Gene annotation
Transcriptome id Sobic.010G139500.1,Sobic.010G139500.2
Synonym Sb10g014640
Functional annotation phospholipid-transporting ATPase, putative, expressed
UniProt A0A1W0VT00 , C5Z2E3
Pfam PF00122 PF12710 PF16209 PF16212 PF12710 PF16212
Panther DB PTHR24092 PTHR24092:SF41
NCBI CDD -
KEGG Orthology K01530; phospholipid-translocating ATPase
Gene Ontology GO:0016021; integral component of membrane GO:0015914phospholipid transport GO:0005524ATP binding GO:0000287magnesium ion binding GO:0000166nucleotide binding GO:0016021integral component of membrane GO:0015914phospholipid transport GO:0005524ATP binding GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT1G68710 : ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
RAP-DB (Rice) LOC_Os06g29380.1 : phospholipid-transporting ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a042836 , Zm00025a050704 , Zm00025a041028
Brachypodium KQK18404 , KQK18405 , KQK18403 , PNT75954
Barley HORVU7Hr1G047470.11 , HORVU7Hr1G047470.10 , HORVU7Hr1G047470.12 , HORVU7Hr1G047470.7 , HORVU7Hr1G047470.1 , HORVU7Hr1G047470.2 , HORVU7Hr1G047470.9 , HORVU7Hr1G047470.8 , HORVU7Hr1G047470.5 , HORVU7Hr1G047470.6 , HORVU7Hr1G047470.3
Wheat TraesCS7A02G231600 , TraesCS7A02G231600 , TraesCS7A02G231600 , TraesCS7A02G231600 , TraesCS7B02G130000 , TraesCS7B02G130000 , TraesCS7D02G231800 , TraesCS7D02G231800 , TraesCS7D02G231800 , TraesCS7D02G231800 , TraesCS7A02G231600 , TraesCS7B02G130000 , TraesCS7D02G231800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G204100 expressed protein -
2 Sobic.003G334700 HEAT, putative, expressed K16803: CKAP5, cytoskeleton-associated protein 5
3 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
4 Sobic.003G314700 expressed protein -
5 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
6 Sobic.008G124800 expressed protein -
7 Sobic.002G412700 histone-arginine methyltransferase CARM1, putative, expressed K05931: CARM1, type I protein arginine methyltransferase
8 Sobic.007G145400 expressed protein -
9 Sobic.010G070600 DNA binding protein, putative, expressed -
10 Sobic.010G223100 PAP/25A associated domain containing protein, putative, expressed -
11 Sobic.010G000800 PHD-finger domain containing protein, expressed -
12 Sobic.004G336300 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
13 Sobic.010G099800 growth regulator related protein, putative, expressed -
14 Sobic.001G093800 WD domain containing protein, putative, expressed -
15 Sobic.008G091300 PolI-like DNA polymerase, putative, expressed K02349: DNA polymerase theta
16 Sobic.009G118900 expressed protein -
17 Sobic.003G189600 M16 domain containing zinc peptidase, putative, expressed -
18 Sobic.001G437400 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
19 Sobic.003G029600 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
20 Sobic.010G138900 cytidine and deoxycytidylate deaminase zinc-binding region family protein, expressed K11991: tRNA(adenine34) deaminase


Gene co-expression network
sample Sobic010G139500 Sobic010G139500 Sobic004G204100 Sobic004G204100 Sobic010G139500--Sobic004G204100 Sobic003G334700 Sobic003G334700 Sobic010G139500--Sobic003G334700 Sobic002G119600 Sobic002G119600 Sobic010G139500--Sobic002G119600 Sobic003G314700 Sobic003G314700 Sobic010G139500--Sobic003G314700 Sobic003G405500 Sobic003G405500 Sobic010G139500--Sobic003G405500 Sobic008G124800 Sobic008G124800 Sobic010G139500--Sobic008G124800 Sobic002G412700 Sobic002G412700 Sobic010G139500--Sobic002G412700 Sobic007G145400 Sobic007G145400 Sobic010G139500--Sobic007G145400 Sobic010G070600 Sobic010G070600 Sobic010G139500--Sobic010G070600 Sobic010G223100 Sobic010G223100 Sobic004G204100--Sobic010G223100 Sobic004G204100--Sobic010G139500 Sobic001G287500 Sobic001G287500 Sobic004G204100--Sobic001G287500 Sobic003G233400 Sobic003G233400 Sobic004G204100--Sobic003G233400 Sobic004G023100 Sobic004G023100 Sobic004G204100--Sobic004G023100 Sobic004G204100--Sobic003G314700 Sobic002G179400 Sobic002G179400 Sobic004G204100--Sobic002G179400 Sobic004G040500 Sobic004G040500 Sobic004G204100--Sobic004G040500 Sobic003G163200 Sobic003G163200 Sobic004G204100--Sobic003G163200 Sobic003G334700--Sobic010G139500 Sobic001G437400 Sobic001G437400 Sobic003G334700--Sobic001G437400 Sobic003G334700--Sobic003G314700 Sobic001G118000 Sobic001G118000 Sobic003G334700--Sobic001G118000 Sobic005G059500 Sobic005G059500 Sobic003G334700--Sobic005G059500 Sobic003G334700--Sobic002G119600 Sobic003G293000 Sobic003G293000 Sobic003G334700--Sobic003G293000 Sobic004G336300 Sobic004G336300 Sobic003G334700--Sobic004G336300 Sobic010G000800 Sobic010G000800 Sobic003G334700--Sobic010G000800 Sobic001G156900 Sobic001G156900 Sobic002G119600--Sobic001G156900 Sobic002G119600--Sobic010G139500 Sobic002G119600--Sobic007G145400 Sobic002G119600--Sobic004G204100 Sobic002G119600--Sobic010G000800 Sobic002G119600--Sobic002G412700 Sobic005G110499 Sobic005G110499 Sobic002G119600--Sobic005G110499 Sobic001G248100 Sobic001G248100 Sobic002G119600--Sobic001G248100 Sobic002G119600--Sobic003G334700 Sobic003G029600 Sobic003G029600 Sobic003G314700--Sobic003G029600 Sobic003G314700--Sobic008G124800 Sobic003G314700--Sobic001G437400 Sobic003G240700 Sobic003G240700 Sobic003G314700--Sobic003G240700 Sobic003G314700--Sobic003G405500 Sobic007G019300 Sobic007G019300 Sobic003G314700--Sobic007G019300 Sobic003G314700--Sobic004G204100 Sobic001G426600 Sobic001G426600 Sobic003G314700--Sobic001G426600 Sobic003G314700--Sobic002G412700 Sobic001G145400 Sobic001G145400 Sobic003G405500--Sobic001G145400 Sobic003G405500--Sobic008G124800 Sobic002G430300 Sobic002G430300 Sobic003G405500--Sobic002G430300 Sobic009G084900 Sobic009G084900 Sobic003G405500--Sobic009G084900 Sobic006G166200 Sobic006G166200 Sobic003G405500--Sobic006G166200 Sobic004G141800 Sobic004G141800 Sobic003G405500--Sobic004G141800 Sobic006G077200 Sobic006G077200 Sobic003G405500--Sobic006G077200 Sobic010G059500 Sobic010G059500 Sobic003G405500--Sobic010G059500 Sobic003G405500--Sobic003G314700 Sobic002G340900 Sobic002G340900 Sobic008G124800--Sobic002G340900 Sobic006G021700 Sobic006G021700 Sobic008G124800--Sobic006G021700 Sobic008G124800--Sobic007G019300 Sobic004G322400 Sobic004G322400 Sobic008G124800--Sobic004G322400 Sobic001G404600 Sobic001G404600 Sobic008G124800--Sobic001G404600 Sobic008G124800--Sobic003G233400 Sobic002G308500 Sobic002G308500 Sobic008G124800--Sobic002G308500 Sobic008G124800--Sobic003G405500 Sobic002G401500 Sobic002G401500 Sobic008G124800--Sobic002G401500 Sobic002G412700--Sobic001G248100 Sobic002G412700--Sobic003G405500 Sobic002G412700--Sobic003G314700 Sobic004G034700 Sobic004G034700 Sobic002G412700--Sobic004G034700 Sobic003G209400 Sobic003G209400 Sobic002G412700--Sobic003G209400 Sobic007G047600 Sobic007G047600 Sobic002G412700--Sobic007G047600 Sobic010G085200 Sobic010G085200 Sobic002G412700--Sobic010G085200 Sobic002G412700--Sobic002G119600 Sobic002G412700--Sobic010G139500 Sobic001G474400 Sobic001G474400 Sobic007G145400--Sobic001G474400 Sobic009G003700 Sobic009G003700 Sobic007G145400--Sobic009G003700 Sobic007G145400--Sobic001G248100 Sobic007G145400--Sobic002G119600 Sobic006G261400 Sobic006G261400 Sobic007G145400--Sobic006G261400 Sobic007G145400--Sobic003G314700 Sobic001G467100 Sobic001G467100 Sobic007G145400--Sobic001G467100 Sobic008G092800 Sobic008G092800 Sobic007G145400--Sobic008G092800 Sobic006G245900 Sobic006G245900 Sobic007G145400--Sobic006G245900 Sobic003G016500 Sobic003G016500 Sobic010G070600--Sobic003G016500 Sobic010G070600--Sobic002G119600 Sobic010G070600--Sobic010G139500 Sobic001G087600 Sobic001G087600 Sobic010G070600--Sobic001G087600 Sobic008G140700 Sobic008G140700 Sobic010G070600--Sobic008G140700 Sobic006G029100 Sobic006G029100 Sobic010G070600--Sobic006G029100 Sobic010G034100 Sobic010G034100 Sobic010G070600--Sobic010G034100 Sobic003G241700 Sobic003G241700 Sobic010G070600--Sobic003G241700 Sobic010G070600--Sobic003G405500
Octagon: transcription factors


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