Gene annotation
Transcriptome id Sobic.003G412300.1
Synonym Sb03g044670
Functional annotation expressed protein
UniProt C5XH04
Pfam -
Panther DB PTHR31762 PTHR31762:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48860 : -
RAP-DB (Rice) LOC_Os01g70320.1 : expressed protein
MaizeGDB (Corn) Zm00025a026187
Brachypodium KQK11327
Barley HORVU3Hr1G096450.1 , HORVU3Hr1G096450.3 , HORVU3Hr1G096450.2
Wheat TraesCS3B02G476100 , TraesCS3B02G476100 , TraesCS3B02G476100 , TraesCS3B02G476100 , TraesCS3D02G435000 , TraesCS3D02G435000 , TraesCS3D02G435000 , TraesCS3A02G442300 , TraesCS3A02G442300
Populus -


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cDNA sequences
Sobic.003G412300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G027700 expressed protein -
2 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
3 Sobic.004G156500 expressed protein -
4 Sobic.001G138400 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
5 Sobic.006G252700 protein kinase domain containing protein, expressed -
6 Sobic.002G058300 ES43 protein, putative, expressed -
7 Sobic.007G054400 FAR1 family protein, expressed -
8 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
9 Sobic.002G357100 SUMO-activating enzyme subunit 2, putative, expressed K10685: UBLE1B, SAE2, ubiquitin-like 1-activating enzyme E1 B
10 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
11 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
12 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha
13 Sobic.008G100100 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
14 Sobic.005G216300 RNA recognition motif containing protein, expressed K12837: splicing factor U2AF 65 kDa subunit
15 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
16 Sobic.007G091600 proline rich protein 3, putative, expressed -
17 Sobic.003G173950 - -
18 Sobic.001G226000 WD domain, G-beta repeat domain containing protein, expressed K10599: PRPF19, pre-mRNA-processing factor 19
19 Sobic.005G110544 - -
20 Sobic.007G086500 expressed protein K16584: HAUS augmin-like complex subunit 1


Gene co-expression network
sample Sobic003G412300 Sobic003G412300 Sobic007G027700 Sobic007G027700 Sobic003G412300--Sobic007G027700 Sobic003G401100 Sobic003G401100 Sobic003G412300--Sobic003G401100 Sobic004G156500 Sobic004G156500 Sobic003G412300--Sobic004G156500 Sobic001G138400 Sobic001G138400 Sobic003G412300--Sobic001G138400 Sobic006G252700 Sobic006G252700 Sobic003G412300--Sobic006G252700 Sobic002G058300 Sobic002G058300 Sobic003G412300--Sobic002G058300 Sobic007G054400 Sobic007G054400 Sobic003G412300--Sobic007G054400 Sobic002G259800 Sobic002G259800 Sobic003G412300--Sobic002G259800 Sobic002G357100 Sobic002G357100 Sobic003G412300--Sobic002G357100 Sobic008G127400 Sobic008G127400 Sobic007G027700--Sobic008G127400 Sobic007G027700--Sobic003G401100 Sobic007G027700--Sobic003G412300 Sobic001G143500 Sobic001G143500 Sobic007G027700--Sobic001G143500 Sobic004G325400 Sobic004G325400 Sobic007G027700--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic007G027700--Sobic005G216300 Sobic001G395100 Sobic001G395100 Sobic007G027700--Sobic001G395100 Sobic010G279900 Sobic010G279900 Sobic007G027700--Sobic010G279900 Sobic006G267300 Sobic006G267300 Sobic007G027700--Sobic006G267300 Sobic010G236400 Sobic010G236400 Sobic003G401100--Sobic010G236400 Sobic004G084300 Sobic004G084300 Sobic003G401100--Sobic004G084300 Sobic001G281600 Sobic001G281600 Sobic003G401100--Sobic001G281600 Sobic003G081000 Sobic003G081000 Sobic003G401100--Sobic003G081000 Sobic003G401100--Sobic007G027700 Sobic003G401100--Sobic001G143500 Sobic007G000800 Sobic007G000800 Sobic003G401100--Sobic007G000800 Sobic004G274200 Sobic004G274200 Sobic003G401100--Sobic004G274200 Sobic003G241200 Sobic003G241200 Sobic003G401100--Sobic003G241200 Sobic008G100100 Sobic008G100100 Sobic004G156500--Sobic008G100100 Sobic010G065300 Sobic010G065300 Sobic004G156500--Sobic010G065300 Sobic001G134300 Sobic001G134300 Sobic004G156500--Sobic001G134300 Sobic001G306900 Sobic001G306900 Sobic004G156500--Sobic001G306900 Sobic006G118700 Sobic006G118700 Sobic004G156500--Sobic006G118700 Sobic006G210000 Sobic006G210000 Sobic004G156500--Sobic006G210000 Sobic003G416700 Sobic003G416700 Sobic004G156500--Sobic003G416700 Sobic004G156500--Sobic002G357100 Sobic004G156500--Sobic002G259800 Sobic001G542700 Sobic001G542700 Sobic001G138400--Sobic001G542700 Sobic003G353600 Sobic003G353600 Sobic001G138400--Sobic003G353600 Sobic002G423200 Sobic002G423200 Sobic001G138400--Sobic002G423200 Sobic001G138400--Sobic008G100100 Sobic003G293200 Sobic003G293200 Sobic001G138400--Sobic003G293200 Sobic007G031600 Sobic007G031600 Sobic001G138400--Sobic007G031600 Sobic001G138400--Sobic005G216300 Sobic009G151200 Sobic009G151200 Sobic001G138400--Sobic009G151200 Sobic007G061700 Sobic007G061700 Sobic001G138400--Sobic007G061700 Sobic006G252700--Sobic003G081000 Sobic001G466700 Sobic001G466700 Sobic006G252700--Sobic001G466700 Sobic004G350100 Sobic004G350100 Sobic006G252700--Sobic004G350100 Sobic006G252700--Sobic001G143500 Sobic007G118200 Sobic007G118200 Sobic006G252700--Sobic007G118200 Sobic006G278700 Sobic006G278700 Sobic006G252700--Sobic006G278700 Sobic006G252700--Sobic003G401100 Sobic003G439800 Sobic003G439800 Sobic006G252700--Sobic003G439800 Sobic002G034600 Sobic002G034600 Sobic006G252700--Sobic002G034600 Sobic003G359300 Sobic003G359300 Sobic002G058300--Sobic003G359300 Sobic007G086500 Sobic007G086500 Sobic002G058300--Sobic007G086500 Sobic002G186000 Sobic002G186000 Sobic002G058300--Sobic002G186000 Sobic001G010600 Sobic001G010600 Sobic002G058300--Sobic001G010600 Sobic003G197800 Sobic003G197800 Sobic002G058300--Sobic003G197800 Sobic009G198100 Sobic009G198100 Sobic002G058300--Sobic009G198100 Sobic010G033400 Sobic010G033400 Sobic002G058300--Sobic010G033400 Sobic002G058300--Sobic006G267300 Sobic007G205000 Sobic007G205000 Sobic002G058300--Sobic007G205000 Sobic001G253200 Sobic001G253200 Sobic007G054400--Sobic001G253200 Sobic004G039200 Sobic004G039200 Sobic007G054400--Sobic004G039200 Sobic003G101500 Sobic003G101500 Sobic007G054400--Sobic003G101500 Sobic004G145500 Sobic004G145500 Sobic007G054400--Sobic004G145500 Sobic007G054400--Sobic003G197800 Sobic004G258700 Sobic004G258700 Sobic007G054400--Sobic004G258700 Sobic001G433300 Sobic001G433300 Sobic007G054400--Sobic001G433300 Sobic009G065100 Sobic009G065100 Sobic007G054400--Sobic009G065100 Sobic006G052300 Sobic006G052300 Sobic007G054400--Sobic006G052300 Sobic009G195200 Sobic009G195200 Sobic002G259800--Sobic009G195200 Sobic002G259800--Sobic001G306900 Sobic005G015900 Sobic005G015900 Sobic002G259800--Sobic005G015900 Sobic003G394300 Sobic003G394300 Sobic002G259800--Sobic003G394300 Sobic006G248500 Sobic006G248500 Sobic002G259800--Sobic006G248500 Sobic001G246500 Sobic001G246500 Sobic002G259800--Sobic001G246500 Sobic005G084100 Sobic005G084100 Sobic002G259800--Sobic005G084100 Sobic002G259800--Sobic002G423200 Sobic002G259800--Sobic004G156500 Sobic002G357100--Sobic004G156500 Sobic006G067600 Sobic006G067600 Sobic002G357100--Sobic006G067600 Sobic002G357100--Sobic006G210000 Sobic009G129600 Sobic009G129600 Sobic002G357100--Sobic009G129600 Sobic007G183300 Sobic007G183300 Sobic002G357100--Sobic007G183300 Sobic007G091600 Sobic007G091600 Sobic002G357100--Sobic007G091600 Sobic002G357100--Sobic009G151200 Sobic002G357100--Sobic008G100100 Sobic004G129300 Sobic004G129300 Sobic002G357100--Sobic004G129300
Octagon: transcription factors


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