Gene annotation
Transcriptome id Sobic.003G016500.1
Synonym ATX4, SDG16, Sb03g001640
Functional annotation histone-lysine N-methyltransferase ATX5, putative, expressed
UniProt A0A1B6Q0U0
Pfam PF13831 PF00855 PF00856 PF13832
Panther DB PTHR13793 PTHR13793:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G27910 : SET domain protein 16
RAP-DB (Rice) LOC_Os01g11952.1 : histone-lysine N-methyltransferase ATX5, putative, expressed
MaizeGDB (Corn) Zm00025a035927 , Zm00025a022891
Brachypodium KQK03316
Barley HORVU3Hr1G027580.6 , HORVU3Hr1G027580.7 , HORVU3Hr1G027580.5 , HORVU3Hr1G027580.4 , HORVU3Hr1G027580.3 , HORVU3Hr1G027580.2 , HORVU3Hr1G027580.1 , HORVU3Hr1G027580.9 , HORVU3Hr1G027580.8 , HORVU3Hr1G027580.20 , HORVU3Hr1G027580.19 , HORVU3Hr1G027580.18 , HORVU3Hr1G027580.17 , HORVU3Hr1G027580.16 , HORVU3Hr1G027580.15 , HORVU3Hr1G027580.12 , HORVU3Hr1G027580.10
Wheat TraesCS3D02G144300 , TraesCS3D02G144300 , TraesCS3D02G144300 , TraesCS3D02G144300 , TraesCS3D02G144300 , TraesCS3D02G144300 , TraesCS3B02G161800 , TraesCS3B02G161800 , TraesCS3B02G161800 , TraesCS3B02G161800 , TraesCS3B02G161800 , TraesCS3A02G143300 , TraesCS3A02G143300 , TraesCS3A02G143300 , TraesCS3A02G143300 , TraesCS3A02G143300 , TraesCS3A02G143300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G070600 DNA binding protein, putative, expressed -
2 Sobic.003G299500 expressed protein -
3 Sobic.008G092800 expressed protein -
4 Sobic.008G080500 expressed protein -
5 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
6 Sobic.007G034200 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
7 Sobic.003G124600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
8 Sobic.004G106250 - -
9 Sobic.008G140700 RNA recognition motif containing protein, putative, expressed -
10 Sobic.004G141800 expressed protein -
11 Sobic.001G156900 single myb histone, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.003G334700 HEAT, putative, expressed K16803: CKAP5, cytoskeleton-associated protein 5
13 Sobic.003G113300 expressed protein -
14 Sobic.002G263700 bromodomain protein 103, putative, expressed -
15 Sobic.006G170900 growth regulator related protein, putative, expressed -
16 Sobic.006G029100 actin, putative, expressed K11673: ACTR8, ARP8, actin-related protein 8
17 Sobic.003G135500 sugar transporter superfamily, putative, expressed -
18 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
19 Sobic.007G159200 PWWP domain containing protein, expressed -
20 Sobic.002G063900 zinc ion binding protein, putative, expressed -


Gene co-expression network
sample Sobic003G016500 Sobic003G016500 Sobic010G070600 Sobic010G070600 Sobic003G016500--Sobic010G070600 Sobic003G299500 Sobic003G299500 Sobic003G016500--Sobic003G299500 Sobic008G092800 Sobic008G092800 Sobic003G016500--Sobic008G092800 Sobic008G080500 Sobic008G080500 Sobic003G016500--Sobic008G080500 Sobic002G119600 Sobic002G119600 Sobic003G016500--Sobic002G119600 Sobic007G034200 Sobic007G034200 Sobic003G016500--Sobic007G034200 Sobic003G124600 Sobic003G124600 Sobic003G016500--Sobic003G124600 Sobic004G106250 Sobic004G106250 Sobic003G016500--Sobic004G106250 Sobic008G140700 Sobic008G140700 Sobic003G016500--Sobic008G140700 Sobic010G070600--Sobic003G016500 Sobic010G070600--Sobic002G119600 Sobic010G139500 Sobic010G139500 Sobic010G070600--Sobic010G139500 Sobic001G087600 Sobic001G087600 Sobic010G070600--Sobic001G087600 Sobic010G070600--Sobic008G140700 Sobic006G029100 Sobic006G029100 Sobic010G070600--Sobic006G029100 Sobic010G034100 Sobic010G034100 Sobic010G070600--Sobic010G034100 Sobic003G241700 Sobic003G241700 Sobic010G070600--Sobic003G241700 Sobic003G405500 Sobic003G405500 Sobic010G070600--Sobic003G405500 Sobic003G299500--Sobic007G034200 Sobic003G194800 Sobic003G194800 Sobic003G299500--Sobic003G194800 Sobic003G299500--Sobic004G106250 Sobic009G120400 Sobic009G120400 Sobic003G299500--Sobic009G120400 Sobic003G299500--Sobic003G016500 Sobic001G123600 Sobic001G123600 Sobic003G299500--Sobic001G123600 Sobic006G245900 Sobic006G245900 Sobic003G299500--Sobic006G245900 Sobic002G235900 Sobic002G235900 Sobic003G299500--Sobic002G235900 Sobic006G191200 Sobic006G191200 Sobic003G299500--Sobic006G191200 Sobic003G143800 Sobic003G143800 Sobic008G092800--Sobic003G143800 Sobic007G145400 Sobic007G145400 Sobic008G092800--Sobic007G145400 Sobic008G092800--Sobic003G016500 Sobic001G248100 Sobic001G248100 Sobic008G092800--Sobic001G248100 Sobic010G262100 Sobic010G262100 Sobic008G092800--Sobic010G262100 Sobic001G437400 Sobic001G437400 Sobic008G092800--Sobic001G437400 Sobic007G047600 Sobic007G047600 Sobic008G092800--Sobic007G047600 Sobic006G181800 Sobic006G181800 Sobic008G092800--Sobic006G181800 Sobic002G371600 Sobic002G371600 Sobic008G092800--Sobic002G371600 Sobic007G159200 Sobic007G159200 Sobic008G080500--Sobic007G159200 Sobic008G080500--Sobic010G262100 Sobic004G355800 Sobic004G355800 Sobic008G080500--Sobic004G355800 Sobic006G112700 Sobic006G112700 Sobic008G080500--Sobic006G112700 Sobic002G079100 Sobic002G079100 Sobic008G080500--Sobic002G079100 Sobic005G200900 Sobic005G200900 Sobic008G080500--Sobic005G200900 Sobic010G269300 Sobic010G269300 Sobic008G080500--Sobic010G269300 Sobic008G080500--Sobic003G299500 Sobic008G080500--Sobic002G235900 Sobic001G156900 Sobic001G156900 Sobic002G119600--Sobic001G156900 Sobic002G119600--Sobic010G139500 Sobic002G119600--Sobic007G145400 Sobic004G204100 Sobic004G204100 Sobic002G119600--Sobic004G204100 Sobic010G000800 Sobic010G000800 Sobic002G119600--Sobic010G000800 Sobic002G412700 Sobic002G412700 Sobic002G119600--Sobic002G412700 Sobic005G110499 Sobic005G110499 Sobic002G119600--Sobic005G110499 Sobic002G119600--Sobic001G248100 Sobic003G334700 Sobic003G334700 Sobic002G119600--Sobic003G334700 Sobic007G034200--Sobic003G299500 Sobic007G034200--Sobic009G120400 Sobic001G051400 Sobic001G051400 Sobic007G034200--Sobic001G051400 Sobic007G034200--Sobic001G123600 Sobic007G034200--Sobic003G194800 Sobic002G386900 Sobic002G386900 Sobic007G034200--Sobic002G386900 Sobic007G034200--Sobic006G191200 Sobic003G113300 Sobic003G113300 Sobic007G034200--Sobic003G113300 Sobic006G170900 Sobic006G170900 Sobic007G034200--Sobic006G170900 Sobic003G124600--Sobic002G079100 Sobic003G124600--Sobic006G170900 Sobic002G292800 Sobic002G292800 Sobic003G124600--Sobic002G292800 Sobic003G124600--Sobic003G016500 Sobic003G124600--Sobic003G299500 Sobic003G124600--Sobic007G034200 Sobic009G102000 Sobic009G102000 Sobic003G124600--Sobic009G102000 Sobic003G124600--Sobic003G113300 Sobic001G424600 Sobic001G424600 Sobic003G124600--Sobic001G424600 Sobic004G106250--Sobic003G299500 Sobic004G106250--Sobic003G016500 Sobic004G106250--Sobic006G245900 Sobic004G106250--Sobic002G292800 Sobic004G106250--Sobic006G170900 Sobic004G106250--Sobic002G235900 Sobic004G106250--Sobic006G191200 Sobic004G106250--Sobic009G102000 Sobic004G106250--Sobic007G034200 Sobic001G020000 Sobic001G020000 Sobic008G140700--Sobic001G020000 Sobic008G140700--Sobic001G087600 Sobic008G140700--Sobic010G034100 Sobic008G140700--Sobic003G405500 Sobic003G312700 Sobic003G312700 Sobic008G140700--Sobic003G312700 Sobic003G152400 Sobic003G152400 Sobic008G140700--Sobic003G152400 Sobic006G234700 Sobic006G234700 Sobic008G140700--Sobic006G234700 Sobic002G227500 Sobic002G227500 Sobic008G140700--Sobic002G227500 Sobic010G059500 Sobic010G059500 Sobic008G140700--Sobic010G059500
Octagon: transcription factors


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