Gene annotation
Transcriptome id Sobic.009G059400.1
Synonym Sb09g005000
Functional annotation expressed protein
UniProt C5Z118
Pfam -
Panther DB PTHR36768 PTHR36768:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51610 : -
RAP-DB (Rice) LOC_Os05g07640.1 : expressed protein
MaizeGDB (Corn) Zm00025a042893
Brachypodium KQK07312
Barley HORVU1Hr1G024670.2 , HORVU1Hr1G024670.3 , HORVU1Hr1G024670.1 , HORVU1Hr1G024670.4 , HORVU1Hr1G024670.5
Wheat TraesCS1A02G112000 , TraesCS1B02G132300 , TraesCS1D02G113600
Populus -


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cDNA sequences
Sobic.009G059400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G017200 transporter family protein, putative, expressed K15276: SLC35B2, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
2 Sobic.005G198200 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
3 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
4 Sobic.006G144000 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.003G393200 expressed protein -
6 Sobic.009G125000 cyclin-dependent kinase C-1, putative, expressed K08819: cyclin-dependent kinase 12/13
7 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
8 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
9 Sobic.006G224300 APO, putative, expressed -
10 Sobic.001G424900 - -
11 Sobic.008G111800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
12 Sobic.001G472100 frigida, putative, expressed -
13 Sobic.007G158900 expressed protein -
14 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
15 Sobic.004G084400 methyltransferase domain containing protein, expressed K14850: ribosomal RNA-processing protein 8
16 Sobic.003G010900 expressed protein -
17 Sobic.001G305900 GTP binding protein, putative, expressed -
18 Sobic.001G017200 protein transporter, putative, expressed K12275: translocation protein SEC62
19 Sobic.002G147200 esterase/lipase/thioesterase, putative, expressed -
20 Sobic.010G077500 protein of unknown function DUF1296 domain containing protein, expressed -


Gene co-expression network
sample Sobic009G059400 Sobic009G059400 Sobic009G017200 Sobic009G017200 Sobic009G059400--Sobic009G017200 Sobic005G198200 Sobic005G198200 Sobic009G059400--Sobic005G198200 Sobic007G218600 Sobic007G218600 Sobic009G059400--Sobic007G218600 Sobic006G144000 Sobic006G144000 Sobic009G059400--Sobic006G144000 Sobic003G393200 Sobic003G393200 Sobic009G059400--Sobic003G393200 Sobic009G125000 Sobic009G125000 Sobic009G059400--Sobic009G125000 Sobic004G345400 Sobic004G345400 Sobic009G059400--Sobic004G345400 Sobic007G148400 Sobic007G148400 Sobic009G059400--Sobic007G148400 Sobic006G224300 Sobic006G224300 Sobic009G059400--Sobic006G224300 Sobic004G180900 Sobic004G180900 Sobic009G017200--Sobic004G180900 Sobic009G017200--Sobic009G059400 Sobic009G137900 Sobic009G137900 Sobic009G017200--Sobic009G137900 Sobic008G058800 Sobic008G058800 Sobic009G017200--Sobic008G058800 Sobic009G017200--Sobic006G144000 Sobic001G425000 Sobic001G425000 Sobic009G017200--Sobic001G425000 Sobic001G042200 Sobic001G042200 Sobic009G017200--Sobic001G042200 Sobic010G077500 Sobic010G077500 Sobic009G017200--Sobic010G077500 Sobic009G017200--Sobic005G198200 Sobic005G198200--Sobic009G059400 Sobic009G113100 Sobic009G113100 Sobic005G198200--Sobic009G113100 Sobic005G198200--Sobic009G137900 Sobic005G072400 Sobic005G072400 Sobic005G198200--Sobic005G072400 Sobic005G198200--Sobic009G017200 Sobic001G472100 Sobic001G472100 Sobic005G198200--Sobic001G472100 Sobic008G111800 Sobic008G111800 Sobic005G198200--Sobic008G111800 Sobic005G198200--Sobic004G180900 Sobic005G198200--Sobic010G077500 Sobic009G186700 Sobic009G186700 Sobic007G218600--Sobic009G186700 Sobic001G305900 Sobic001G305900 Sobic007G218600--Sobic001G305900 Sobic007G218600--Sobic007G148400 Sobic003G255700 Sobic003G255700 Sobic007G218600--Sobic003G255700 Sobic001G280500 Sobic001G280500 Sobic007G218600--Sobic001G280500 Sobic003G308300 Sobic003G308300 Sobic007G218600--Sobic003G308300 Sobic001G114200 Sobic001G114200 Sobic007G218600--Sobic001G114200 Sobic010G181600 Sobic010G181600 Sobic007G218600--Sobic010G181600 Sobic010G160300 Sobic010G160300 Sobic007G218600--Sobic010G160300 Sobic001G017200 Sobic001G017200 Sobic006G144000--Sobic001G017200 Sobic006G144000--Sobic009G017200 Sobic006G144000--Sobic009G059400 Sobic010G237650 Sobic010G237650 Sobic006G144000--Sobic010G237650 Sobic006G144000--Sobic004G180900 Sobic004G116600 Sobic004G116600 Sobic006G144000--Sobic004G116600 Sobic006G130200 Sobic006G130200 Sobic006G144000--Sobic006G130200 Sobic004G313300 Sobic004G313300 Sobic006G144000--Sobic004G313300 Sobic006G144000--Sobic001G425000 Sobic003G190200 Sobic003G190200 Sobic003G393200--Sobic003G190200 Sobic005G123400 Sobic005G123400 Sobic003G393200--Sobic005G123400 Sobic001G051400 Sobic001G051400 Sobic003G393200--Sobic001G051400 Sobic006G237500 Sobic006G237500 Sobic003G393200--Sobic006G237500 Sobic002G066800 Sobic002G066800 Sobic003G393200--Sobic002G066800 Sobic005G087300 Sobic005G087300 Sobic003G393200--Sobic005G087300 Sobic001G043200 Sobic001G043200 Sobic003G393200--Sobic001G043200 Sobic001G343000 Sobic001G343000 Sobic003G393200--Sobic001G343000 Sobic003G393200--Sobic009G059400 Sobic009G125000--Sobic009G059400 Sobic009G125000--Sobic004G345400 Sobic009G125000--Sobic001G472100 Sobic009G125000--Sobic004G180900 Sobic005G040900 Sobic005G040900 Sobic009G125000--Sobic005G040900 Sobic009G125000--Sobic001G042200 Sobic009G040800 Sobic009G040800 Sobic009G125000--Sobic009G040800 Sobic003G062400 Sobic003G062400 Sobic009G125000--Sobic003G062400 Sobic009G125000--Sobic005G198200 Sobic004G345400--Sobic001G042200 Sobic004G345400--Sobic010G077500 Sobic009G249700 Sobic009G249700 Sobic004G345400--Sobic009G249700 Sobic007G042900 Sobic007G042900 Sobic004G345400--Sobic007G042900 Sobic004G345400--Sobic004G180900 Sobic006G186400 Sobic006G186400 Sobic004G345400--Sobic006G186400 Sobic004G084500 Sobic004G084500 Sobic004G345400--Sobic004G084500 Sobic007G056500 Sobic007G056500 Sobic004G345400--Sobic007G056500 Sobic003G394200 Sobic003G394200 Sobic004G345400--Sobic003G394200 Sobic007G148400--Sobic007G218600 Sobic007G148400--Sobic003G308300 Sobic006G222500 Sobic006G222500 Sobic007G148400--Sobic006G222500 Sobic007G148400--Sobic009G186700 Sobic001G050500 Sobic001G050500 Sobic007G148400--Sobic001G050500 Sobic007G146600 Sobic007G146600 Sobic007G148400--Sobic007G146600 Sobic007G148400--Sobic003G255700 Sobic007G148400--Sobic001G305900 Sobic002G276800 Sobic002G276800 Sobic007G148400--Sobic002G276800 Sobic008G021000 Sobic008G021000 Sobic006G224300--Sobic008G021000 Sobic006G224300--Sobic004G084500 Sobic006G224300--Sobic009G059400 Sobic006G224300--Sobic004G345400 Sobic006G224300--Sobic003G394200 Sobic006G224300--Sobic009G040800 Sobic006G224300--Sobic009G017200 Sobic002G115500 Sobic002G115500 Sobic006G224300--Sobic002G115500 Sobic006G203300 Sobic006G203300 Sobic006G224300--Sobic006G203300
Octagon: transcription factors


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