Gene annotation
Transcriptome id Sobic.010G070600.1
Synonym DUO3, Sb10g006170
Functional annotation DNA binding protein, putative, expressed
UniProt A0A194YHU1
Pfam -
Panther DB PTHR16088
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64570 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os03g46950.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a046639
Brachypodium PNT76285 , KQJ88273 , PNT76284 , PNT76287 , PNT76286
Barley HORVU7Hr1G031870.1 , HORVU7Hr1G031870.3 , HORVU7Hr1G031870.4 , HORVU7Hr1G031870.7 , HORVU7Hr1G031870.8
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G016500 histone-lysine N-methyltransferase ATX5, putative, expressed -
2 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
3 Sobic.010G139500 phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
4 Sobic.001G087600 ZOS9-03 - C2H2 zinc finger protein, expressed -
5 Sobic.008G140700 RNA recognition motif containing protein, putative, expressed -
6 Sobic.006G029100 actin, putative, expressed K11673: ACTR8, ARP8, actin-related protein 8
7 Sobic.010G034100 GTP-binding protein GUF1, putative, expressed -
8 Sobic.003G241700 SET domain containing protein, expressed -
9 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
10 Sobic.004G106400 protein kinase domain containing protein, expressed -
11 Sobic.003G334700 HEAT, putative, expressed K16803: CKAP5, cytoskeleton-associated protein 5
12 Sobic.004G106250 - -
13 Sobic.010G185400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
14 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
15 Sobic.001G155400 initiation factor 2 subunit family domain containing protein, expressed K03680: translation initiation factor eIF-2B subunit delta
16 Sobic.002G412700 histone-arginine methyltransferase CARM1, putative, expressed K05931: CARM1, type I protein arginine methyltransferase
17 Sobic.010G000800 PHD-finger domain containing protein, expressed -
18 Sobic.001G035200 ThiF family domain containing protein, putative, expressed K04532: NAE1, amyloid beta precursor protein binding protein 1
19 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
20 Sobic.003G113300 expressed protein -


Gene co-expression network
sample Sobic010G070600 Sobic010G070600 Sobic003G016500 Sobic003G016500 Sobic010G070600--Sobic003G016500 Sobic002G119600 Sobic002G119600 Sobic010G070600--Sobic002G119600 Sobic010G139500 Sobic010G139500 Sobic010G070600--Sobic010G139500 Sobic001G087600 Sobic001G087600 Sobic010G070600--Sobic001G087600 Sobic008G140700 Sobic008G140700 Sobic010G070600--Sobic008G140700 Sobic006G029100 Sobic006G029100 Sobic010G070600--Sobic006G029100 Sobic010G034100 Sobic010G034100 Sobic010G070600--Sobic010G034100 Sobic003G241700 Sobic003G241700 Sobic010G070600--Sobic003G241700 Sobic003G405500 Sobic003G405500 Sobic010G070600--Sobic003G405500 Sobic003G016500--Sobic010G070600 Sobic003G299500 Sobic003G299500 Sobic003G016500--Sobic003G299500 Sobic008G092800 Sobic008G092800 Sobic003G016500--Sobic008G092800 Sobic008G080500 Sobic008G080500 Sobic003G016500--Sobic008G080500 Sobic003G016500--Sobic002G119600 Sobic007G034200 Sobic007G034200 Sobic003G016500--Sobic007G034200 Sobic003G124600 Sobic003G124600 Sobic003G016500--Sobic003G124600 Sobic004G106250 Sobic004G106250 Sobic003G016500--Sobic004G106250 Sobic003G016500--Sobic008G140700 Sobic001G156900 Sobic001G156900 Sobic002G119600--Sobic001G156900 Sobic002G119600--Sobic010G139500 Sobic007G145400 Sobic007G145400 Sobic002G119600--Sobic007G145400 Sobic004G204100 Sobic004G204100 Sobic002G119600--Sobic004G204100 Sobic010G000800 Sobic010G000800 Sobic002G119600--Sobic010G000800 Sobic002G412700 Sobic002G412700 Sobic002G119600--Sobic002G412700 Sobic005G110499 Sobic005G110499 Sobic002G119600--Sobic005G110499 Sobic001G248100 Sobic001G248100 Sobic002G119600--Sobic001G248100 Sobic003G334700 Sobic003G334700 Sobic002G119600--Sobic003G334700 Sobic010G139500--Sobic004G204100 Sobic010G139500--Sobic003G334700 Sobic010G139500--Sobic002G119600 Sobic003G314700 Sobic003G314700 Sobic010G139500--Sobic003G314700 Sobic010G139500--Sobic003G405500 Sobic008G124800 Sobic008G124800 Sobic010G139500--Sobic008G124800 Sobic010G139500--Sobic002G412700 Sobic010G139500--Sobic007G145400 Sobic010G139500--Sobic010G070600 Sobic001G151100 Sobic001G151100 Sobic001G087600--Sobic001G151100 Sobic001G461400 Sobic001G461400 Sobic001G087600--Sobic001G461400 Sobic001G020000 Sobic001G020000 Sobic001G087600--Sobic001G020000 Sobic002G145800 Sobic002G145800 Sobic001G087600--Sobic002G145800 Sobic002G154000 Sobic002G154000 Sobic001G087600--Sobic002G154000 Sobic003G416700 Sobic003G416700 Sobic001G087600--Sobic003G416700 Sobic002G430300 Sobic002G430300 Sobic001G087600--Sobic002G430300 Sobic005G167700 Sobic005G167700 Sobic001G087600--Sobic005G167700 Sobic002G371700 Sobic002G371700 Sobic001G087600--Sobic002G371700 Sobic008G140700--Sobic001G020000 Sobic008G140700--Sobic001G087600 Sobic008G140700--Sobic010G034100 Sobic008G140700--Sobic003G405500 Sobic003G312700 Sobic003G312700 Sobic008G140700--Sobic003G312700 Sobic003G152400 Sobic003G152400 Sobic008G140700--Sobic003G152400 Sobic006G234700 Sobic006G234700 Sobic008G140700--Sobic006G234700 Sobic002G227500 Sobic002G227500 Sobic008G140700--Sobic002G227500 Sobic010G059500 Sobic010G059500 Sobic008G140700--Sobic010G059500 Sobic002G371600 Sobic002G371600 Sobic006G029100--Sobic002G371600 Sobic002G160700 Sobic002G160700 Sobic006G029100--Sobic002G160700 Sobic002G386600 Sobic002G386600 Sobic006G029100--Sobic002G386600 Sobic004G141800 Sobic004G141800 Sobic006G029100--Sobic004G141800 Sobic003G256800 Sobic003G256800 Sobic006G029100--Sobic003G256800 Sobic003G308500 Sobic003G308500 Sobic006G029100--Sobic003G308500 Sobic001G373800 Sobic001G373800 Sobic006G029100--Sobic001G373800 Sobic001G200200 Sobic001G200200 Sobic006G029100--Sobic001G200200 Sobic006G029100--Sobic010G070600 Sobic010G034100--Sobic010G059500 Sobic001G035200 Sobic001G035200 Sobic010G034100--Sobic001G035200 Sobic009G192300 Sobic009G192300 Sobic010G034100--Sobic009G192300 Sobic001G405600 Sobic001G405600 Sobic010G034100--Sobic001G405600 Sobic009G084900 Sobic009G084900 Sobic010G034100--Sobic009G084900 Sobic001G283600 Sobic001G283600 Sobic010G034100--Sobic001G283600 Sobic010G034100--Sobic001G020000 Sobic006G252900 Sobic006G252900 Sobic010G034100--Sobic006G252900 Sobic010G034100--Sobic002G227500 Sobic003G043000 Sobic003G043000 Sobic003G241700--Sobic003G043000 Sobic003G296900 Sobic003G296900 Sobic003G241700--Sobic003G296900 Sobic009G228000 Sobic009G228000 Sobic003G241700--Sobic009G228000 Sobic004G209700 Sobic004G209700 Sobic003G241700--Sobic004G209700 Sobic004G265500 Sobic004G265500 Sobic003G241700--Sobic004G265500 Sobic003G241700--Sobic010G000800 Sobic003G241700--Sobic006G234700 Sobic004G213800 Sobic004G213800 Sobic003G241700--Sobic004G213800 Sobic003G241700--Sobic010G034100 Sobic001G145400 Sobic001G145400 Sobic003G405500--Sobic001G145400 Sobic003G405500--Sobic008G124800 Sobic003G405500--Sobic002G430300 Sobic003G405500--Sobic009G084900 Sobic006G166200 Sobic006G166200 Sobic003G405500--Sobic006G166200 Sobic003G405500--Sobic004G141800 Sobic006G077200 Sobic006G077200 Sobic003G405500--Sobic006G077200 Sobic003G405500--Sobic010G059500 Sobic003G405500--Sobic003G314700
Octagon: transcription factors


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