Gene annotation
Transcriptome id Sobic.007G177500.1
Synonym Sb07g024920
Functional annotation thaumatin, putative, expressed
UniProt C5YH35
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38660 : Pathogenesis-related thaumatin superfamily protein
RAP-DB (Rice) LOC_Os08g43510.1 : thaumatin, putative, expressed
MaizeGDB (Corn) Zm00025a005688 , Zm00025a012308 , Zm00025a049345 , Zm00025a034213
Brachypodium KQJ81409
Barley HORVU7Hr1G057350.4 , HORVU7Hr1G057350.1 , HORVU7Hr1G057350.3 , HORVU7Hr1G057350.2 , HORVU5Hr1G112160.8 , HORVU5Hr1G112160.4 , HORVU5Hr1G112160.5 , HORVU5Hr1G112160.6 , HORVU5Hr1G112160.7 , HORVU5Hr1G112160.1 , HORVU5Hr1G112160.2 , HORVU5Hr1G112160.3 , HORVU5Hr1G083260.2 , HORVU5Hr1G083260.3 , HORVU5Hr1G083260.1 , HORVU5Hr1G083240.4 , HORVU5Hr1G083240.1 , HORVU5Hr1G083240.2 , HORVU5Hr1G083240.3
Wheat TraesCS7D02G272100 , TraesCS5A02G472800 , TraesCS7B02G170200 , TraesCS5D02G485500 , TraesCS7A02G271800 , TraesCS5B02G328500 , TraesCS5B02G485700 , TraesCS5A02G328500 , TraesCS5D02G334400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G259300 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K15687: E3 ubiquitin-protein ligase makorin
2 Sobic.004G016100 expressed protein -
3 Sobic.004G116600 E1-BTB1 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed -
4 Sobic.003G005100 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
5 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
6 Sobic.004G218300 Zinc finger, ZZ type domain containing protein, expressed -
7 Sobic.007G077532 - K08597: SENP8, NEDP1, sentrin-specific protease 8
8 Sobic.001G281700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
9 Sobic.006G130200 expressed protein -
10 Sobic.006G252400 S4 domain containing protein, putative, expressed K14560: U3 small nucleolar ribonucleoprotein protein IMP3
11 Sobic.005G049000 transcription elongation factor protein, putative, expressed -
12 Sobic.004G141400 START domain containing protein, putative, expressed -
13 Sobic.008G006000 expressed protein -
14 Sobic.003G353700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
15 Sobic.007G158900 expressed protein -
16 Sobic.003G158400 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
17 Sobic.010G181600 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
18 Sobic.002G203600 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
19 Sobic.009G228400 lipase-related, putative, expressed -
20 Sobic.005G170000 expressed protein -


Gene co-expression network
sample Sobic007G177500 Sobic007G177500 Sobic004G259300 Sobic004G259300 Sobic007G177500--Sobic004G259300 Sobic004G016100 Sobic004G016100 Sobic007G177500--Sobic004G016100 Sobic004G116600 Sobic004G116600 Sobic007G177500--Sobic004G116600 Sobic003G005100 Sobic003G005100 Sobic007G177500--Sobic003G005100 Sobic007G192400 Sobic007G192400 Sobic007G177500--Sobic007G192400 Sobic004G218300 Sobic004G218300 Sobic007G177500--Sobic004G218300 Sobic007G077532 Sobic007G077532 Sobic007G177500--Sobic007G077532 Sobic001G281700 Sobic001G281700 Sobic007G177500--Sobic001G281700 Sobic006G130200 Sobic006G130200 Sobic007G177500--Sobic006G130200 Sobic004G259300--Sobic004G218300 Sobic004G141400 Sobic004G141400 Sobic004G259300--Sobic004G141400 Sobic004G259300--Sobic007G192400 Sobic003G250400 Sobic003G250400 Sobic004G259300--Sobic003G250400 Sobic007G184800 Sobic007G184800 Sobic004G259300--Sobic007G184800 Sobic004G259300--Sobic003G005100 Sobic004G259300--Sobic007G077532 Sobic004G259300--Sobic007G177500 Sobic008G006000 Sobic008G006000 Sobic004G259300--Sobic008G006000 Sobic004G016100--Sobic007G077532 Sobic004G016100--Sobic004G259300 Sobic004G016100--Sobic007G177500 Sobic004G016100--Sobic004G141400 Sobic005G170000 Sobic005G170000 Sobic004G016100--Sobic005G170000 Sobic004G016100--Sobic007G192400 Sobic003G402900 Sobic003G402900 Sobic004G016100--Sobic003G402900 Sobic009G228400 Sobic009G228400 Sobic004G016100--Sobic009G228400 Sobic004G016100--Sobic004G218300 Sobic001G202266 Sobic001G202266 Sobic004G116600--Sobic001G202266 Sobic001G287800 Sobic001G287800 Sobic004G116600--Sobic001G287800 Sobic004G180900 Sobic004G180900 Sobic004G116600--Sobic004G180900 Sobic004G116600--Sobic006G130200 Sobic005G049000 Sobic005G049000 Sobic004G116600--Sobic005G049000 Sobic006G144000 Sobic006G144000 Sobic004G116600--Sobic006G144000 Sobic004G116600--Sobic004G218300 Sobic001G017200 Sobic001G017200 Sobic004G116600--Sobic001G017200 Sobic004G116600--Sobic007G192400 Sobic002G113200 Sobic002G113200 Sobic003G005100--Sobic002G113200 Sobic003G212000 Sobic003G212000 Sobic003G005100--Sobic003G212000 Sobic006G252400 Sobic006G252400 Sobic003G005100--Sobic006G252400 Sobic003G284100 Sobic003G284100 Sobic003G005100--Sobic003G284100 Sobic010G161000 Sobic010G161000 Sobic003G005100--Sobic010G161000 Sobic003G234500 Sobic003G234500 Sobic003G005100--Sobic003G234500 Sobic003G353700 Sobic003G353700 Sobic003G005100--Sobic003G353700 Sobic007G219500 Sobic007G219500 Sobic003G005100--Sobic007G219500 Sobic003G005100--Sobic004G259300 Sobic007G192400--Sobic003G353700 Sobic007G192400--Sobic008G006000 Sobic007G192400--Sobic007G077532 Sobic010G181600 Sobic010G181600 Sobic007G192400--Sobic010G181600 Sobic009G252300 Sobic009G252300 Sobic007G192400--Sobic009G252300 Sobic007G192400--Sobic004G259300 Sobic002G203600 Sobic002G203600 Sobic007G192400--Sobic002G203600 Sobic008G036600 Sobic008G036600 Sobic007G192400--Sobic008G036600 Sobic007G192400--Sobic004G141400 Sobic003G398400 Sobic003G398400 Sobic004G218300--Sobic003G398400 Sobic004G218300--Sobic006G130200 Sobic004G218300--Sobic004G259300 Sobic004G218300--Sobic009G228400 Sobic006G215100 Sobic006G215100 Sobic004G218300--Sobic006G215100 Sobic003G407100 Sobic003G407100 Sobic004G218300--Sobic003G407100 Sobic004G218300--Sobic007G192400 Sobic002G147100 Sobic002G147100 Sobic004G218300--Sobic002G147100 Sobic002G317400 Sobic002G317400 Sobic004G218300--Sobic002G317400 Sobic007G077532--Sobic004G141400 Sobic001G057400 Sobic001G057400 Sobic007G077532--Sobic001G057400 Sobic007G077532--Sobic007G192400 Sobic004G004100 Sobic004G004100 Sobic007G077532--Sobic004G004100 Sobic005G185500 Sobic005G185500 Sobic007G077532--Sobic005G185500 Sobic007G077532--Sobic010G181600 Sobic007G077532--Sobic003G353700 Sobic007G077532--Sobic008G006000 Sobic003G117800 Sobic003G117800 Sobic007G077532--Sobic003G117800 Sobic001G206000 Sobic001G206000 Sobic001G281700--Sobic001G206000 Sobic002G088700 Sobic002G088700 Sobic001G281700--Sobic002G088700 Sobic001G149700 Sobic001G149700 Sobic001G281700--Sobic001G149700 Sobic007G115900 Sobic007G115900 Sobic001G281700--Sobic007G115900 Sobic010G071200 Sobic010G071200 Sobic001G281700--Sobic010G071200 Sobic010G055500 Sobic010G055500 Sobic001G281700--Sobic010G055500 Sobic006G257900 Sobic006G257900 Sobic001G281700--Sobic006G257900 Sobic009G032300 Sobic009G032300 Sobic001G281700--Sobic009G032300 Sobic006G254600 Sobic006G254600 Sobic001G281700--Sobic006G254600 Sobic006G128800 Sobic006G128800 Sobic006G130200--Sobic006G128800 Sobic006G130200--Sobic004G218300 Sobic010G174800 Sobic010G174800 Sobic006G130200--Sobic010G174800 Sobic006G130200--Sobic009G032300 Sobic006G130200--Sobic003G398400 Sobic001G425000 Sobic001G425000 Sobic006G130200--Sobic001G425000 Sobic006G092800 Sobic006G092800 Sobic006G130200--Sobic006G092800 Sobic003G336800 Sobic003G336800 Sobic006G130200--Sobic003G336800 Sobic001G235000 Sobic001G235000 Sobic006G130200--Sobic001G235000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.