Gene annotation
Transcriptome id Sobic.004G116600.1
Synonym POB1, Sb04g009720, ATPOB1
Functional annotation E1-BTB1 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed
UniProt C5XZI0
Pfam PF07707 PF00651
Panther DB PTHR24412 PTHR24412:SF194
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G61600 : POZ/BTB containin G-protein 1
RAP-DB (Rice) LOC_Os02g16000.1 : E1-BTB1 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed
MaizeGDB (Corn) Zm00025a019889 , Zm00025a034385 , Zm00025a042378
Brachypodium KQK12311 , KQK12314 , PNT75862 , KQK18219 , KQK18218 , PNT73848 , KQJ94306
Barley HORVU7Hr1G080790.9 , HORVU7Hr1G080790.5 , HORVU7Hr1G080790.4 , HORVU7Hr1G080790.7 , HORVU7Hr1G080790.6 , HORVU7Hr1G080790.1 , HORVU7Hr1G080790.3 , HORVU7Hr1G080790.2 , HORVU7Hr1G080790.11 , HORVU7Hr1G080790.10 , HORVU5Hr1G088580.3 , HORVU5Hr1G088580.4 , HORVU7Hr1G080770.3 , HORVU7Hr1G080770.2 , HORVU7Hr1G080770.1 , HORVU7Hr1G080770.7 , HORVU7Hr1G080770.6 , HORVU7Hr1G080770.5 , HORVU7Hr1G080770.4 , HORVU7Hr1G080770.8
Wheat TraesCS7B02G239200 , TraesCS7B02G239200 , TraesCS7B02G239200 , TraesCS7B02G239200 , TraesCS7B02G239200 , TraesCS7B02G239200 , TraesCS7B02G239100 , TraesCS5B02G361200 , TraesCS7D02G335600 , TraesCS5A02G359100 , TraesCS5D02G368300 , TraesCS7D02G335700 , TraesCS7D02G335700 , TraesCS7D02G335700 , TraesCS7A02G343900 , TraesCS7A02G343900 , TraesCS7A02G343900 , TraesCS5A02G359300 , TraesCS7A02G344000 , TraesCS7A02G344000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G202266 - -
2 Sobic.001G287800 GTPase-activating protein, putative, expressed K12493: ADP-ribosylation factor GTPase-activating protein 2/3
3 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
4 Sobic.006G130200 expressed protein -
5 Sobic.005G049000 transcription elongation factor protein, putative, expressed -
6 Sobic.006G144000 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.004G218300 Zinc finger, ZZ type domain containing protein, expressed -
8 Sobic.001G017200 protein transporter, putative, expressed K12275: translocation protein SEC62
9 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
10 Sobic.009G017200 transporter family protein, putative, expressed K15276: SLC35B2, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
11 Sobic.001G425000 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
12 Sobic.007G177500 thaumatin, putative, expressed -
13 Sobic.006G203600 EF hand family protein, putative, expressed -
14 Sobic.009G059400 expressed protein -
15 Sobic.008G111800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
16 Sobic.003G381600 ATP-dependent Clp protease ATP-binding subunit clpX, putative, expressed K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
17 Sobic.004G259300 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K15687: E3 ubiquitin-protein ligase makorin
18 Sobic.008G073000 expressed protein -
19 Sobic.003G073000 IWS1 C-terminus family protein, putative, expressed K17498: SPN1, transcription factor SPN1
20 Sobic.004G041500 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L


Gene co-expression network
sample Sobic004G116600 Sobic004G116600 Sobic001G202266 Sobic001G202266 Sobic004G116600--Sobic001G202266 Sobic001G287800 Sobic001G287800 Sobic004G116600--Sobic001G287800 Sobic004G180900 Sobic004G180900 Sobic004G116600--Sobic004G180900 Sobic006G130200 Sobic006G130200 Sobic004G116600--Sobic006G130200 Sobic005G049000 Sobic005G049000 Sobic004G116600--Sobic005G049000 Sobic006G144000 Sobic006G144000 Sobic004G116600--Sobic006G144000 Sobic004G218300 Sobic004G218300 Sobic004G116600--Sobic004G218300 Sobic001G017200 Sobic001G017200 Sobic004G116600--Sobic001G017200 Sobic007G192400 Sobic007G192400 Sobic004G116600--Sobic007G192400 Sobic008G073000 Sobic008G073000 Sobic001G202266--Sobic008G073000 Sobic001G425000 Sobic001G425000 Sobic001G202266--Sobic001G425000 Sobic002G001600 Sobic002G001600 Sobic001G202266--Sobic002G001600 Sobic001G202266--Sobic004G116600 Sobic005G030300 Sobic005G030300 Sobic001G202266--Sobic005G030300 Sobic006G278200 Sobic006G278200 Sobic001G202266--Sobic006G278200 Sobic003G073000 Sobic003G073000 Sobic001G202266--Sobic003G073000 Sobic001G202266--Sobic006G130200 Sobic002G061400 Sobic002G061400 Sobic001G202266--Sobic002G061400 Sobic004G041500 Sobic004G041500 Sobic001G287800--Sobic004G041500 Sobic001G287800--Sobic003G073000 Sobic001G287800--Sobic004G116600 Sobic006G186400 Sobic006G186400 Sobic001G287800--Sobic006G186400 Sobic001G287800--Sobic001G425000 Sobic007G056500 Sobic007G056500 Sobic001G287800--Sobic007G056500 Sobic004G094300 Sobic004G094300 Sobic001G287800--Sobic004G094300 Sobic001G287800--Sobic004G180900 Sobic010G243400 Sobic010G243400 Sobic001G287800--Sobic010G243400 Sobic009G017200 Sobic009G017200 Sobic004G180900--Sobic009G017200 Sobic004G180900--Sobic007G056500 Sobic004G180900--Sobic001G425000 Sobic004G345400 Sobic004G345400 Sobic004G180900--Sobic004G345400 Sobic004G180900--Sobic006G186400 Sobic008G058800 Sobic008G058800 Sobic004G180900--Sobic008G058800 Sobic007G026000 Sobic007G026000 Sobic004G180900--Sobic007G026000 Sobic010G077500 Sobic010G077500 Sobic004G180900--Sobic010G077500 Sobic003G381600 Sobic003G381600 Sobic004G180900--Sobic003G381600 Sobic006G128800 Sobic006G128800 Sobic006G130200--Sobic006G128800 Sobic006G130200--Sobic004G218300 Sobic010G174800 Sobic010G174800 Sobic006G130200--Sobic010G174800 Sobic009G032300 Sobic009G032300 Sobic006G130200--Sobic009G032300 Sobic003G398400 Sobic003G398400 Sobic006G130200--Sobic003G398400 Sobic006G130200--Sobic001G425000 Sobic006G092800 Sobic006G092800 Sobic006G130200--Sobic006G092800 Sobic003G336800 Sobic003G336800 Sobic006G130200--Sobic003G336800 Sobic001G235000 Sobic001G235000 Sobic006G130200--Sobic001G235000 Sobic005G049000--Sobic004G116600 Sobic005G049000--Sobic007G192400 Sobic008G108500 Sobic008G108500 Sobic005G049000--Sobic008G108500 Sobic010G069500 Sobic010G069500 Sobic005G049000--Sobic010G069500 Sobic008G006000 Sobic008G006000 Sobic005G049000--Sobic008G006000 Sobic007G177500 Sobic007G177500 Sobic005G049000--Sobic007G177500 Sobic005G170000 Sobic005G170000 Sobic005G049000--Sobic005G170000 Sobic006G203600 Sobic006G203600 Sobic005G049000--Sobic006G203600 Sobic005G049000--Sobic006G144000 Sobic006G144000--Sobic001G017200 Sobic006G144000--Sobic009G017200 Sobic009G059400 Sobic009G059400 Sobic006G144000--Sobic009G059400 Sobic010G237650 Sobic010G237650 Sobic006G144000--Sobic010G237650 Sobic006G144000--Sobic004G180900 Sobic006G144000--Sobic004G116600 Sobic006G144000--Sobic006G130200 Sobic004G313300 Sobic004G313300 Sobic006G144000--Sobic004G313300 Sobic006G144000--Sobic001G425000 Sobic004G218300--Sobic003G398400 Sobic004G218300--Sobic006G130200 Sobic004G259300 Sobic004G259300 Sobic004G218300--Sobic004G259300 Sobic009G228400 Sobic009G228400 Sobic004G218300--Sobic009G228400 Sobic006G215100 Sobic006G215100 Sobic004G218300--Sobic006G215100 Sobic003G407100 Sobic003G407100 Sobic004G218300--Sobic003G407100 Sobic004G218300--Sobic007G192400 Sobic002G147100 Sobic002G147100 Sobic004G218300--Sobic002G147100 Sobic002G317400 Sobic002G317400 Sobic004G218300--Sobic002G317400 Sobic001G017200--Sobic006G144000 Sobic001G017200--Sobic004G180900 Sobic001G017200--Sobic009G017200 Sobic007G158900 Sobic007G158900 Sobic001G017200--Sobic007G158900 Sobic004G042900 Sobic004G042900 Sobic001G017200--Sobic004G042900 Sobic001G017200--Sobic009G059400 Sobic001G017200--Sobic007G192400 Sobic001G017200--Sobic004G116600 Sobic007G218600 Sobic007G218600 Sobic001G017200--Sobic007G218600 Sobic003G353700 Sobic003G353700 Sobic007G192400--Sobic003G353700 Sobic007G192400--Sobic008G006000 Sobic007G077532 Sobic007G077532 Sobic007G192400--Sobic007G077532 Sobic010G181600 Sobic010G181600 Sobic007G192400--Sobic010G181600 Sobic009G252300 Sobic009G252300 Sobic007G192400--Sobic009G252300 Sobic007G192400--Sobic004G259300 Sobic002G203600 Sobic002G203600 Sobic007G192400--Sobic002G203600 Sobic008G036600 Sobic008G036600 Sobic007G192400--Sobic008G036600 Sobic004G141400 Sobic004G141400 Sobic007G192400--Sobic004G141400
Octagon: transcription factors


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