Gene annotation
Transcriptome id Sobic.003G393200.1
Synonym Sb03g043070
Functional annotation expressed protein
UniProt C5XFH0
Pfam -
Panther DB PTHR31485 PTHR31485:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G01720 : -
RAP-DB (Rice) LOC_Os01g67750.1 : expressed protein
MaizeGDB (Corn) Zm00025a026378 , Zm00025a036666
Brachypodium KQK11081 , KQK11080 , PNT73403 , PNT73404
Barley HORVU3Hr1G088630.18 , HORVU3Hr1G088630.19 , HORVU3Hr1G088630.14 , HORVU3Hr1G088630.15 , HORVU3Hr1G088630.16 , HORVU3Hr1G088630.17 , HORVU3Hr1G088630.11 , HORVU3Hr1G088630.12 , HORVU3Hr1G088630.13 , HORVU3Hr1G088630.21 , HORVU3Hr1G088630.22 , HORVU3Hr1G088630.24 , HORVU3Hr1G088630.20 , HORVU3Hr1G088630.23
Wheat TraesCS3A02G391700 , TraesCS3D02G384600 , TraesCS3D02G384600 , TraesCS3B02G423700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
2 Sobic.005G123400 expressed protein -
3 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
4 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -
5 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
6 Sobic.005G087300 protein kinase family protein, putative, expressed -
7 Sobic.001G043200 expressed protein -
8 Sobic.001G343000 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
9 Sobic.009G059400 expressed protein -
10 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
11 Sobic.002G147200 esterase/lipase/thioesterase, putative, expressed -
12 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
13 Sobic.007G153500 metal cation transporter, putative, expressed K14713: SLC39A7, KE4, solute carrier family 39 (zinc transporter), member 7
14 Sobic.001G305900 GTP binding protein, putative, expressed -
15 Sobic.003G113300 expressed protein -
16 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
17 Sobic.003G297700 lipid-A-disaccharide synthase family protein, expressed K00748: lipid-A-disaccharide synthase
18 Sobic.006G198400 phosphoenolpyruvate carboxykinase, putative, expressed -
19 Sobic.001G455000 glycosyl hydrolase, family 31, putative, expressed K05546: mannosyl-oligosaccharide alpha-1,3-glucosidase
20 Sobic.003G010900 expressed protein -


Gene co-expression network
sample Sobic003G393200 Sobic003G393200 Sobic003G190200 Sobic003G190200 Sobic003G393200--Sobic003G190200 Sobic005G123400 Sobic005G123400 Sobic003G393200--Sobic005G123400 Sobic001G051400 Sobic001G051400 Sobic003G393200--Sobic001G051400 Sobic006G237500 Sobic006G237500 Sobic003G393200--Sobic006G237500 Sobic002G066800 Sobic002G066800 Sobic003G393200--Sobic002G066800 Sobic005G087300 Sobic005G087300 Sobic003G393200--Sobic005G087300 Sobic001G043200 Sobic001G043200 Sobic003G393200--Sobic001G043200 Sobic001G343000 Sobic001G343000 Sobic003G393200--Sobic001G343000 Sobic009G059400 Sobic009G059400 Sobic003G393200--Sobic009G059400 Sobic007G030100 Sobic007G030100 Sobic003G190200--Sobic007G030100 Sobic003G394500 Sobic003G394500 Sobic003G190200--Sobic003G394500 Sobic007G172700 Sobic007G172700 Sobic003G190200--Sobic007G172700 Sobic003G021600 Sobic003G021600 Sobic003G190200--Sobic003G021600 Sobic009G252300 Sobic009G252300 Sobic003G190200--Sobic009G252300 Sobic001G424800 Sobic001G424800 Sobic003G190200--Sobic001G424800 Sobic003G190200--Sobic003G393200 Sobic003G428000 Sobic003G428000 Sobic003G190200--Sobic003G428000 Sobic001G385000 Sobic001G385000 Sobic003G190200--Sobic001G385000 Sobic005G123400--Sobic006G237500 Sobic010G112600 Sobic010G112600 Sobic005G123400--Sobic010G112600 Sobic005G123400--Sobic003G393200 Sobic005G123400--Sobic001G043200 Sobic009G227100 Sobic009G227100 Sobic005G123400--Sobic009G227100 Sobic005G123400--Sobic009G252300 Sobic005G123400--Sobic007G030100 Sobic005G123400--Sobic003G190200 Sobic003G368400 Sobic003G368400 Sobic005G123400--Sobic003G368400 Sobic001G051400--Sobic002G066800 Sobic007G034200 Sobic007G034200 Sobic001G051400--Sobic007G034200 Sobic001G051400--Sobic003G393200 Sobic003G010900 Sobic003G010900 Sobic001G051400--Sobic003G010900 Sobic009G120400 Sobic009G120400 Sobic001G051400--Sobic009G120400 Sobic006G191200 Sobic006G191200 Sobic001G051400--Sobic006G191200 Sobic001G051400--Sobic005G087300 Sobic002G078100 Sobic002G078100 Sobic001G051400--Sobic002G078100 Sobic001G051400--Sobic005G123400 Sobic006G237500--Sobic005G123400 Sobic006G237500--Sobic003G393200 Sobic006G237500--Sobic007G030100 Sobic006G237500--Sobic010G112600 Sobic004G353300 Sobic004G353300 Sobic006G237500--Sobic004G353300 Sobic001G052100 Sobic001G052100 Sobic006G237500--Sobic001G052100 Sobic006G237500--Sobic001G051400 Sobic003G194800 Sobic003G194800 Sobic006G237500--Sobic003G194800 Sobic004G215600 Sobic004G215600 Sobic006G237500--Sobic004G215600 Sobic002G066800--Sobic001G051400 Sobic002G066800--Sobic005G087300 Sobic002G066800--Sobic002G078100 Sobic002G066800--Sobic003G393200 Sobic010G038900 Sobic010G038900 Sobic002G066800--Sobic010G038900 Sobic010G018900 Sobic010G018900 Sobic002G066800--Sobic010G018900 Sobic002G066800--Sobic003G010900 Sobic002G066800--Sobic006G191200 Sobic003G023200 Sobic003G023200 Sobic002G066800--Sobic003G023200 Sobic009G040250 Sobic009G040250 Sobic005G087300--Sobic009G040250 Sobic002G313100 Sobic002G313100 Sobic005G087300--Sobic002G313100 Sobic005G087300--Sobic002G066800 Sobic004G198300 Sobic004G198300 Sobic005G087300--Sobic004G198300 Sobic007G086600 Sobic007G086600 Sobic005G087300--Sobic007G086600 Sobic005G087300--Sobic003G393200 Sobic007G105700 Sobic007G105700 Sobic005G087300--Sobic007G105700 Sobic002G322400 Sobic002G322400 Sobic005G087300--Sobic002G322400 Sobic010G160300 Sobic010G160300 Sobic005G087300--Sobic010G160300 Sobic001G043200--Sobic005G123400 Sobic001G043200--Sobic003G190200 Sobic001G043200--Sobic003G021600 Sobic001G043200--Sobic003G394500 Sobic009G122500 Sobic009G122500 Sobic001G043200--Sobic009G122500 Sobic001G043200--Sobic007G030100 Sobic004G122900 Sobic004G122900 Sobic001G043200--Sobic004G122900 Sobic009G154900 Sobic009G154900 Sobic001G043200--Sobic009G154900 Sobic001G043200--Sobic003G194800 Sobic007G146600 Sobic007G146600 Sobic001G343000--Sobic007G146600 Sobic001G343000--Sobic003G393200 Sobic007G048700 Sobic007G048700 Sobic001G343000--Sobic007G048700 Sobic002G182000 Sobic002G182000 Sobic001G343000--Sobic002G182000 Sobic001G343000--Sobic007G030100 Sobic010G028400 Sobic010G028400 Sobic001G343000--Sobic010G028400 Sobic002G070300 Sobic002G070300 Sobic001G343000--Sobic002G070300 Sobic008G132200 Sobic008G132200 Sobic001G343000--Sobic008G132200 Sobic001G012900 Sobic001G012900 Sobic001G343000--Sobic001G012900 Sobic009G017200 Sobic009G017200 Sobic009G059400--Sobic009G017200 Sobic005G198200 Sobic005G198200 Sobic009G059400--Sobic005G198200 Sobic007G218600 Sobic007G218600 Sobic009G059400--Sobic007G218600 Sobic006G144000 Sobic006G144000 Sobic009G059400--Sobic006G144000 Sobic009G059400--Sobic003G393200 Sobic009G125000 Sobic009G125000 Sobic009G059400--Sobic009G125000 Sobic004G345400 Sobic004G345400 Sobic009G059400--Sobic004G345400 Sobic007G148400 Sobic007G148400 Sobic009G059400--Sobic007G148400 Sobic006G224300 Sobic006G224300 Sobic009G059400--Sobic006G224300
Octagon: transcription factors


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