Gene annotation
Transcriptome id Sobic.002G309200.1
Synonym FRS7, Sb02g033910
Functional annotation FAR1 family protein, expressed
UniProt A0A1B6QEC1
Pfam PF03101 PF10551 PF04434
Panther DB PTHR31669:SF23 PTHR31669
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT4G38180 : FAR1-related sequence 5
RAP-DB (Rice) LOC_Os07g31400.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium PNT75049 , PNT75051 , PNT75050 , PNT75053 , PNT75052
Barley HORVU2Hr1G050770.19 , HORVU2Hr1G050770.18 , HORVU2Hr1G050770.17 , HORVU2Hr1G050770.16 , HORVU2Hr1G050770.15 , HORVU2Hr1G050770.14 , HORVU2Hr1G050770.13 , HORVU2Hr1G050770.12 , HORVU2Hr1G050770.11 , HORVU2Hr1G050770.10 , HORVU2Hr1G050770.40 , HORVU2Hr1G050770.41 , HORVU2Hr1G050770.42 , HORVU2Hr1G050770.43 , HORVU2Hr1G050770.31 , HORVU2Hr1G050770.30 , HORVU2Hr1G050770.33 , HORVU2Hr1G050770.32 , HORVU2Hr1G050770.35 , HORVU2Hr1G050770.34 , HORVU2Hr1G050770.37 , HORVU2Hr1G050770.36 , HORVU2Hr1G050770.38 , HORVU2Hr1G050770.39 , HORVU2Hr1G050770.26 , HORVU2Hr1G050770.27 , HORVU2Hr1G050770.24 , HORVU2Hr1G050770.25 , HORVU2Hr1G050770.22 , HORVU2Hr1G050770.23 , HORVU2Hr1G050770.20 , HORVU2Hr1G050770.21 , HORVU2Hr1G050770.28 , HORVU2Hr1G050770.29 , HORVU2Hr1G050770.7 , HORVU2Hr1G050770.6 , HORVU2Hr1G050770.5 , HORVU2Hr1G050770.4 , HORVU2Hr1G050770.3 , HORVU2Hr1G050770.2 , HORVU2Hr1G050770.1 , HORVU2Hr1G050770.9 , HORVU2Hr1G050770.8
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G155600 dnaJ domain containing protein, expressed -
2 Sobic.005G191900 transporter family protein, putative, expressed -
3 Sobic.008G011100 OsNucAP2 - Putative Nucleoporin Autopeptidase homologue, expressed -
4 Sobic.007G071200 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
5 Sobic.001G540800 DNA binding protein, putative, expressed -
6 Sobic.004G096500 KH domain-containing protein, putative, expressed K13210: far upstream element-binding protein
7 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
8 Sobic.003G133900 exonuclease, putative, expressed K18417: ERI1 exoribonuclease 2
9 Sobic.007G011600 KH domain-containing protein, putative, expressed K13210: far upstream element-binding protein
10 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -
11 Sobic.006G269800 TFIIH basal transcription factor complex p52 subunit, putative, expressed K03144: TFIIH4, GTF2H4, transcription initiation factor TFIIH subunit 4
12 Sobic.002G431400 - -
13 Sobic.008G017100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
14 Sobic.002G425500 ATPOT1, putative, expressed -
15 Sobic.001G081000 nucleotide-binding protein-like, putative, expressed K03593: mrp, ATP-binding protein involved in chromosome partitioning
16 Sobic.001G393900 FAD binding domain containing protein, expressed -
17 Sobic.009G093400 - -
18 Sobic.006G226300 SDA1, putative, expressed K14856: SDA1, protein SDA1
19 Sobic.009G251200 expressed protein -
20 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit


Gene co-expression network
sample Sobic002G309200 Sobic002G309200 Sobic004G155600 Sobic004G155600 Sobic002G309200--Sobic004G155600 Sobic005G191900 Sobic005G191900 Sobic002G309200--Sobic005G191900 Sobic008G011100 Sobic008G011100 Sobic002G309200--Sobic008G011100 Sobic007G071200 Sobic007G071200 Sobic002G309200--Sobic007G071200 Sobic001G540800 Sobic001G540800 Sobic002G309200--Sobic001G540800 Sobic004G096500 Sobic004G096500 Sobic002G309200--Sobic004G096500 Sobic002G145800 Sobic002G145800 Sobic002G309200--Sobic002G145800 Sobic003G133900 Sobic003G133900 Sobic002G309200--Sobic003G133900 Sobic007G011600 Sobic007G011600 Sobic002G309200--Sobic007G011600 Sobic006G014100 Sobic006G014100 Sobic004G155600--Sobic006G014100 Sobic006G270600 Sobic006G270600 Sobic004G155600--Sobic006G270600 Sobic006G080400 Sobic006G080400 Sobic004G155600--Sobic006G080400 Sobic004G355800 Sobic004G355800 Sobic004G155600--Sobic004G355800 Sobic002G425500 Sobic002G425500 Sobic004G155600--Sobic002G425500 Sobic006G118700 Sobic006G118700 Sobic004G155600--Sobic006G118700 Sobic006G210000 Sobic006G210000 Sobic004G155600--Sobic006G210000 Sobic004G155600--Sobic002G145800 Sobic001G002600 Sobic001G002600 Sobic004G155600--Sobic001G002600 Sobic001G311500 Sobic001G311500 Sobic005G191900--Sobic001G311500 Sobic001G363500 Sobic001G363500 Sobic005G191900--Sobic001G363500 Sobic010G094700 Sobic010G094700 Sobic005G191900--Sobic010G094700 Sobic009G247400 Sobic009G247400 Sobic005G191900--Sobic009G247400 Sobic010G112100 Sobic010G112100 Sobic005G191900--Sobic010G112100 Sobic007G157000 Sobic007G157000 Sobic005G191900--Sobic007G157000 Sobic005G191900--Sobic006G118700 Sobic008G028700 Sobic008G028700 Sobic005G191900--Sobic008G028700 Sobic008G002500 Sobic008G002500 Sobic005G191900--Sobic008G002500 Sobic001G219600 Sobic001G219600 Sobic008G011100--Sobic001G219600 Sobic004G039200 Sobic004G039200 Sobic008G011100--Sobic004G039200 Sobic004G087600 Sobic004G087600 Sobic008G011100--Sobic004G087600 Sobic002G031400 Sobic002G031400 Sobic008G011100--Sobic002G031400 Sobic009G260500 Sobic009G260500 Sobic008G011100--Sobic009G260500 Sobic004G018300 Sobic004G018300 Sobic008G011100--Sobic004G018300 Sobic001G167200 Sobic001G167200 Sobic008G011100--Sobic001G167200 Sobic009G065100 Sobic009G065100 Sobic008G011100--Sobic009G065100 Sobic008G011100--Sobic001G311500 Sobic008G173100 Sobic008G173100 Sobic007G071200--Sobic008G173100 Sobic009G050900 Sobic009G050900 Sobic007G071200--Sobic009G050900 Sobic001G493200 Sobic001G493200 Sobic007G071200--Sobic001G493200 Sobic007G071200--Sobic006G118700 Sobic007G071200--Sobic005G191900 Sobic009G177500 Sobic009G177500 Sobic007G071200--Sobic009G177500 Sobic002G083500 Sobic002G083500 Sobic007G071200--Sobic002G083500 Sobic007G071200--Sobic003G133900 Sobic003G401100 Sobic003G401100 Sobic007G071200--Sobic003G401100 Sobic006G036100 Sobic006G036100 Sobic001G540800--Sobic006G036100 Sobic001G540800--Sobic002G425500 Sobic001G540800--Sobic002G145800 Sobic010G145800 Sobic010G145800 Sobic001G540800--Sobic010G145800 Sobic004G019500 Sobic004G019500 Sobic001G540800--Sobic004G019500 Sobic001G227200 Sobic001G227200 Sobic001G540800--Sobic001G227200 Sobic006G269800 Sobic006G269800 Sobic001G540800--Sobic006G269800 Sobic001G020000 Sobic001G020000 Sobic001G540800--Sobic001G020000 Sobic001G540800--Sobic002G309200 Sobic004G096500--Sobic007G011600 Sobic001G303675 Sobic001G303675 Sobic004G096500--Sobic001G303675 Sobic006G222300 Sobic006G222300 Sobic004G096500--Sobic006G222300 Sobic006G052300 Sobic006G052300 Sobic004G096500--Sobic006G052300 Sobic004G096500--Sobic008G011100 Sobic002G259800 Sobic002G259800 Sobic004G096500--Sobic002G259800 Sobic001G306900 Sobic001G306900 Sobic004G096500--Sobic001G306900 Sobic005G079800 Sobic005G079800 Sobic004G096500--Sobic005G079800 Sobic001G261496 Sobic001G261496 Sobic004G096500--Sobic001G261496 Sobic002G145800--Sobic006G269800 Sobic003G416700 Sobic003G416700 Sobic002G145800--Sobic003G416700 Sobic007G183300 Sobic007G183300 Sobic002G145800--Sobic007G183300 Sobic001G087600 Sobic001G087600 Sobic002G145800--Sobic001G087600 Sobic001G051700 Sobic001G051700 Sobic002G145800--Sobic001G051700 Sobic003G062300 Sobic003G062300 Sobic002G145800--Sobic003G062300 Sobic008G147200 Sobic008G147200 Sobic002G145800--Sobic008G147200 Sobic001G023000 Sobic001G023000 Sobic002G145800--Sobic001G023000 Sobic010G186600 Sobic010G186600 Sobic002G145800--Sobic010G186600 Sobic004G309900 Sobic004G309900 Sobic003G133900--Sobic004G309900 Sobic003G133900--Sobic001G493200 Sobic003G133900--Sobic002G083500 Sobic001G398800 Sobic001G398800 Sobic003G133900--Sobic001G398800 Sobic007G183900 Sobic007G183900 Sobic003G133900--Sobic007G183900 Sobic005G172500 Sobic005G172500 Sobic003G133900--Sobic005G172500 Sobic003G133900--Sobic006G210000 Sobic004G200200 Sobic004G200200 Sobic003G133900--Sobic004G200200 Sobic003G133900--Sobic007G071200 Sobic007G011600--Sobic004G096500 Sobic007G011600--Sobic010G145800 Sobic007G011600--Sobic002G145800 Sobic007G011600--Sobic006G222300 Sobic010G279700 Sobic010G279700 Sobic007G011600--Sobic010G279700 Sobic005G220000 Sobic005G220000 Sobic007G011600--Sobic005G220000 Sobic007G091600 Sobic007G091600 Sobic007G011600--Sobic007G091600 Sobic007G011600--Sobic005G079800 Sobic007G011600--Sobic008G011100
Octagon: transcription factors


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