Gene annotation
Transcriptome id Sobic.008G111800.1
Synonym Sb08g016580
Functional annotation mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
UniProt C5YP69
Pfam PF02466
Panther DB PTHR14110 PTHR14110:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55510 : Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
RAP-DB (Rice) LOC_Os12g33020.1 : mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
MaizeGDB (Corn) Zm00025a054420 , Zm00025a040617 , Zm00025a000682
Brachypodium KQJ86562
Barley HORVU5Hr1G027830.1 , HORVU5Hr1G027830.2
Wheat TraesCS5B02G106100 , TraesCS5D02G113500 , TraesCS5A02G101300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G059400 expressed protein -
2 Sobic.003G365700 expressed protein -
3 Sobic.005G198200 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
4 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
5 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
6 Sobic.009G137900 OsFBL9 - F-box domain and LRR containing protein, expressed -
7 Sobic.009G186700 TraB family protein, putative, expressed -
8 Sobic.009G017200 transporter family protein, putative, expressed K15276: SLC35B2, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
9 Sobic.001G025700 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
10 Sobic.002G267400 POLD4A - Putative DNA polymerase delta complex subunit, expressed K03505: DNA polymerase delta subunit 4
11 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
12 Sobic.003G010900 expressed protein -
13 Sobic.005G009100 OsFBX184 - F-box domain containing protein, expressed -
14 Sobic.001G017200 protein transporter, putative, expressed K12275: translocation protein SEC62
15 Sobic.004G116600 E1-BTB1 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed -
16 Sobic.001G306800 expressed protein -
17 Sobic.006G210700 potassium transporter, putative, expressed -
18 Sobic.001G472100 frigida, putative, expressed -
19 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
20 Sobic.003G308300 OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase


Gene co-expression network
sample Sobic008G111800 Sobic008G111800 Sobic009G059400 Sobic009G059400 Sobic008G111800--Sobic009G059400 Sobic003G365700 Sobic003G365700 Sobic008G111800--Sobic003G365700 Sobic005G198200 Sobic005G198200 Sobic008G111800--Sobic005G198200 Sobic007G218600 Sobic007G218600 Sobic008G111800--Sobic007G218600 Sobic007G148400 Sobic007G148400 Sobic008G111800--Sobic007G148400 Sobic009G137900 Sobic009G137900 Sobic008G111800--Sobic009G137900 Sobic009G186700 Sobic009G186700 Sobic008G111800--Sobic009G186700 Sobic009G017200 Sobic009G017200 Sobic008G111800--Sobic009G017200 Sobic001G025700 Sobic001G025700 Sobic008G111800--Sobic001G025700 Sobic009G059400--Sobic009G017200 Sobic009G059400--Sobic005G198200 Sobic009G059400--Sobic007G218600 Sobic006G144000 Sobic006G144000 Sobic009G059400--Sobic006G144000 Sobic003G393200 Sobic003G393200 Sobic009G059400--Sobic003G393200 Sobic009G125000 Sobic009G125000 Sobic009G059400--Sobic009G125000 Sobic004G345400 Sobic004G345400 Sobic009G059400--Sobic004G345400 Sobic009G059400--Sobic007G148400 Sobic006G224300 Sobic006G224300 Sobic009G059400--Sobic006G224300 Sobic003G365700--Sobic008G111800 Sobic007G056500 Sobic007G056500 Sobic003G365700--Sobic007G056500 Sobic001G287800 Sobic001G287800 Sobic003G365700--Sobic001G287800 Sobic002G165800 Sobic002G165800 Sobic003G365700--Sobic002G165800 Sobic003G121300 Sobic003G121300 Sobic003G365700--Sobic003G121300 Sobic001G042200 Sobic001G042200 Sobic003G365700--Sobic001G042200 Sobic004G192900 Sobic004G192900 Sobic003G365700--Sobic004G192900 Sobic006G121300 Sobic006G121300 Sobic003G365700--Sobic006G121300 Sobic003G365700--Sobic004G345400 Sobic005G198200--Sobic009G059400 Sobic009G113100 Sobic009G113100 Sobic005G198200--Sobic009G113100 Sobic005G198200--Sobic009G137900 Sobic005G072400 Sobic005G072400 Sobic005G198200--Sobic005G072400 Sobic005G198200--Sobic009G017200 Sobic001G472100 Sobic001G472100 Sobic005G198200--Sobic001G472100 Sobic005G198200--Sobic008G111800 Sobic004G180900 Sobic004G180900 Sobic005G198200--Sobic004G180900 Sobic010G077500 Sobic010G077500 Sobic005G198200--Sobic010G077500 Sobic007G218600--Sobic009G186700 Sobic001G305900 Sobic001G305900 Sobic007G218600--Sobic001G305900 Sobic007G218600--Sobic007G148400 Sobic003G255700 Sobic003G255700 Sobic007G218600--Sobic003G255700 Sobic001G280500 Sobic001G280500 Sobic007G218600--Sobic001G280500 Sobic003G308300 Sobic003G308300 Sobic007G218600--Sobic003G308300 Sobic001G114200 Sobic001G114200 Sobic007G218600--Sobic001G114200 Sobic010G181600 Sobic010G181600 Sobic007G218600--Sobic010G181600 Sobic010G160300 Sobic010G160300 Sobic007G218600--Sobic010G160300 Sobic007G148400--Sobic007G218600 Sobic007G148400--Sobic003G308300 Sobic006G222500 Sobic006G222500 Sobic007G148400--Sobic006G222500 Sobic007G148400--Sobic009G186700 Sobic001G050500 Sobic001G050500 Sobic007G148400--Sobic001G050500 Sobic007G146600 Sobic007G146600 Sobic007G148400--Sobic007G146600 Sobic007G148400--Sobic003G255700 Sobic007G148400--Sobic001G305900 Sobic002G276800 Sobic002G276800 Sobic007G148400--Sobic002G276800 Sobic009G137900--Sobic009G017200 Sobic009G137900--Sobic005G198200 Sobic003G051700 Sobic003G051700 Sobic009G137900--Sobic003G051700 Sobic006G278200 Sobic006G278200 Sobic009G137900--Sobic006G278200 Sobic009G137900--Sobic004G180900 Sobic009G137900--Sobic008G111800 Sobic001G426900 Sobic001G426900 Sobic009G137900--Sobic001G426900 Sobic009G137900--Sobic005G072400 Sobic003G343600 Sobic003G343600 Sobic009G137900--Sobic003G343600 Sobic009G186700--Sobic007G218600 Sobic009G186700--Sobic003G255700 Sobic009G186700--Sobic001G305900 Sobic009G186700--Sobic003G308300 Sobic009G186700--Sobic001G050500 Sobic009G186700--Sobic001G114200 Sobic009G186700--Sobic001G280500 Sobic008G013200 Sobic008G013200 Sobic009G186700--Sobic008G013200 Sobic009G186700--Sobic007G148400 Sobic009G017200--Sobic004G180900 Sobic009G017200--Sobic009G059400 Sobic009G017200--Sobic009G137900 Sobic008G058800 Sobic008G058800 Sobic009G017200--Sobic008G058800 Sobic009G017200--Sobic006G144000 Sobic001G425000 Sobic001G425000 Sobic009G017200--Sobic001G425000 Sobic009G017200--Sobic001G042200 Sobic009G017200--Sobic010G077500 Sobic009G017200--Sobic005G198200 Sobic001G025700--Sobic003G308300 Sobic001G025700--Sobic008G013200 Sobic001G025700--Sobic003G255700 Sobic007G153500 Sobic007G153500 Sobic001G025700--Sobic007G153500 Sobic004G328100 Sobic004G328100 Sobic001G025700--Sobic004G328100 Sobic002G348400 Sobic002G348400 Sobic001G025700--Sobic002G348400 Sobic001G025700--Sobic009G186700 Sobic010G069500 Sobic010G069500 Sobic001G025700--Sobic010G069500 Sobic001G025700--Sobic007G148400
Octagon: transcription factors


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