC has homology to C-type lectin receptors, expressed -
19 Sobic.002G294900 H-BTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
20 Sobic.007G125700 NHL repeat-containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G315400 Sobic001G315400 Sobic001G367100 Sobic001G367100 Sobic001G315400--Sobic001G367100 Sobic003G077500 Sobic003G077500 Sobic001G315400--Sobic003G077500 Sobic002G079100 Sobic002G079100 Sobic001G315400--Sobic002G079100 Sobic002G002100 Sobic002G002100 Sobic001G315400--Sobic002G002100 Sobic005G047300 Sobic005G047300 Sobic001G315400--Sobic005G047300 Sobic002G223300 Sobic002G223300 Sobic001G315400--Sobic002G223300 Sobic004G128200 Sobic004G128200 Sobic001G315400--Sobic004G128200 Sobic004G227500 Sobic004G227500 Sobic001G315400--Sobic004G227500 Sobic001G395200 Sobic001G395200 Sobic001G315400--Sobic001G395200 Sobic010G279900 Sobic010G279900 Sobic001G367100--Sobic010G279900 Sobic001G367100--Sobic001G315400 Sobic001G245900 Sobic001G245900 Sobic001G367100--Sobic001G245900 Sobic003G023400 Sobic003G023400 Sobic001G367100--Sobic003G023400 Sobic008G080500 Sobic008G080500 Sobic001G367100--Sobic008G080500 Sobic009G151200 Sobic009G151200 Sobic001G367100--Sobic009G151200 Sobic001G367100--Sobic004G128200 Sobic001G367100--Sobic002G079100 Sobic001G367100--Sobic003G077500 Sobic003G077500--Sobic001G315400 Sobic007G125700 Sobic007G125700 Sobic003G077500--Sobic007G125700 Sobic001G372900 Sobic001G372900 Sobic003G077500--Sobic001G372900 Sobic002G334600 Sobic002G334600 Sobic003G077500--Sobic002G334600 Sobic002G219900 Sobic002G219900 Sobic003G077500--Sobic002G219900 Sobic006G254500 Sobic006G254500 Sobic003G077500--Sobic006G254500 Sobic003G077500--Sobic001G367100 Sobic004G315700 Sobic004G315700 Sobic003G077500--Sobic004G315700 Sobic009G031500 Sobic009G031500 Sobic003G077500--Sobic009G031500 Sobic003G124600 Sobic003G124600 Sobic002G079100--Sobic003G124600 Sobic001G448100 Sobic001G448100 Sobic002G079100--Sobic001G448100 Sobic008G017100 Sobic008G017100 Sobic002G079100--Sobic008G017100 Sobic002G079100--Sobic008G080500 Sobic002G380100 Sobic002G380100 Sobic002G079100--Sobic002G380100 Sobic002G292800 Sobic002G292800 Sobic002G079100--Sobic002G292800 Sobic010G278600 Sobic010G278600 Sobic002G079100--Sobic010G278600 Sobic006G245900 Sobic006G245900 Sobic002G079100--Sobic006G245900 Sobic001G482200 Sobic001G482200 Sobic002G079100--Sobic001G482200 Sobic001G113800 Sobic001G113800 Sobic002G002100--Sobic001G113800 Sobic001G385400 Sobic001G385400 Sobic002G002100--Sobic001G385400 Sobic005G204100 Sobic005G204100 Sobic002G002100--Sobic005G204100 Sobic002G002100--Sobic001G315400 Sobic007G210900 Sobic007G210900 Sobic002G002100--Sobic007G210900 Sobic002G098500 Sobic002G098500 Sobic002G002100--Sobic002G098500 Sobic002G216600 Sobic002G216600 Sobic002G002100--Sobic002G216600 Sobic006G167300 Sobic006G167300 Sobic002G002100--Sobic006G167300 Sobic002G002100--Sobic001G367100 Sobic001G051700 Sobic001G051700 Sobic005G047300--Sobic001G051700 Sobic005G047300--Sobic001G315400 Sobic003G409200 Sobic003G409200 Sobic005G047300--Sobic003G409200 Sobic008G057000 Sobic008G057000 Sobic005G047300--Sobic008G057000 Sobic002G263200 Sobic002G263200 Sobic005G047300--Sobic002G263200 Sobic001G346900 Sobic001G346900 Sobic005G047300--Sobic001G346900 Sobic001G013300 Sobic001G013300 Sobic005G047300--Sobic001G013300 Sobic001G373000 Sobic001G373000 Sobic005G047300--Sobic001G373000 Sobic002G148400 Sobic002G148400 Sobic005G047300--Sobic002G148400 Sobic002G223300--Sobic002G334600 Sobic004G085300 Sobic004G085300 Sobic002G223300--Sobic004G085300 Sobic002G223300--Sobic009G151200 Sobic003G132700 Sobic003G132700 Sobic002G223300--Sobic003G132700 Sobic007G046900 Sobic007G046900 Sobic002G223300--Sobic007G046900 Sobic004G285000 Sobic004G285000 Sobic002G223300--Sobic004G285000 Sobic006G210200 Sobic006G210200 Sobic002G223300--Sobic006G210200 Sobic002G050500 Sobic002G050500 Sobic002G223300--Sobic002G050500 Sobic002G339800 Sobic002G339800 Sobic002G223300--Sobic002G339800 Sobic005G199200 Sobic005G199200 Sobic004G128200--Sobic005G199200 Sobic004G128200--Sobic001G367100 Sobic004G128200--Sobic010G279900 Sobic004G128200--Sobic001G315400 Sobic004G128200--Sobic003G409200 Sobic001G090300 Sobic001G090300 Sobic004G128200--Sobic001G090300 Sobic002G145800 Sobic002G145800 Sobic004G128200--Sobic002G145800 Sobic007G183300 Sobic007G183300 Sobic004G128200--Sobic007G183300 Sobic004G128200--Sobic008G017100 Sobic006G022500 Sobic006G022500 Sobic004G227500--Sobic006G022500 Sobic002G316500 Sobic002G316500 Sobic004G227500--Sobic002G316500 Sobic010G046400 Sobic010G046400 Sobic004G227500--Sobic010G046400 Sobic001G494100 Sobic001G494100 Sobic004G227500--Sobic001G494100 Sobic004G135500 Sobic004G135500 Sobic004G227500--Sobic004G135500 Sobic010G173900 Sobic010G173900 Sobic004G227500--Sobic010G173900 Sobic004G227500--Sobic001G315400 Sobic004G227500--Sobic001G367100 Sobic004G227500--Sobic002G334600 Sobic003G104100 Sobic003G104100 Sobic001G395200--Sobic003G104100 Sobic009G259900 Sobic009G259900 Sobic001G395200--Sobic009G259900 Sobic001G395200--Sobic002G219900 Sobic010G149600 Sobic010G149600 Sobic001G395200--Sobic010G149600 Sobic003G351900 Sobic003G351900 Sobic001G395200--Sobic003G351900 Sobic006G008300 Sobic006G008300 Sobic001G395200--Sobic006G008300 Sobic001G395200--Sobic007G125700 Sobic004G043750 Sobic004G043750 Sobic001G395200--Sobic004G043750 Sobic001G079900 Sobic001G079900 Sobic001G395200--Sobic001G079900
Octagon: transcription factors


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