Gene annotation
Transcriptome id Sobic.006G198400.2
Synonym Sb06g027055
Functional annotation phosphoenolpyruvate carboxykinase, putative, expressed
UniProt A0A1B6PMY4
Pfam PF01293
Panther DB PTHR30031 PTHR30031:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006094; gluconeogenesis GO:0005524ATP binding GO:0004612phosphoenolpyruvate carboxykinase (ATP) activity


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g50208.1 : phosphoenolpyruvate carboxykinase, putative, expressed
MaizeGDB (Corn) Zm00025a056892
Brachypodium KQJ84310
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G297700 lipid-A-disaccharide synthase family protein, expressed K00748: lipid-A-disaccharide synthase
2 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
3 Sobic.001G497600 PPR repeat domain containing protein, putative, expressed -
4 Sobic.005G087300 protein kinase family protein, putative, expressed -
5 Sobic.003G393200 expressed protein -
6 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
7 Sobic.009G040250 - -
8 Sobic.002G147200 esterase/lipase/thioesterase, putative, expressed -
9 Sobic.007G153500 metal cation transporter, putative, expressed K14713: SLC39A7, KE4, solute carrier family 39 (zinc transporter), member 7
10 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
11 Sobic.008G019532 - -
12 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
13 Sobic.006G204700 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed K10770: ALKBH8, alkylated DNA repair protein alkB homolog 8
14 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
15 Sobic.003G181700 GPI mannosyltransferase 2, putative, expressed K07542: GPI mannosyltransferase 2
16 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
17 Sobic.006G191200 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
18 Sobic.003G304400 NLI interacting factor-like phosphatase, putative, expressed K17496: mitochondrial import inner membrane translocase subunit TIM50
19 Sobic.001G340300 tentative name(PubMedID : 31536532)@expressed protein -
20 Sobic.006G112500 CAF1 family ribonuclease containing protein, putative, expressed K01148: PARN, poly(A)-specific ribonuclease


Gene co-expression network
sample Sobic006G198400 Sobic006G198400 Sobic003G297700 Sobic003G297700 Sobic006G198400--Sobic003G297700 Sobic003G021600 Sobic003G021600 Sobic006G198400--Sobic003G021600 Sobic001G497600 Sobic001G497600 Sobic006G198400--Sobic001G497600 Sobic005G087300 Sobic005G087300 Sobic006G198400--Sobic005G087300 Sobic003G393200 Sobic003G393200 Sobic006G198400--Sobic003G393200 Sobic009G194000 Sobic009G194000 Sobic006G198400--Sobic009G194000 Sobic009G040250 Sobic009G040250 Sobic006G198400--Sobic009G040250 Sobic002G147200 Sobic002G147200 Sobic006G198400--Sobic002G147200 Sobic007G153500 Sobic007G153500 Sobic006G198400--Sobic007G153500 Sobic003G297700--Sobic006G198400 Sobic003G297700--Sobic003G021600 Sobic002G343200 Sobic002G343200 Sobic003G297700--Sobic002G343200 Sobic003G297700--Sobic003G393200 Sobic001G051400 Sobic001G051400 Sobic003G297700--Sobic001G051400 Sobic003G297700--Sobic005G087300 Sobic002G066800 Sobic002G066800 Sobic003G297700--Sobic002G066800 Sobic010G086300 Sobic010G086300 Sobic003G297700--Sobic010G086300 Sobic006G237500 Sobic006G237500 Sobic003G297700--Sobic006G237500 Sobic003G021600--Sobic009G194000 Sobic003G181700 Sobic003G181700 Sobic003G021600--Sobic003G181700 Sobic003G190200 Sobic003G190200 Sobic003G021600--Sobic003G190200 Sobic002G227500 Sobic002G227500 Sobic003G021600--Sobic002G227500 Sobic009G040325 Sobic009G040325 Sobic003G021600--Sobic009G040325 Sobic003G021600--Sobic009G040250 Sobic003G394500 Sobic003G394500 Sobic003G021600--Sobic003G394500 Sobic001G308400 Sobic001G308400 Sobic003G021600--Sobic001G308400 Sobic001G043200 Sobic001G043200 Sobic003G021600--Sobic001G043200 Sobic001G501900 Sobic001G501900 Sobic001G497600--Sobic001G501900 Sobic002G213900 Sobic002G213900 Sobic001G497600--Sobic002G213900 Sobic009G046900 Sobic009G046900 Sobic001G497600--Sobic009G046900 Sobic002G060400 Sobic002G060400 Sobic001G497600--Sobic002G060400 Sobic009G156800 Sobic009G156800 Sobic001G497600--Sobic009G156800 Sobic003G004800 Sobic003G004800 Sobic001G497600--Sobic003G004800 Sobic009G186700 Sobic009G186700 Sobic001G497600--Sobic009G186700 Sobic005G063200 Sobic005G063200 Sobic001G497600--Sobic005G063200 Sobic001G497600--Sobic002G147200 Sobic005G087300--Sobic009G040250 Sobic002G313100 Sobic002G313100 Sobic005G087300--Sobic002G313100 Sobic005G087300--Sobic002G066800 Sobic004G198300 Sobic004G198300 Sobic005G087300--Sobic004G198300 Sobic007G086600 Sobic007G086600 Sobic005G087300--Sobic007G086600 Sobic005G087300--Sobic003G393200 Sobic007G105700 Sobic007G105700 Sobic005G087300--Sobic007G105700 Sobic002G322400 Sobic002G322400 Sobic005G087300--Sobic002G322400 Sobic010G160300 Sobic010G160300 Sobic005G087300--Sobic010G160300 Sobic003G393200--Sobic003G190200 Sobic005G123400 Sobic005G123400 Sobic003G393200--Sobic005G123400 Sobic003G393200--Sobic001G051400 Sobic003G393200--Sobic006G237500 Sobic003G393200--Sobic002G066800 Sobic003G393200--Sobic005G087300 Sobic003G393200--Sobic001G043200 Sobic001G343000 Sobic001G343000 Sobic003G393200--Sobic001G343000 Sobic009G059400 Sobic009G059400 Sobic003G393200--Sobic009G059400 Sobic009G194000--Sobic003G181700 Sobic009G194000--Sobic003G021600 Sobic001G490900 Sobic001G490900 Sobic009G194000--Sobic001G490900 Sobic010G169900 Sobic010G169900 Sobic009G194000--Sobic010G169900 Sobic004G122900 Sobic004G122900 Sobic009G194000--Sobic004G122900 Sobic009G194000--Sobic001G308400 Sobic009G194000--Sobic003G190200 Sobic006G060000 Sobic006G060000 Sobic009G194000--Sobic006G060000 Sobic001G141400 Sobic001G141400 Sobic009G194000--Sobic001G141400 Sobic009G040250--Sobic009G040325 Sobic009G040250--Sobic005G087300 Sobic009G040250--Sobic003G021600 Sobic006G012300 Sobic006G012300 Sobic009G040250--Sobic006G012300 Sobic009G040250--Sobic002G147200 Sobic009G040250--Sobic010G160300 Sobic009G040250--Sobic001G043200 Sobic002G304700 Sobic002G304700 Sobic009G040250--Sobic002G304700 Sobic006G191000 Sobic006G191000 Sobic009G040250--Sobic006G191000 Sobic007G030100 Sobic007G030100 Sobic002G147200--Sobic007G030100 Sobic002G147100 Sobic002G147100 Sobic002G147200--Sobic002G147100 Sobic002G147200--Sobic003G190200 Sobic002G147200--Sobic009G040250 Sobic002G147200--Sobic005G063200 Sobic003G428000 Sobic003G428000 Sobic002G147200--Sobic003G428000 Sobic003G117800 Sobic003G117800 Sobic002G147200--Sobic003G117800 Sobic001G114200 Sobic001G114200 Sobic002G147200--Sobic001G114200 Sobic001G385000 Sobic001G385000 Sobic002G147200--Sobic001G385000 Sobic002G076500 Sobic002G076500 Sobic007G153500--Sobic002G076500 Sobic007G153500--Sobic002G322400 Sobic007G153500--Sobic001G114200 Sobic002G392400 Sobic002G392400 Sobic007G153500--Sobic002G392400 Sobic007G153500--Sobic005G087300 Sobic007G153500--Sobic003G393200 Sobic001G025700 Sobic001G025700 Sobic007G153500--Sobic001G025700 Sobic001G455000 Sobic001G455000 Sobic007G153500--Sobic001G455000 Sobic007G153500--Sobic009G186700
Octagon: transcription factors


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