Gene annotation
Transcriptome id Sobic.002G199400.1
Synonym Sb02g024540
Functional annotation growth regulator related protein, putative, expressed
UniProt C5XC90
Pfam PF10250
Panther DB PTHR31933 PTHR31933:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24530 : O-fucosyltransferase family protein
RAP-DB (Rice) LOC_Os09g24570.1 : growth regulator related protein, putative, expressed
MaizeGDB (Corn) Zm00025a046951
Brachypodium KQJ90202
Barley HORVU5Hr1G066300.1 , HORVU5Hr1G066270.1
Wheat TraesCS5A02G229200 , TraesCS5D02G238400 , TraesCS5D02G238400 , TraesCS5B02G227800
Populus PNT26415 , PNT26417 , PNT26416


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cDNA sequences
Sobic.002G199400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G160700 WD domain, G-beta repeat domain containing protein, expressed K12880: THO complex subunit 3
2 Sobic.001G151600 OsRhmbd9 - Putative Rhomboid homologue, expressed -
3 Sobic.001G469200 proteasome subunit, putative, expressed K12178: COPS4, COP9 signalosome complex subunit 4
4 Sobic.001G358500 GA20734-PA, putative, expressed -
5 Sobic.006G259900 reticulon domain containing protein, putative, expressed -
6 Sobic.006G282200 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed K12666: OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
7 Sobic.005G175000 glutathione S-transferase, N-terminal domain containing protein, expressed K00799: GST, glutathione S-transferase
8 Sobic.004G030400 expressed protein -
9 Sobic.005G144201 - -
10 Sobic.002G075900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDasubunit precursor, putative, expressed K12670: oligosaccharyltransferase complex subunit beta
11 Sobic.005G178300 peptidyl-prolyl cis-trans isomerase, putative, expressed -
12 Sobic.001G004200 uncharacterized protein yeiN, putative, expressed K16329: pseudouridylate synthase
13 Sobic.005G115500 bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed K13998: dihydrofolate reductase / thymidylate synthase
14 Sobic.001G473800 trpH, putative, expressed K07053: 3',5'-nucleoside bisphosphate phosphatase
15 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
16 Sobic.001G487100 RNA recognition motif containing protein, putative, expressed -
17 Sobic.010G192600 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
18 Sobic.002G408900 adenyl cyclase, putative, expressed -
19 Sobic.005G133800 NEF1, putative, expressed -
20 Sobic.003G304400 NLI interacting factor-like phosphatase, putative, expressed K17496: mitochondrial import inner membrane translocase subunit TIM50


Gene co-expression network
sample Sobic002G199400 Sobic002G199400 Sobic002G160700 Sobic002G160700 Sobic002G199400--Sobic002G160700 Sobic001G151600 Sobic001G151600 Sobic002G199400--Sobic001G151600 Sobic001G469200 Sobic001G469200 Sobic002G199400--Sobic001G469200 Sobic001G358500 Sobic001G358500 Sobic002G199400--Sobic001G358500 Sobic006G259900 Sobic006G259900 Sobic002G199400--Sobic006G259900 Sobic006G282200 Sobic006G282200 Sobic002G199400--Sobic006G282200 Sobic005G175000 Sobic005G175000 Sobic002G199400--Sobic005G175000 Sobic004G030400 Sobic004G030400 Sobic002G199400--Sobic004G030400 Sobic005G144201 Sobic005G144201 Sobic002G199400--Sobic005G144201 Sobic002G160700--Sobic001G151600 Sobic002G371600 Sobic002G371600 Sobic002G160700--Sobic002G371600 Sobic006G029100 Sobic006G029100 Sobic002G160700--Sobic006G029100 Sobic001G248100 Sobic001G248100 Sobic002G160700--Sobic001G248100 Sobic006G265600 Sobic006G265600 Sobic002G160700--Sobic006G265600 Sobic002G160700--Sobic002G199400 Sobic002G408900 Sobic002G408900 Sobic002G160700--Sobic002G408900 Sobic002G160700--Sobic004G030400 Sobic005G115500 Sobic005G115500 Sobic002G160700--Sobic005G115500 Sobic001G151600--Sobic002G160700 Sobic003G397900 Sobic003G397900 Sobic001G151600--Sobic003G397900 Sobic001G151600--Sobic006G265600 Sobic001G474400 Sobic001G474400 Sobic001G151600--Sobic001G474400 Sobic002G070600 Sobic002G070600 Sobic001G151600--Sobic002G070600 Sobic009G003700 Sobic009G003700 Sobic001G151600--Sobic009G003700 Sobic004G151200 Sobic004G151200 Sobic001G151600--Sobic004G151200 Sobic001G151600--Sobic002G199400 Sobic001G117800 Sobic001G117800 Sobic001G151600--Sobic001G117800 Sobic001G469200--Sobic002G199400 Sobic001G115500 Sobic001G115500 Sobic001G469200--Sobic001G115500 Sobic001G085800 Sobic001G085800 Sobic001G469200--Sobic001G085800 Sobic001G469200--Sobic005G115500 Sobic003G132000 Sobic003G132000 Sobic001G469200--Sobic003G132000 Sobic004G075200 Sobic004G075200 Sobic001G469200--Sobic004G075200 Sobic010G108900 Sobic010G108900 Sobic001G469200--Sobic010G108900 Sobic006G245700 Sobic006G245700 Sobic001G469200--Sobic006G245700 Sobic001G487100 Sobic001G487100 Sobic001G469200--Sobic001G487100 Sobic001G428800 Sobic001G428800 Sobic001G358500--Sobic001G428800 Sobic010G192600 Sobic010G192600 Sobic001G358500--Sobic010G192600 Sobic008G018500 Sobic008G018500 Sobic001G358500--Sobic008G018500 Sobic008G085700 Sobic008G085700 Sobic001G358500--Sobic008G085700 Sobic001G467100 Sobic001G467100 Sobic001G358500--Sobic001G467100 Sobic003G182300 Sobic003G182300 Sobic001G358500--Sobic003G182300 Sobic006G039400 Sobic006G039400 Sobic001G358500--Sobic006G039400 Sobic001G049400 Sobic001G049400 Sobic001G358500--Sobic001G049400 Sobic001G211900 Sobic001G211900 Sobic001G358500--Sobic001G211900 Sobic003G261800 Sobic003G261800 Sobic006G259900--Sobic003G261800 Sobic006G259900--Sobic002G199400 Sobic007G217400 Sobic007G217400 Sobic006G259900--Sobic007G217400 Sobic007G022700 Sobic007G022700 Sobic006G259900--Sobic007G022700 Sobic001G073600 Sobic001G073600 Sobic006G259900--Sobic001G073600 Sobic002G141700 Sobic002G141700 Sobic006G259900--Sobic002G141700 Sobic002G087000 Sobic002G087000 Sobic006G259900--Sobic002G087000 Sobic001G035400 Sobic001G035400 Sobic006G259900--Sobic001G035400 Sobic009G207200 Sobic009G207200 Sobic006G259900--Sobic009G207200 Sobic006G282200--Sobic006G265600 Sobic006G282200--Sobic003G397900 Sobic006G282200--Sobic010G192600 Sobic006G282200--Sobic001G474400 Sobic003G304400 Sobic003G304400 Sobic006G282200--Sobic003G304400 Sobic002G343200 Sobic002G343200 Sobic006G282200--Sobic002G343200 Sobic006G282200--Sobic002G199400 Sobic003G150900 Sobic003G150900 Sobic006G282200--Sobic003G150900 Sobic006G282200--Sobic004G151200 Sobic005G175000--Sobic002G199400 Sobic005G175000--Sobic001G487100 Sobic001G506000 Sobic001G506000 Sobic005G175000--Sobic001G506000 Sobic003G046300 Sobic003G046300 Sobic005G175000--Sobic003G046300 Sobic006G188500 Sobic006G188500 Sobic005G175000--Sobic006G188500 Sobic005G175000--Sobic001G469200 Sobic001G408600 Sobic001G408600 Sobic005G175000--Sobic001G408600 Sobic005G175000--Sobic003G132000 Sobic001G456800 Sobic001G456800 Sobic005G175000--Sobic001G456800 Sobic004G030400--Sobic002G160700 Sobic004G356200 Sobic004G356200 Sobic004G030400--Sobic004G356200 Sobic001G200200 Sobic001G200200 Sobic004G030400--Sobic001G200200 Sobic004G030400--Sobic002G199400 Sobic001G123600 Sobic001G123600 Sobic004G030400--Sobic001G123600 Sobic002G142700 Sobic002G142700 Sobic004G030400--Sobic002G142700 Sobic002G208400 Sobic002G208400 Sobic004G030400--Sobic002G208400 Sobic003G388000 Sobic003G388000 Sobic004G030400--Sobic003G388000 Sobic002G386600 Sobic002G386600 Sobic004G030400--Sobic002G386600 Sobic005G144201--Sobic008G085700 Sobic005G144201--Sobic001G358500 Sobic001G237600 Sobic001G237600 Sobic005G144201--Sobic001G237600 Sobic004G094700 Sobic004G094700 Sobic005G144201--Sobic004G094700 Sobic005G144201--Sobic002G199400 Sobic005G144201--Sobic003G132000 Sobic005G144201--Sobic005G115500 Sobic003G363700 Sobic003G363700 Sobic005G144201--Sobic003G363700 Sobic009G089700 Sobic009G089700 Sobic005G144201--Sobic009G089700
Octagon: transcription factors


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