Gene annotation
Transcriptome id Sobic.003G334700.1,Sobic.003G334700.2
Synonym GEM1, Sb03g037950, MOR1
Functional annotation HEAT, putative, expressed
UniProt A0A1B6Q6R7 , A0A1B6Q6Q7
Pfam PF12348 PF13646 PF13646 PF12348
Panther DB PTHR12609:SF0 PTHR12609 PTHR12609 PTHR12609:SF0
NCBI CDD KOG1820; Microtubule-associated protein
KEGG Orthology K16803; CKAP5, cytoskeleton-associated protein 5
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35630 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os01g60050.1 : HEAT, putative, expressed
MaizeGDB (Corn) Zm00025a039789 , Zm00025a027094
Brachypodium KQK10308 , KQK10309
Barley HORVU3Hr1G080210.34 , HORVU3Hr1G080210.35 , HORVU3Hr1G080210.36 , HORVU3Hr1G080210.37 , HORVU3Hr1G080210.30 , HORVU3Hr1G080210.32 , HORVU3Hr1G080210.33 , HORVU3Hr1G080210.38 , HORVU3Hr1G080210.39 , HORVU3Hr1G080210.49 , HORVU3Hr1G080210.48 , HORVU3Hr1G080210.45 , HORVU3Hr1G080210.44 , HORVU3Hr1G080210.47 , HORVU3Hr1G080210.46 , HORVU3Hr1G080210.41 , HORVU3Hr1G080210.40 , HORVU3Hr1G080210.43 , HORVU3Hr1G080210.42 , HORVU3Hr1G080210.52 , HORVU3Hr1G080210.53 , HORVU3Hr1G080210.50 , HORVU3Hr1G080210.51 , HORVU3Hr1G080210.56 , HORVU3Hr1G080210.57 , HORVU3Hr1G080210.54 , HORVU3Hr1G080210.55 , HORVU3Hr1G080210.58 , HORVU3Hr1G080210.59 , HORVU3Hr1G080210.31 , HORVU3Hr1G080210.19 , HORVU3Hr1G080210.16 , HORVU3Hr1G080210.17 , HORVU3Hr1G080210.14 , HORVU3Hr1G080210.13 , HORVU3Hr1G080210.10 , HORVU3Hr1G080210.11 , HORVU3Hr1G080210.18 , HORVU3Hr1G080210.63 , HORVU3Hr1G080210.62 , HORVU3Hr1G080210.61 , HORVU3Hr1G080210.60 , HORVU3Hr1G080210.65 , HORVU3Hr1G080210.64 , HORVU3Hr1G080210.15 , HORVU3Hr1G080210.12 , HORVU3Hr1G080210.27 , HORVU3Hr1G080210.26 , HORVU3Hr1G080210.25 , HORVU3Hr1G080210.24 , HORVU3Hr1G080210.23 , HORVU3Hr1G080210.22 , HORVU3Hr1G080210.21 , HORVU3Hr1G080210.20 , HORVU3Hr1G080210.29 , HORVU3Hr1G080210.28 , HORVU3Hr1G080210.8 , HORVU3Hr1G080210.9 , HORVU3Hr1G080210.4 , HORVU3Hr1G080210.5 , HORVU3Hr1G080210.6 , HORVU3Hr1G080210.7 , HORVU3Hr1G080210.2 , HORVU3Hr1G080210.3
Wheat TraesCS3D02G333400 , TraesCS3D02G333400 , TraesCS3D02G333400 , TraesCS3D02G333400 , TraesCS3B02G371500 , TraesCS3B02G371500 , TraesCS3B02G371500 , TraesCS3A02G339900 , TraesCS3A02G339900
Populus -


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cDNA sequences
Sobic.003G334700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G139500 phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
2 Sobic.001G437400 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
3 Sobic.003G314700 expressed protein -
4 Sobic.001G118000 phosphatidylinositol 4-kinase PI4K, putative, expressed K00888: phosphatidylinositol 4-kinase A
5 Sobic.005G059500 expressed protein -
6 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
7 Sobic.003G293000 expressed protein -
8 Sobic.004G336300 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
9 Sobic.010G000800 PHD-finger domain containing protein, expressed -
10 Sobic.009G118900 expressed protein -
11 Sobic.004G204100 expressed protein -
12 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
13 Sobic.004G034300 transducin family protein, putative, expressed -
14 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
15 Sobic.002G340900 ATMIN7, putative, expressed K13462: guanine nucleotide-exchange factor
16 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
17 Sobic.003G016500 histone-lysine N-methyltransferase ATX5, putative, expressed -
18 Sobic.003G250900 AAA-type ATPase family protein, putative, expressed -
19 Sobic.005G114500 growth regulator related protein, putative, expressed -
20 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase


Gene co-expression network
sample Sobic003G334700 Sobic003G334700 Sobic010G139500 Sobic010G139500 Sobic003G334700--Sobic010G139500 Sobic001G437400 Sobic001G437400 Sobic003G334700--Sobic001G437400 Sobic003G314700 Sobic003G314700 Sobic003G334700--Sobic003G314700 Sobic001G118000 Sobic001G118000 Sobic003G334700--Sobic001G118000 Sobic005G059500 Sobic005G059500 Sobic003G334700--Sobic005G059500 Sobic002G119600 Sobic002G119600 Sobic003G334700--Sobic002G119600 Sobic003G293000 Sobic003G293000 Sobic003G334700--Sobic003G293000 Sobic004G336300 Sobic004G336300 Sobic003G334700--Sobic004G336300 Sobic010G000800 Sobic010G000800 Sobic003G334700--Sobic010G000800 Sobic004G204100 Sobic004G204100 Sobic010G139500--Sobic004G204100 Sobic010G139500--Sobic003G334700 Sobic010G139500--Sobic002G119600 Sobic010G139500--Sobic003G314700 Sobic003G405500 Sobic003G405500 Sobic010G139500--Sobic003G405500 Sobic008G124800 Sobic008G124800 Sobic010G139500--Sobic008G124800 Sobic002G412700 Sobic002G412700 Sobic010G139500--Sobic002G412700 Sobic007G145400 Sobic007G145400 Sobic010G139500--Sobic007G145400 Sobic010G070600 Sobic010G070600 Sobic010G139500--Sobic010G070600 Sobic002G340900 Sobic002G340900 Sobic001G437400--Sobic002G340900 Sobic001G437400--Sobic003G314700 Sobic003G250900 Sobic003G250900 Sobic001G437400--Sobic003G250900 Sobic009G118900 Sobic009G118900 Sobic001G437400--Sobic009G118900 Sobic003G029600 Sobic003G029600 Sobic001G437400--Sobic003G029600 Sobic001G117800 Sobic001G117800 Sobic001G437400--Sobic001G117800 Sobic001G437400--Sobic003G334700 Sobic001G437400--Sobic008G124800 Sobic007G019300 Sobic007G019300 Sobic001G437400--Sobic007G019300 Sobic003G314700--Sobic003G029600 Sobic003G314700--Sobic008G124800 Sobic003G314700--Sobic001G437400 Sobic003G240700 Sobic003G240700 Sobic003G314700--Sobic003G240700 Sobic003G314700--Sobic003G405500 Sobic003G314700--Sobic007G019300 Sobic003G314700--Sobic004G204100 Sobic001G426600 Sobic001G426600 Sobic003G314700--Sobic001G426600 Sobic003G314700--Sobic002G412700 Sobic001G118000--Sobic005G059500 Sobic009G122500 Sobic009G122500 Sobic001G118000--Sobic009G122500 Sobic010G223400 Sobic010G223400 Sobic001G118000--Sobic010G223400 Sobic001G118000--Sobic003G334700 Sobic007G172700 Sobic007G172700 Sobic001G118000--Sobic007G172700 Sobic001G308400 Sobic001G308400 Sobic001G118000--Sobic001G308400 Sobic004G060300 Sobic004G060300 Sobic001G118000--Sobic004G060300 Sobic009G040325 Sobic009G040325 Sobic001G118000--Sobic009G040325 Sobic001G156900 Sobic001G156900 Sobic001G118000--Sobic001G156900 Sobic006G021700 Sobic006G021700 Sobic005G059500--Sobic006G021700 Sobic005G059500--Sobic001G118000 Sobic005G059500--Sobic010G223400 Sobic001G012900 Sobic001G012900 Sobic005G059500--Sobic001G012900 Sobic003G346400 Sobic003G346400 Sobic005G059500--Sobic003G346400 Sobic005G114500 Sobic005G114500 Sobic005G059500--Sobic005G114500 Sobic001G474400 Sobic001G474400 Sobic005G059500--Sobic001G474400 Sobic005G059500--Sobic009G122500 Sobic002G070600 Sobic002G070600 Sobic005G059500--Sobic002G070600 Sobic002G119600--Sobic001G156900 Sobic002G119600--Sobic010G139500 Sobic002G119600--Sobic007G145400 Sobic002G119600--Sobic004G204100 Sobic002G119600--Sobic010G000800 Sobic002G119600--Sobic002G412700 Sobic005G110499 Sobic005G110499 Sobic002G119600--Sobic005G110499 Sobic001G248100 Sobic001G248100 Sobic002G119600--Sobic001G248100 Sobic002G119600--Sobic003G334700 Sobic003G293000--Sobic003G240700 Sobic003G293000--Sobic001G012900 Sobic009G049400 Sobic009G049400 Sobic003G293000--Sobic009G049400 Sobic001G335900 Sobic001G335900 Sobic003G293000--Sobic001G335900 Sobic003G005900 Sobic003G005900 Sobic003G293000--Sobic003G005900 Sobic003G293000--Sobic003G334700 Sobic003G293000--Sobic005G059500 Sobic003G293000--Sobic001G474400 Sobic003G293000--Sobic003G314700 Sobic008G072200 Sobic008G072200 Sobic004G336300--Sobic008G072200 Sobic004G034300 Sobic004G034300 Sobic004G336300--Sobic004G034300 Sobic004G336300--Sobic002G070600 Sobic004G336300--Sobic009G118900 Sobic004G336300--Sobic001G117800 Sobic004G336300--Sobic003G334700 Sobic004G174700 Sobic004G174700 Sobic004G336300--Sobic004G174700 Sobic010G178600 Sobic010G178600 Sobic004G336300--Sobic010G178600 Sobic004G336300--Sobic001G437400 Sobic004G265500 Sobic004G265500 Sobic010G000800--Sobic004G265500 Sobic004G322400 Sobic004G322400 Sobic010G000800--Sobic004G322400 Sobic003G163200 Sobic003G163200 Sobic010G000800--Sobic003G163200 Sobic003G379200 Sobic003G379200 Sobic010G000800--Sobic003G379200 Sobic003G189600 Sobic003G189600 Sobic010G000800--Sobic003G189600 Sobic002G179400 Sobic002G179400 Sobic010G000800--Sobic002G179400 Sobic006G077200 Sobic006G077200 Sobic010G000800--Sobic006G077200 Sobic006G261400 Sobic006G261400 Sobic010G000800--Sobic006G261400 Sobic002G429300 Sobic002G429300 Sobic010G000800--Sobic002G429300
Octagon: transcription factors


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