Gene annotation
Transcriptome id Sobic.004G106400.1,Sobic.004G106400.2
Synonym Sb04g008690
Functional annotation protein kinase domain containing protein, expressed
UniProt C5XYZ6
Pfam PF14381 PF07714
Panther DB PTHR23257 PTHR23257:SF435
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G58640 : Mitogen activated protein kinase kinase kinase-related
RAP-DB (Rice) LOC_Os02g14530.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a034481
Brachypodium KQJ94201
Barley HORVU6Hr1G045360.8 , HORVU6Hr1G045360.9 , HORVU6Hr1G045360.6 , HORVU6Hr1G045360.7 , HORVU6Hr1G045360.4 , HORVU6Hr1G045360.5 , HORVU6Hr1G045360.2 , HORVU6Hr1G045360.3 , HORVU6Hr1G045360.1 , HORVU6Hr1G045360.14 , HORVU6Hr1G045360.15 , HORVU6Hr1G045360.16 , HORVU6Hr1G045360.10 , HORVU6Hr1G045360.11 , HORVU6Hr1G045360.12 , HORVU6Hr1G045360.13
Wheat TraesCS6A02G190500 , TraesCS6A02G190500 , TraesCS6A02G190500 , TraesCS6A02G190500 , TraesCS6A02G190500 , TraesCS6D02G180500
Populus -


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cDNA sequences
Sobic.004G106400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G192600 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
2 Sobic.010G070600 DNA binding protein, putative, expressed -
3 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
4 Sobic.010G099800 growth regulator related protein, putative, expressed -
5 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
6 Sobic.002G364900 PPR repeat domain containing protein, putative, expressed -
7 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
8 Sobic.003G393200 expressed protein -
9 Sobic.003G113300 expressed protein -
10 Sobic.006G282200 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed K12666: OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
11 Sobic.004G060300 DNA binding protein, putative, expressed -
12 Sobic.003G016500 histone-lysine N-methyltransferase ATX5, putative, expressed -
13 Sobic.002G343200 homeodomain-like, putative, expressed -
14 Sobic.004G141800 expressed protein -
15 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
16 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
17 Sobic.006G170900 growth regulator related protein, putative, expressed -
18 Sobic.006G103700 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
19 Sobic.001G343000 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
20 Sobic.010G139500 phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase


Gene co-expression network
sample Sobic004G106400 Sobic004G106400 Sobic010G192600 Sobic010G192600 Sobic004G106400--Sobic010G192600 Sobic010G070600 Sobic010G070600 Sobic004G106400--Sobic010G070600 Sobic002G119600 Sobic002G119600 Sobic004G106400--Sobic002G119600 Sobic010G099800 Sobic010G099800 Sobic004G106400--Sobic010G099800 Sobic002G227500 Sobic002G227500 Sobic004G106400--Sobic002G227500 Sobic002G364900 Sobic002G364900 Sobic004G106400--Sobic002G364900 Sobic003G190200 Sobic003G190200 Sobic004G106400--Sobic003G190200 Sobic003G393200 Sobic003G393200 Sobic004G106400--Sobic003G393200 Sobic003G113300 Sobic003G113300 Sobic004G106400--Sobic003G113300 Sobic001G097900 Sobic001G097900 Sobic010G192600--Sobic001G097900 Sobic001G474400 Sobic001G474400 Sobic010G192600--Sobic001G474400 Sobic001G358500 Sobic001G358500 Sobic010G192600--Sobic001G358500 Sobic007G118500 Sobic007G118500 Sobic010G192600--Sobic007G118500 Sobic008G085700 Sobic008G085700 Sobic010G192600--Sobic008G085700 Sobic005G110499 Sobic005G110499 Sobic010G192600--Sobic005G110499 Sobic010G192600--Sobic002G364900 Sobic001G115700 Sobic001G115700 Sobic010G192600--Sobic001G115700 Sobic003G304400 Sobic003G304400 Sobic010G192600--Sobic003G304400 Sobic003G016500 Sobic003G016500 Sobic010G070600--Sobic003G016500 Sobic010G070600--Sobic002G119600 Sobic010G139500 Sobic010G139500 Sobic010G070600--Sobic010G139500 Sobic001G087600 Sobic001G087600 Sobic010G070600--Sobic001G087600 Sobic008G140700 Sobic008G140700 Sobic010G070600--Sobic008G140700 Sobic006G029100 Sobic006G029100 Sobic010G070600--Sobic006G029100 Sobic010G034100 Sobic010G034100 Sobic010G070600--Sobic010G034100 Sobic003G241700 Sobic003G241700 Sobic010G070600--Sobic003G241700 Sobic003G405500 Sobic003G405500 Sobic010G070600--Sobic003G405500 Sobic001G156900 Sobic001G156900 Sobic002G119600--Sobic001G156900 Sobic002G119600--Sobic010G139500 Sobic007G145400 Sobic007G145400 Sobic002G119600--Sobic007G145400 Sobic004G204100 Sobic004G204100 Sobic002G119600--Sobic004G204100 Sobic010G000800 Sobic010G000800 Sobic002G119600--Sobic010G000800 Sobic002G412700 Sobic002G412700 Sobic002G119600--Sobic002G412700 Sobic002G119600--Sobic005G110499 Sobic001G248100 Sobic001G248100 Sobic002G119600--Sobic001G248100 Sobic003G334700 Sobic003G334700 Sobic002G119600--Sobic003G334700 Sobic001G393700 Sobic001G393700 Sobic010G099800--Sobic001G393700 Sobic003G240700 Sobic003G240700 Sobic010G099800--Sobic003G240700 Sobic010G099800--Sobic001G474400 Sobic009G045200 Sobic009G045200 Sobic010G099800--Sobic009G045200 Sobic010G099800--Sobic003G405500 Sobic010G278600 Sobic010G278600 Sobic010G099800--Sobic010G278600 Sobic001G335900 Sobic001G335900 Sobic010G099800--Sobic001G335900 Sobic001G051700 Sobic001G051700 Sobic010G099800--Sobic001G051700 Sobic002G430300 Sobic002G430300 Sobic010G099800--Sobic002G430300 Sobic001G308400 Sobic001G308400 Sobic002G227500--Sobic001G308400 Sobic003G021600 Sobic003G021600 Sobic002G227500--Sobic003G021600 Sobic002G227500--Sobic001G156900 Sobic010G169900 Sobic010G169900 Sobic002G227500--Sobic010G169900 Sobic004G265500 Sobic004G265500 Sobic002G227500--Sobic004G265500 Sobic003G043000 Sobic003G043000 Sobic002G227500--Sobic003G043000 Sobic002G227500--Sobic003G405500 Sobic003G181700 Sobic003G181700 Sobic002G227500--Sobic003G181700 Sobic010G059500 Sobic010G059500 Sobic002G227500--Sobic010G059500 Sobic002G364900--Sobic003G304400 Sobic002G364900--Sobic010G192600 Sobic006G265600 Sobic006G265600 Sobic002G364900--Sobic006G265600 Sobic001G015400 Sobic001G015400 Sobic002G364900--Sobic001G015400 Sobic002G364900--Sobic002G227500 Sobic006G106300 Sobic006G106300 Sobic002G364900--Sobic006G106300 Sobic001G099900 Sobic001G099900 Sobic002G364900--Sobic001G099900 Sobic001G085800 Sobic001G085800 Sobic002G364900--Sobic001G085800 Sobic002G364900--Sobic001G474400 Sobic007G030100 Sobic007G030100 Sobic003G190200--Sobic007G030100 Sobic003G394500 Sobic003G394500 Sobic003G190200--Sobic003G394500 Sobic007G172700 Sobic007G172700 Sobic003G190200--Sobic007G172700 Sobic003G190200--Sobic003G021600 Sobic009G252300 Sobic009G252300 Sobic003G190200--Sobic009G252300 Sobic001G424800 Sobic001G424800 Sobic003G190200--Sobic001G424800 Sobic003G190200--Sobic003G393200 Sobic003G428000 Sobic003G428000 Sobic003G190200--Sobic003G428000 Sobic001G385000 Sobic001G385000 Sobic003G190200--Sobic001G385000 Sobic003G393200--Sobic003G190200 Sobic005G123400 Sobic005G123400 Sobic003G393200--Sobic005G123400 Sobic001G051400 Sobic001G051400 Sobic003G393200--Sobic001G051400 Sobic006G237500 Sobic006G237500 Sobic003G393200--Sobic006G237500 Sobic002G066800 Sobic002G066800 Sobic003G393200--Sobic002G066800 Sobic005G087300 Sobic005G087300 Sobic003G393200--Sobic005G087300 Sobic001G043200 Sobic001G043200 Sobic003G393200--Sobic001G043200 Sobic001G343000 Sobic001G343000 Sobic003G393200--Sobic001G343000 Sobic009G059400 Sobic009G059400 Sobic003G393200--Sobic009G059400 Sobic009G122500 Sobic009G122500 Sobic003G113300--Sobic009G122500 Sobic002G296400 Sobic002G296400 Sobic003G113300--Sobic002G296400 Sobic002G014800 Sobic002G014800 Sobic003G113300--Sobic002G014800 Sobic003G113300--Sobic001G474400 Sobic001G030000 Sobic001G030000 Sobic003G113300--Sobic001G030000 Sobic005G114500 Sobic005G114500 Sobic003G113300--Sobic005G114500 Sobic003G113300--Sobic007G030100 Sobic003G113300--Sobic003G393200 Sobic003G113300--Sobic001G051400
Octagon: transcription factors


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