Gene annotation
Transcriptome id Sobic.005G178300.1
Synonym Sb05g023760
Functional annotation peptidyl-prolyl cis-trans isomerase, putative, expressed
UniProt C5Y5V5
Pfam PF00160
Panther DB PTHR11071 PTHR11071:SF17
NCBI CDD KOG0881; Cyclophilin type peptidyl-prolyl cis-trans isomerase KOG0884Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase
KEGG Orthology -
Gene Ontology GO:0006457; protein folding GO:0003755peptidyl-prolyl cis-trans isomerase activity GO:0000413protein peptidyl-prolyl isomerization


Orthologs (automatic annotation)
TAIR AT1G26940 : Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os11g38990.2 : peptidyl-prolyl cis-trans isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a048959 , Zm00025a015862 , Zm00025a006433
Brachypodium KQJ87895 , PNT63321 , KQJ87902 , KQJ87896 , KQJ87900 , KQJ87901 , KQJ87898 , KQJ87899 , PNT63320 , PNT63322 , KQJ87897
Barley HORVU4Hr1G031870.9 , HORVU4Hr1G031870.8 , HORVU4Hr1G031870.3 , HORVU4Hr1G031870.2 , HORVU4Hr1G031870.1 , HORVU4Hr1G031870.7 , HORVU4Hr1G031870.6 , HORVU4Hr1G031870.5 , HORVU4Hr1G031870.4
Wheat TraesCS4A02G168400 , TraesCS4D02G153700 , TraesCSU02G067400 , TraesCS3D02G112800
Populus -


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cDNA sequences
Sobic.005G178300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G050500 methylisocitrate lyase 2, putative, expressed -
2 Sobic.002G199400 growth regulator related protein, putative, expressed -
3 Sobic.003G085500 signal peptidase complex subunit 3, putative, expressed K12948: SPCS3, signal peptidase complex subunit 3
4 Sobic.010G002800 AGAP000326-PA, putative, expressed K18163: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
5 Sobic.007G165300 SNARE domain containing protein, putative, expressed K08504: blocked early in transport 1
6 Sobic.006G259900 reticulon domain containing protein, putative, expressed -
7 Sobic.003G388700 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
8 Sobic.005G112100 ER lumen protein retaining receptor, putative, expressed K10949: ER lumen protein retaining receptor
9 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
10 Sobic.002G072300 5-nucleotidase surE, putative, expressed K03787: 5'-nucleotidase
11 Sobic.007G022700 proteasome subunit, putative, expressed K12177: COPS3, COP9 signalosome complex subunit 3
12 Sobic.005G175000 glutathione S-transferase, N-terminal domain containing protein, expressed K00799: GST, glutathione S-transferase
13 Sobic.006G129900 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
14 Sobic.004G030400 expressed protein -
15 Sobic.004G354100 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I
16 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
17 Sobic.003G122000 BCAS2 protein, putative, expressed K12861: pre-mRNA-splicing factor SPF27
18 Sobic.002G071100 expressed protein K17408: DAP3, small subunit ribosomal protein S29
19 Sobic.003G202100 Uncharacterized ACR, COG1565 containing protein, putative, expressed K18164: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
20 Sobic.003G392600 expressed protein -


Gene co-expression network
sample Sobic005G178300 Sobic005G178300 Sobic006G050500 Sobic006G050500 Sobic005G178300--Sobic006G050500 Sobic002G199400 Sobic002G199400 Sobic005G178300--Sobic002G199400 Sobic003G085500 Sobic003G085500 Sobic005G178300--Sobic003G085500 Sobic010G002800 Sobic010G002800 Sobic005G178300--Sobic010G002800 Sobic007G165300 Sobic007G165300 Sobic005G178300--Sobic007G165300 Sobic006G259900 Sobic006G259900 Sobic005G178300--Sobic006G259900 Sobic003G388700 Sobic003G388700 Sobic005G178300--Sobic003G388700 Sobic005G112100 Sobic005G112100 Sobic005G178300--Sobic005G112100 Sobic010G258000 Sobic010G258000 Sobic005G178300--Sobic010G258000 Sobic006G050500--Sobic005G178300 Sobic002G272500 Sobic002G272500 Sobic006G050500--Sobic002G272500 Sobic006G050500--Sobic007G165300 Sobic006G129900 Sobic006G129900 Sobic006G050500--Sobic006G129900 Sobic010G073500 Sobic010G073500 Sobic006G050500--Sobic010G073500 Sobic003G170300 Sobic003G170300 Sobic006G050500--Sobic003G170300 Sobic006G050500--Sobic003G085500 Sobic001G506000 Sobic001G506000 Sobic006G050500--Sobic001G506000 Sobic003G113900 Sobic003G113900 Sobic006G050500--Sobic003G113900 Sobic002G160700 Sobic002G160700 Sobic002G199400--Sobic002G160700 Sobic001G151600 Sobic001G151600 Sobic002G199400--Sobic001G151600 Sobic001G469200 Sobic001G469200 Sobic002G199400--Sobic001G469200 Sobic001G358500 Sobic001G358500 Sobic002G199400--Sobic001G358500 Sobic002G199400--Sobic006G259900 Sobic006G282200 Sobic006G282200 Sobic002G199400--Sobic006G282200 Sobic005G175000 Sobic005G175000 Sobic002G199400--Sobic005G175000 Sobic004G030400 Sobic004G030400 Sobic002G199400--Sobic004G030400 Sobic005G144201 Sobic005G144201 Sobic002G199400--Sobic005G144201 Sobic001G485300 Sobic001G485300 Sobic003G085500--Sobic001G485300 Sobic001G352800 Sobic001G352800 Sobic003G085500--Sobic001G352800 Sobic003G085500--Sobic010G002800 Sobic004G354100 Sobic004G354100 Sobic003G085500--Sobic004G354100 Sobic007G022700 Sobic007G022700 Sobic003G085500--Sobic007G022700 Sobic002G392400 Sobic002G392400 Sobic003G085500--Sobic002G392400 Sobic002G276800 Sobic002G276800 Sobic003G085500--Sobic002G276800 Sobic003G085500--Sobic003G388700 Sobic004G186100 Sobic004G186100 Sobic003G085500--Sobic004G186100 Sobic010G002800--Sobic001G352800 Sobic010G002800--Sobic003G085500 Sobic010G002800--Sobic003G388700 Sobic002G232400 Sobic002G232400 Sobic010G002800--Sobic002G232400 Sobic001G309200 Sobic001G309200 Sobic010G002800--Sobic001G309200 Sobic010G002800--Sobic004G186100 Sobic002G222200 Sobic002G222200 Sobic010G002800--Sobic002G222200 Sobic001G073600 Sobic001G073600 Sobic010G002800--Sobic001G073600 Sobic004G007700 Sobic004G007700 Sobic010G002800--Sobic004G007700 Sobic004G184000 Sobic004G184000 Sobic007G165300--Sobic004G184000 Sobic007G217400 Sobic007G217400 Sobic007G165300--Sobic007G217400 Sobic009G207200 Sobic009G207200 Sobic007G165300--Sobic009G207200 Sobic007G165300--Sobic003G170300 Sobic003G028100 Sobic003G028100 Sobic007G165300--Sobic003G028100 Sobic007G165300--Sobic001G506000 Sobic007G165300--Sobic005G178300 Sobic009G201800 Sobic009G201800 Sobic007G165300--Sobic009G201800 Sobic007G165300--Sobic010G258000 Sobic003G261800 Sobic003G261800 Sobic006G259900--Sobic003G261800 Sobic006G259900--Sobic002G199400 Sobic006G259900--Sobic007G217400 Sobic006G259900--Sobic007G022700 Sobic006G259900--Sobic001G073600 Sobic002G141700 Sobic002G141700 Sobic006G259900--Sobic002G141700 Sobic002G087000 Sobic002G087000 Sobic006G259900--Sobic002G087000 Sobic001G035400 Sobic001G035400 Sobic006G259900--Sobic001G035400 Sobic006G259900--Sobic009G207200 Sobic007G119600 Sobic007G119600 Sobic003G388700--Sobic007G119600 Sobic003G388700--Sobic001G073600 Sobic003G135600 Sobic003G135600 Sobic003G388700--Sobic003G135600 Sobic009G191400 Sobic009G191400 Sobic003G388700--Sobic009G191400 Sobic002G079700 Sobic002G079700 Sobic003G388700--Sobic002G079700 Sobic001G473400 Sobic001G473400 Sobic003G388700--Sobic001G473400 Sobic003G388700--Sobic010G002800 Sobic003G388700--Sobic010G258000 Sobic006G041800 Sobic006G041800 Sobic003G388700--Sobic006G041800 Sobic005G112100--Sobic002G222200 Sobic005G112100--Sobic010G258000 Sobic005G112100--Sobic007G119600 Sobic005G112100--Sobic001G473400 Sobic005G112100--Sobic005G178300 Sobic005G112100--Sobic003G388700 Sobic002G186300 Sobic002G186300 Sobic005G112100--Sobic002G186300 Sobic005G112100--Sobic001G073600 Sobic008G150300 Sobic008G150300 Sobic005G112100--Sobic008G150300 Sobic010G258000--Sobic001G473400 Sobic006G203900 Sobic006G203900 Sobic010G258000--Sobic006G203900 Sobic010G258000--Sobic001G035400 Sobic010G258000--Sobic001G073600 Sobic010G258000--Sobic003G388700 Sobic009G016500 Sobic009G016500 Sobic010G258000--Sobic009G016500 Sobic010G258000--Sobic003G170300 Sobic008G136800 Sobic008G136800 Sobic010G258000--Sobic008G136800 Sobic010G258000--Sobic007G119600
Octagon: transcription factors


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