Gene annotation
Transcriptome id Sobic.005G087300.2
Synonym
Functional annotation protein kinase family protein, putative, expressed
UniProt A0A1Z5RHM6
Pfam PF00069
Panther DB PTHR24056 PTHR24056:SF225
NCBI CDD KOG0663; Protein kinase PITSLRE and related kinases
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G53050 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os11g13860.1 : cyclin-dependent kinase, putative, expressed
MaizeGDB (Corn) Zm00025a029541
Brachypodium -
Barley -
Wheat TraesCS4B02G089100 , TraesCS4B02G089100 , TraesCS4B02G089100 , TraesCS4D02G086800 , TraesCS4D02G086800 , TraesCS4D02G086800 , TraesCS4A02G227200 , TraesCS4A02G227200
Populus PNT42682


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G040250 - -
2 Sobic.002G313100 STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08838: serine/threonine-protein kinase 24/25/MST4
3 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
4 Sobic.004G198300 expressed protein -
5 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
6 Sobic.003G393200 expressed protein -
7 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
8 Sobic.002G322400 OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed -
9 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
10 Sobic.007G153500 metal cation transporter, putative, expressed K14713: SLC39A7, KE4, solute carrier family 39 (zinc transporter), member 7
11 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
12 Sobic.001G305900 GTP binding protein, putative, expressed -
13 Sobic.002G304700 RFT1, putative, expressed K06316: oligosaccharide translocation protein RFT1
14 Sobic.002G392400 expressed protein -
15 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
16 Sobic.009G186700 TraB family protein, putative, expressed -
17 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
18 Sobic.006G198400 phosphoenolpyruvate carboxykinase, putative, expressed -
19 Sobic.006G119900 zinc finger, ZZ type family protein, expressed K17987: next to BRCA1 gene 1 protein
20 Sobic.005G067966 - -


Gene co-expression network
sample Sobic005G087300 Sobic005G087300 Sobic009G040250 Sobic009G040250 Sobic005G087300--Sobic009G040250 Sobic002G313100 Sobic002G313100 Sobic005G087300--Sobic002G313100 Sobic002G066800 Sobic002G066800 Sobic005G087300--Sobic002G066800 Sobic004G198300 Sobic004G198300 Sobic005G087300--Sobic004G198300 Sobic007G086600 Sobic007G086600 Sobic005G087300--Sobic007G086600 Sobic003G393200 Sobic003G393200 Sobic005G087300--Sobic003G393200 Sobic007G105700 Sobic007G105700 Sobic005G087300--Sobic007G105700 Sobic002G322400 Sobic002G322400 Sobic005G087300--Sobic002G322400 Sobic010G160300 Sobic010G160300 Sobic005G087300--Sobic010G160300 Sobic009G040325 Sobic009G040325 Sobic009G040250--Sobic009G040325 Sobic009G040250--Sobic005G087300 Sobic003G021600 Sobic003G021600 Sobic009G040250--Sobic003G021600 Sobic006G012300 Sobic006G012300 Sobic009G040250--Sobic006G012300 Sobic002G147200 Sobic002G147200 Sobic009G040250--Sobic002G147200 Sobic009G040250--Sobic010G160300 Sobic001G043200 Sobic001G043200 Sobic009G040250--Sobic001G043200 Sobic002G304700 Sobic002G304700 Sobic009G040250--Sobic002G304700 Sobic006G191000 Sobic006G191000 Sobic009G040250--Sobic006G191000 Sobic002G392400 Sobic002G392400 Sobic002G313100--Sobic002G392400 Sobic006G232800 Sobic006G232800 Sobic002G313100--Sobic006G232800 Sobic002G313100--Sobic007G105700 Sobic003G004800 Sobic003G004800 Sobic002G313100--Sobic003G004800 Sobic002G313100--Sobic007G086600 Sobic003G293400 Sobic003G293400 Sobic002G313100--Sobic003G293400 Sobic002G313100--Sobic005G087300 Sobic001G280500 Sobic001G280500 Sobic002G313100--Sobic001G280500 Sobic001G076600 Sobic001G076600 Sobic002G313100--Sobic001G076600 Sobic001G051400 Sobic001G051400 Sobic002G066800--Sobic001G051400 Sobic002G066800--Sobic005G087300 Sobic002G078100 Sobic002G078100 Sobic002G066800--Sobic002G078100 Sobic002G066800--Sobic003G393200 Sobic010G038900 Sobic010G038900 Sobic002G066800--Sobic010G038900 Sobic010G018900 Sobic010G018900 Sobic002G066800--Sobic010G018900 Sobic003G010900 Sobic003G010900 Sobic002G066800--Sobic003G010900 Sobic006G191200 Sobic006G191200 Sobic002G066800--Sobic006G191200 Sobic003G023200 Sobic003G023200 Sobic002G066800--Sobic003G023200 Sobic004G198300--Sobic003G293400 Sobic004G026600 Sobic004G026600 Sobic004G198300--Sobic004G026600 Sobic004G198300--Sobic007G086600 Sobic010G255400 Sobic010G255400 Sobic004G198300--Sobic010G255400 Sobic005G067966 Sobic005G067966 Sobic004G198300--Sobic005G067966 Sobic002G308000 Sobic002G308000 Sobic004G198300--Sobic002G308000 Sobic004G198300--Sobic002G313100 Sobic004G198300--Sobic002G392400 Sobic004G198300--Sobic005G087300 Sobic007G086600--Sobic003G004800 Sobic001G117900 Sobic001G117900 Sobic007G086600--Sobic001G117900 Sobic005G048600 Sobic005G048600 Sobic007G086600--Sobic005G048600 Sobic007G086600--Sobic003G293400 Sobic003G022000 Sobic003G022000 Sobic007G086600--Sobic003G022000 Sobic002G348400 Sobic002G348400 Sobic007G086600--Sobic002G348400 Sobic001G433600 Sobic001G433600 Sobic007G086600--Sobic001G433600 Sobic002G193500 Sobic002G193500 Sobic007G086600--Sobic002G193500 Sobic009G201000 Sobic009G201000 Sobic007G086600--Sobic009G201000 Sobic003G190200 Sobic003G190200 Sobic003G393200--Sobic003G190200 Sobic005G123400 Sobic005G123400 Sobic003G393200--Sobic005G123400 Sobic003G393200--Sobic001G051400 Sobic006G237500 Sobic006G237500 Sobic003G393200--Sobic006G237500 Sobic003G393200--Sobic002G066800 Sobic003G393200--Sobic005G087300 Sobic003G393200--Sobic001G043200 Sobic001G343000 Sobic001G343000 Sobic003G393200--Sobic001G343000 Sobic009G059400 Sobic009G059400 Sobic003G393200--Sobic009G059400 Sobic007G105700--Sobic002G392400 Sobic007G105700--Sobic002G308000 Sobic005G060100 Sobic005G060100 Sobic007G105700--Sobic005G060100 Sobic007G105700--Sobic001G433600 Sobic001G385300 Sobic001G385300 Sobic007G105700--Sobic001G385300 Sobic001G308500 Sobic001G308500 Sobic007G105700--Sobic001G308500 Sobic004G298600 Sobic004G298600 Sobic007G105700--Sobic004G298600 Sobic008G085950 Sobic008G085950 Sobic007G105700--Sobic008G085950 Sobic007G105700--Sobic001G117900 Sobic002G274700 Sobic002G274700 Sobic002G322400--Sobic002G274700 Sobic007G153500 Sobic007G153500 Sobic002G322400--Sobic007G153500 Sobic001G455000 Sobic001G455000 Sobic002G322400--Sobic001G455000 Sobic002G322400--Sobic004G198300 Sobic006G100266 Sobic006G100266 Sobic002G322400--Sobic006G100266 Sobic008G019532 Sobic008G019532 Sobic002G322400--Sobic008G019532 Sobic002G322400--Sobic005G087300 Sobic002G322400--Sobic002G313100 Sobic002G322400--Sobic002G392400 Sobic010G160300--Sobic002G304700 Sobic010G160300--Sobic001G280500 Sobic005G063200 Sobic005G063200 Sobic010G160300--Sobic005G063200 Sobic001G114200 Sobic001G114200 Sobic010G160300--Sobic001G114200 Sobic001G501900 Sobic001G501900 Sobic010G160300--Sobic001G501900 Sobic004G350700 Sobic004G350700 Sobic010G160300--Sobic004G350700 Sobic002G007800 Sobic002G007800 Sobic010G160300--Sobic002G007800 Sobic003G117800 Sobic003G117800 Sobic010G160300--Sobic003G117800 Sobic001G149000 Sobic001G149000 Sobic010G160300--Sobic001G149000
Octagon: transcription factors


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