Gene annotation
Transcriptome id Sobic.003G106000.1
Synonym Sb03g008900
Functional annotation TKL_IRAK_C-LEC.1 - TKL_IRAK_C-LEC has homology to C-type lectin receptors, expressed
UniProt C5XF24
Pfam PF00059 PF07714
Panther DB PTHR27006 PTHR27006:SF5
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G52310 : protein kinase family protein / C-type lectin domain-containing protein
RAP-DB (Rice) LOC_Os01g01410.1 : TKL_IRAK_C-LEC.1 - TKL_IRAK_C-LEC has homology to C-type lectin receptors, expressed
MaizeGDB (Corn) Zm00025a023843
Brachypodium KQK02755 , KQK02754
Barley HORVU3Hr1G014230.3 , HORVU3Hr1G014230.2 , HORVU3Hr1G014230.1 , HORVU3Hr1G014230.5 , HORVU3Hr1G014230.4
Wheat TraesCS3D02G079200 , TraesCS3D02G079200 , TraesCS3A02G078700 , TraesCS3A02G078700 , TraesCS3B02G093800 , TraesCS3B02G093800
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G106000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
2 Sobic.005G084100 Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(PubMedID : 31721651)@inactive receptor kinase At1g27190 precursor, putative, expressed -
3 Sobic.001G253200 mandelonitrile lyase, putative, expressed -
4 Sobic.006G056000 OsFBL16 - F-box domain and LRR containing protein, expressed -
5 Sobic.007G054400 FAR1 family protein, expressed -
6 Sobic.006G248500 expressed protein -
7 Sobic.009G151200 expressed protein -
8 Sobic.001G315400 expressed protein -
9 Sobic.005G079800 transcriptional corepressor SEUSS, putative, expressed -
10 Sobic.003G409200 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
11 Sobic.002G309200 FAR1 family protein, expressed -
12 Sobic.001G367100 pleckstrin homology domain-containing protein, putative, expressed -
13 Sobic.004G128200 Probable LRR receptor-like serine/threonine-protein kinase At5g10290(PubMedID : 31721651)@BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
14 Sobic.003G438900 FYVE zinc finger domain containing protein, expressed -
15 Sobic.010G215900 type II intron maturase protein, putative, expressed -
16 Sobic.005G133500 expressed protein -
17 Sobic.004G096500 KH domain-containing protein, putative, expressed K13210: far upstream element-binding protein
18 Sobic.003G412300 expressed protein -
19 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
20 Sobic.001G013300 SWIM zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic003G106000 Sobic003G106000 Sobic002G259800 Sobic002G259800 Sobic003G106000--Sobic002G259800 Sobic005G084100 Sobic005G084100 Sobic003G106000--Sobic005G084100 Sobic001G253200 Sobic001G253200 Sobic003G106000--Sobic001G253200 Sobic006G056000 Sobic006G056000 Sobic003G106000--Sobic006G056000 Sobic007G054400 Sobic007G054400 Sobic003G106000--Sobic007G054400 Sobic006G248500 Sobic006G248500 Sobic003G106000--Sobic006G248500 Sobic009G151200 Sobic009G151200 Sobic003G106000--Sobic009G151200 Sobic001G315400 Sobic001G315400 Sobic003G106000--Sobic001G315400 Sobic005G079800 Sobic005G079800 Sobic003G106000--Sobic005G079800 Sobic009G195200 Sobic009G195200 Sobic002G259800--Sobic009G195200 Sobic001G306900 Sobic001G306900 Sobic002G259800--Sobic001G306900 Sobic005G015900 Sobic005G015900 Sobic002G259800--Sobic005G015900 Sobic003G394300 Sobic003G394300 Sobic002G259800--Sobic003G394300 Sobic002G259800--Sobic006G248500 Sobic001G246500 Sobic001G246500 Sobic002G259800--Sobic001G246500 Sobic002G259800--Sobic005G084100 Sobic002G423200 Sobic002G423200 Sobic002G259800--Sobic002G423200 Sobic004G156500 Sobic004G156500 Sobic002G259800--Sobic004G156500 Sobic008G083000 Sobic008G083000 Sobic005G084100--Sobic008G083000 Sobic005G084100--Sobic002G259800 Sobic001G360900 Sobic001G360900 Sobic005G084100--Sobic001G360900 Sobic010G279700 Sobic010G279700 Sobic005G084100--Sobic010G279700 Sobic002G076000 Sobic002G076000 Sobic005G084100--Sobic002G076000 Sobic001G094000 Sobic001G094000 Sobic005G084100--Sobic001G094000 Sobic002G090800 Sobic002G090800 Sobic005G084100--Sobic002G090800 Sobic008G131000 Sobic008G131000 Sobic005G084100--Sobic008G131000 Sobic005G084100--Sobic006G056000 Sobic001G253200--Sobic007G054400 Sobic001G253200--Sobic005G079800 Sobic004G039200 Sobic004G039200 Sobic001G253200--Sobic004G039200 Sobic001G433300 Sobic001G433300 Sobic001G253200--Sobic001G433300 Sobic003G101500 Sobic003G101500 Sobic001G253200--Sobic003G101500 Sobic002G151600 Sobic002G151600 Sobic001G253200--Sobic002G151600 Sobic002G309800 Sobic002G309800 Sobic001G253200--Sobic002G309800 Sobic003G197800 Sobic003G197800 Sobic001G253200--Sobic003G197800 Sobic008G100100 Sobic008G100100 Sobic001G253200--Sobic008G100100 Sobic003G353600 Sobic003G353600 Sobic006G056000--Sobic003G353600 Sobic006G056000--Sobic002G076000 Sobic006G056000--Sobic005G084100 Sobic004G111000 Sobic004G111000 Sobic006G056000--Sobic004G111000 Sobic002G079100 Sobic002G079100 Sobic006G056000--Sobic002G079100 Sobic001G138400 Sobic001G138400 Sobic006G056000--Sobic001G138400 Sobic004G285000 Sobic004G285000 Sobic006G056000--Sobic004G285000 Sobic006G047100 Sobic006G047100 Sobic006G056000--Sobic006G047100 Sobic006G210000 Sobic006G210000 Sobic006G056000--Sobic006G210000 Sobic007G054400--Sobic001G253200 Sobic007G054400--Sobic004G039200 Sobic007G054400--Sobic003G101500 Sobic004G145500 Sobic004G145500 Sobic007G054400--Sobic004G145500 Sobic007G054400--Sobic003G197800 Sobic004G258700 Sobic004G258700 Sobic007G054400--Sobic004G258700 Sobic007G054400--Sobic001G433300 Sobic009G065100 Sobic009G065100 Sobic007G054400--Sobic009G065100 Sobic006G052300 Sobic006G052300 Sobic007G054400--Sobic006G052300 Sobic001G469800 Sobic001G469800 Sobic006G248500--Sobic001G469800 Sobic006G248500--Sobic002G259800 Sobic003G433500 Sobic003G433500 Sobic006G248500--Sobic003G433500 Sobic006G248500--Sobic009G151200 Sobic008G058800 Sobic008G058800 Sobic006G248500--Sobic008G058800 Sobic004G013600 Sobic004G013600 Sobic006G248500--Sobic004G013600 Sobic007G026000 Sobic007G026000 Sobic006G248500--Sobic007G026000 Sobic004G347100 Sobic004G347100 Sobic006G248500--Sobic004G347100 Sobic009G044900 Sobic009G044900 Sobic006G248500--Sobic009G044900 Sobic009G151200--Sobic006G248500 Sobic009G151200--Sobic002G259800 Sobic005G133500 Sobic005G133500 Sobic009G151200--Sobic005G133500 Sobic009G151200--Sobic004G285000 Sobic001G424600 Sobic001G424600 Sobic009G151200--Sobic001G424600 Sobic004G085300 Sobic004G085300 Sobic009G151200--Sobic004G085300 Sobic009G151200--Sobic008G100100 Sobic004G086200 Sobic004G086200 Sobic009G151200--Sobic004G086200 Sobic009G151200--Sobic004G156500 Sobic001G367100 Sobic001G367100 Sobic001G315400--Sobic001G367100 Sobic003G077500 Sobic003G077500 Sobic001G315400--Sobic003G077500 Sobic001G315400--Sobic002G079100 Sobic002G002100 Sobic002G002100 Sobic001G315400--Sobic002G002100 Sobic005G047300 Sobic005G047300 Sobic001G315400--Sobic005G047300 Sobic002G223300 Sobic002G223300 Sobic001G315400--Sobic002G223300 Sobic004G128200 Sobic004G128200 Sobic001G315400--Sobic004G128200 Sobic004G227500 Sobic004G227500 Sobic001G315400--Sobic004G227500 Sobic001G395200 Sobic001G395200 Sobic001G315400--Sobic001G395200 Sobic003G438900 Sobic003G438900 Sobic005G079800--Sobic003G438900 Sobic005G079800--Sobic001G253200 Sobic007G191700 Sobic007G191700 Sobic005G079800--Sobic007G191700 Sobic002G153700 Sobic002G153700 Sobic005G079800--Sobic002G153700 Sobic005G021500 Sobic005G021500 Sobic005G079800--Sobic005G021500 Sobic003G427100 Sobic003G427100 Sobic005G079800--Sobic003G427100 Sobic005G079800--Sobic007G054400 Sobic010G194700 Sobic010G194700 Sobic005G079800--Sobic010G194700 Sobic004G096500 Sobic004G096500 Sobic005G079800--Sobic004G096500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.