Gene annotation
Transcriptome id Sobic.006G282200.1,Sobic.006G282200.2
Synonym Sb06g034250
Functional annotation dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed
UniProt A0A1B6PPD4
Pfam PF04597
Panther DB PTHR21049
NCBI CDD KOG2291; Oligosaccharyltransferase, alpha subunit (ribophorin I)
KEGG Orthology K12666; OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
Gene Ontology GO:0016021; integral component of membrane GO:0006486protein glycosylation GO:0005783endoplasmic reticulum GO:0004579dolichyl-diphosphooligosaccharide-protein glycotransferase activity


Orthologs (automatic annotation)
TAIR AT2G01720 : Ribophorin I
RAP-DB (Rice) LOC_Os05g23600.1 : dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed
MaizeGDB (Corn) Zm00025a010576
Brachypodium KQJ81403
Barley HORVU2Hr1G127740.3 , HORVU2Hr1G127740.2 , HORVU2Hr1G127740.1 , HORVU2Hr1G127740.4
Wheat TraesCS2B02G616300 , TraesCS2D02G566500 , TraesCSU02G137700
Populus -


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cDNA sequences
Sobic.006G282200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
2 Sobic.003G397900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed K12667: SWP1, oligosaccharyltransferase complex subunit delta (ribophorin II)
3 Sobic.010G192600 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
4 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
5 Sobic.003G304400 NLI interacting factor-like phosphatase, putative, expressed K17496: mitochondrial import inner membrane translocase subunit TIM50
6 Sobic.002G343200 homeodomain-like, putative, expressed -
7 Sobic.002G199400 growth regulator related protein, putative, expressed -
8 Sobic.003G150900 protein transport protein-related, putative, expressed -
9 Sobic.004G151200 RNA-binding protein-like, putative, expressed -
10 Sobic.001G455000 glycosyl hydrolase, family 31, putative, expressed K05546: mannosyl-oligosaccharide alpha-1,3-glucosidase
11 Sobic.005G114800 protein transport protein, putative, expressed K14007: protein transport protein SEC24
12 Sobic.002G075900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDasubunit precursor, putative, expressed K12670: oligosaccharyltransferase complex subunit beta
13 Sobic.003G005900 abscisic acid insensitive 8, putative, expressed -
14 Sobic.007G146600 conserved oligomeric Golgi complex component 3, putative, expressed -
15 Sobic.002G399900 OsRhmbd13 - Putative Rhomboid homologue, expressed -
16 Sobic.001G358500 GA20734-PA, putative, expressed -
17 Sobic.008G019532 - -
18 Sobic.005G110499 - K14006: protein transport protein SEC23
19 Sobic.007G022700 proteasome subunit, putative, expressed K12177: COPS3, COP9 signalosome complex subunit 3
20 Sobic.002G398500 Mo25, putative, expressed K08272: CAB39, calcium binding protein 39


Gene co-expression network
sample Sobic006G282200 Sobic006G282200 Sobic006G265600 Sobic006G265600 Sobic006G282200--Sobic006G265600 Sobic003G397900 Sobic003G397900 Sobic006G282200--Sobic003G397900 Sobic010G192600 Sobic010G192600 Sobic006G282200--Sobic010G192600 Sobic001G474400 Sobic001G474400 Sobic006G282200--Sobic001G474400 Sobic003G304400 Sobic003G304400 Sobic006G282200--Sobic003G304400 Sobic002G343200 Sobic002G343200 Sobic006G282200--Sobic002G343200 Sobic002G199400 Sobic002G199400 Sobic006G282200--Sobic002G199400 Sobic003G150900 Sobic003G150900 Sobic006G282200--Sobic003G150900 Sobic004G151200 Sobic004G151200 Sobic006G282200--Sobic004G151200 Sobic006G265600--Sobic003G397900 Sobic006G265600--Sobic001G474400 Sobic002G399900 Sobic002G399900 Sobic006G265600--Sobic002G399900 Sobic003G005900 Sobic003G005900 Sobic006G265600--Sobic003G005900 Sobic001G151600 Sobic001G151600 Sobic006G265600--Sobic001G151600 Sobic002G075900 Sobic002G075900 Sobic006G265600--Sobic002G075900 Sobic002G160700 Sobic002G160700 Sobic006G265600--Sobic002G160700 Sobic009G120500 Sobic009G120500 Sobic006G265600--Sobic009G120500 Sobic002G364900 Sobic002G364900 Sobic006G265600--Sobic002G364900 Sobic001G455000 Sobic001G455000 Sobic003G397900--Sobic001G455000 Sobic003G397900--Sobic006G265600 Sobic003G397900--Sobic001G474400 Sobic003G397900--Sobic003G304400 Sobic003G397900--Sobic002G075900 Sobic001G445500 Sobic001G445500 Sobic003G397900--Sobic001G445500 Sobic003G397900--Sobic001G151600 Sobic001G015400 Sobic001G015400 Sobic003G397900--Sobic001G015400 Sobic010G223400 Sobic010G223400 Sobic003G397900--Sobic010G223400 Sobic001G097900 Sobic001G097900 Sobic010G192600--Sobic001G097900 Sobic010G192600--Sobic001G474400 Sobic001G358500 Sobic001G358500 Sobic010G192600--Sobic001G358500 Sobic007G118500 Sobic007G118500 Sobic010G192600--Sobic007G118500 Sobic008G085700 Sobic008G085700 Sobic010G192600--Sobic008G085700 Sobic005G110499 Sobic005G110499 Sobic010G192600--Sobic005G110499 Sobic010G192600--Sobic002G364900 Sobic001G115700 Sobic001G115700 Sobic010G192600--Sobic001G115700 Sobic010G192600--Sobic003G304400 Sobic001G474400--Sobic005G110499 Sobic001G474400--Sobic003G397900 Sobic007G145400 Sobic007G145400 Sobic001G474400--Sobic007G145400 Sobic001G474400--Sobic001G097900 Sobic005G114500 Sobic005G114500 Sobic001G474400--Sobic005G114500 Sobic005G106200 Sobic005G106200 Sobic001G474400--Sobic005G106200 Sobic001G474400--Sobic010G223400 Sobic001G467100 Sobic001G467100 Sobic001G474400--Sobic001G467100 Sobic001G474400--Sobic006G265600 Sobic003G304400--Sobic002G364900 Sobic003G304400--Sobic003G397900 Sobic002G398700 Sobic002G398700 Sobic003G304400--Sobic002G398700 Sobic003G304400--Sobic001G474400 Sobic002G150700 Sobic002G150700 Sobic003G304400--Sobic002G150700 Sobic003G304400--Sobic010G192600 Sobic003G202100 Sobic003G202100 Sobic003G304400--Sobic003G202100 Sobic003G304400--Sobic001G015400 Sobic003G304400--Sobic006G265600 Sobic003G297700 Sobic003G297700 Sobic002G343200--Sobic003G297700 Sobic007G016900 Sobic007G016900 Sobic002G343200--Sobic007G016900 Sobic002G343200--Sobic006G282200 Sobic002G386900 Sobic002G386900 Sobic002G343200--Sobic002G386900 Sobic002G343200--Sobic003G304400 Sobic003G052800 Sobic003G052800 Sobic002G343200--Sobic003G052800 Sobic001G051400 Sobic001G051400 Sobic002G343200--Sobic001G051400 Sobic005G133800 Sobic005G133800 Sobic002G343200--Sobic005G133800 Sobic002G220200 Sobic002G220200 Sobic002G343200--Sobic002G220200 Sobic002G199400--Sobic002G160700 Sobic002G199400--Sobic001G151600 Sobic001G469200 Sobic001G469200 Sobic002G199400--Sobic001G469200 Sobic002G199400--Sobic001G358500 Sobic006G259900 Sobic006G259900 Sobic002G199400--Sobic006G259900 Sobic002G199400--Sobic006G282200 Sobic005G175000 Sobic005G175000 Sobic002G199400--Sobic005G175000 Sobic004G030400 Sobic004G030400 Sobic002G199400--Sobic004G030400 Sobic005G144201 Sobic005G144201 Sobic002G199400--Sobic005G144201 Sobic005G114800 Sobic005G114800 Sobic003G150900--Sobic005G114800 Sobic009G166600 Sobic009G166600 Sobic003G150900--Sobic009G166600 Sobic001G005600 Sobic001G005600 Sobic003G150900--Sobic001G005600 Sobic006G139100 Sobic006G139100 Sobic003G150900--Sobic006G139100 Sobic001G042200 Sobic001G042200 Sobic003G150900--Sobic001G042200 Sobic007G146600 Sobic007G146600 Sobic003G150900--Sobic007G146600 Sobic008G021000 Sobic008G021000 Sobic003G150900--Sobic008G021000 Sobic010G077500 Sobic010G077500 Sobic003G150900--Sobic010G077500 Sobic009G160600 Sobic009G160600 Sobic003G150900--Sobic009G160600 Sobic004G151200--Sobic001G455000 Sobic004G277400 Sobic004G277400 Sobic004G151200--Sobic004G277400 Sobic003G130900 Sobic003G130900 Sobic004G151200--Sobic003G130900 Sobic004G151200--Sobic003G397900 Sobic004G151200--Sobic003G005900 Sobic004G151200--Sobic001G151600 Sobic004G151200--Sobic001G445500 Sobic005G022100 Sobic005G022100 Sobic004G151200--Sobic005G022100 Sobic004G151200--Sobic006G265600
Octagon: transcription factors


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