Gene annotation
Transcriptome id Sobic.005G170000.1
Synonym Sb05g023020
Functional annotation expressed protein
UniProt C5Y5E2
Pfam PF00085
Panther DB PTHR10438 PTHR10438:SF241
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0006662glycerol ether metabolic process


Orthologs (automatic annotation)
TAIR AT5G06430 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os11g38040.1 : expressed protein
MaizeGDB (Corn) Zm00025a029476 , Zm00025a029488
Brachypodium PNT63372
Barley HORVU0Hr1G008360.2 , HORVU0Hr1G008360.1
Wheat TraesCS4B02G160300
Populus -


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cDNA sequences
Sobic.005G170000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G077532 - K08597: SENP8, NEDP1, sentrin-specific protease 8
2 Sobic.008G006000 expressed protein -
3 Sobic.010G225201 - -
4 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
5 Sobic.005G123400 expressed protein -
6 Sobic.002G203600 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
7 Sobic.004G016100 expressed protein -
8 Sobic.010G255900 DNL zinc finger domain containing protein, putative, expressed K17808: ZIM17, DNLZ, mitochondrial protein import protein ZIM17
9 Sobic.004G141400 START domain containing protein, putative, expressed -
10 Sobic.001G057400 expressed protein -
11 Sobic.004G185500 extracellular ligand-gated ion channel, putative, expressed -
12 Sobic.004G068100 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
13 Sobic.005G207400 - -
14 Sobic.010G112600 integral membrane protein, putative, expressed -
15 Sobic.005G185500 - -
16 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
17 Sobic.004G111600 - -
18 Sobic.005G049000 transcription elongation factor protein, putative, expressed -
19 Sobic.003G353700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
20 Sobic.004G334200 ribosomal protein S15 containing protein, expressed -


Gene co-expression network
sample Sobic005G170000 Sobic005G170000 Sobic007G077532 Sobic007G077532 Sobic005G170000--Sobic007G077532 Sobic008G006000 Sobic008G006000 Sobic005G170000--Sobic008G006000 Sobic010G225201 Sobic010G225201 Sobic005G170000--Sobic010G225201 Sobic007G192400 Sobic007G192400 Sobic005G170000--Sobic007G192400 Sobic005G123400 Sobic005G123400 Sobic005G170000--Sobic005G123400 Sobic002G203600 Sobic002G203600 Sobic005G170000--Sobic002G203600 Sobic004G016100 Sobic004G016100 Sobic005G170000--Sobic004G016100 Sobic010G255900 Sobic010G255900 Sobic005G170000--Sobic010G255900 Sobic004G141400 Sobic004G141400 Sobic005G170000--Sobic004G141400 Sobic007G077532--Sobic004G141400 Sobic001G057400 Sobic001G057400 Sobic007G077532--Sobic001G057400 Sobic007G077532--Sobic007G192400 Sobic004G004100 Sobic004G004100 Sobic007G077532--Sobic004G004100 Sobic005G185500 Sobic005G185500 Sobic007G077532--Sobic005G185500 Sobic010G181600 Sobic010G181600 Sobic007G077532--Sobic010G181600 Sobic003G353700 Sobic003G353700 Sobic007G077532--Sobic003G353700 Sobic007G077532--Sobic008G006000 Sobic003G117800 Sobic003G117800 Sobic007G077532--Sobic003G117800 Sobic008G006000--Sobic010G181600 Sobic008G006000--Sobic007G192400 Sobic008G006000--Sobic003G353700 Sobic008G006000--Sobic004G141400 Sobic008G006000--Sobic007G077532 Sobic008G006000--Sobic010G255900 Sobic008G006000--Sobic005G185500 Sobic008G006000--Sobic003G117800 Sobic001G280500 Sobic001G280500 Sobic008G006000--Sobic001G280500 Sobic002G034750 Sobic002G034750 Sobic010G225201--Sobic002G034750 Sobic010G039000 Sobic010G039000 Sobic010G225201--Sobic010G039000 Sobic001G504500 Sobic001G504500 Sobic010G225201--Sobic001G504500 Sobic010G225201--Sobic008G006000 Sobic010G225201--Sobic010G255900 Sobic002G397900 Sobic002G397900 Sobic010G225201--Sobic002G397900 Sobic004G100100 Sobic004G100100 Sobic010G225201--Sobic004G100100 Sobic010G225201--Sobic005G170000 Sobic007G219500 Sobic007G219500 Sobic010G225201--Sobic007G219500 Sobic007G192400--Sobic003G353700 Sobic007G192400--Sobic008G006000 Sobic007G192400--Sobic007G077532 Sobic007G192400--Sobic010G181600 Sobic009G252300 Sobic009G252300 Sobic007G192400--Sobic009G252300 Sobic004G259300 Sobic004G259300 Sobic007G192400--Sobic004G259300 Sobic007G192400--Sobic002G203600 Sobic008G036600 Sobic008G036600 Sobic007G192400--Sobic008G036600 Sobic007G192400--Sobic004G141400 Sobic006G237500 Sobic006G237500 Sobic005G123400--Sobic006G237500 Sobic010G112600 Sobic010G112600 Sobic005G123400--Sobic010G112600 Sobic003G393200 Sobic003G393200 Sobic005G123400--Sobic003G393200 Sobic001G043200 Sobic001G043200 Sobic005G123400--Sobic001G043200 Sobic009G227100 Sobic009G227100 Sobic005G123400--Sobic009G227100 Sobic005G123400--Sobic009G252300 Sobic007G030100 Sobic007G030100 Sobic005G123400--Sobic007G030100 Sobic003G190200 Sobic003G190200 Sobic005G123400--Sobic003G190200 Sobic003G368400 Sobic003G368400 Sobic005G123400--Sobic003G368400 Sobic002G203600--Sobic005G123400 Sobic002G203600--Sobic007G192400 Sobic003G091600 Sobic003G091600 Sobic002G203600--Sobic003G091600 Sobic002G203600--Sobic004G259300 Sobic002G203600--Sobic003G353700 Sobic002G203600--Sobic009G227100 Sobic010G237650 Sobic010G237650 Sobic002G203600--Sobic010G237650 Sobic007G184800 Sobic007G184800 Sobic002G203600--Sobic007G184800 Sobic001G521700 Sobic001G521700 Sobic002G203600--Sobic001G521700 Sobic004G016100--Sobic007G077532 Sobic004G016100--Sobic004G259300 Sobic007G177500 Sobic007G177500 Sobic004G016100--Sobic007G177500 Sobic004G016100--Sobic004G141400 Sobic004G016100--Sobic005G170000 Sobic004G016100--Sobic007G192400 Sobic003G402900 Sobic003G402900 Sobic004G016100--Sobic003G402900 Sobic009G228400 Sobic009G228400 Sobic004G016100--Sobic009G228400 Sobic004G218300 Sobic004G218300 Sobic004G016100--Sobic004G218300 Sobic010G255900--Sobic005G185500 Sobic006G162400 Sobic006G162400 Sobic010G255900--Sobic006G162400 Sobic001G356200 Sobic001G356200 Sobic010G255900--Sobic001G356200 Sobic003G385300 Sobic003G385300 Sobic010G255900--Sobic003G385300 Sobic010G255900--Sobic001G504500 Sobic001G149000 Sobic001G149000 Sobic010G255900--Sobic001G149000 Sobic010G255900--Sobic003G117800 Sobic010G255900--Sobic003G353700 Sobic003G428000 Sobic003G428000 Sobic010G255900--Sobic003G428000 Sobic004G141400--Sobic007G077532 Sobic004G141400--Sobic008G006000 Sobic004G141400--Sobic010G181600 Sobic004G141400--Sobic004G259300 Sobic004G141400--Sobic007G192400 Sobic004G141400--Sobic001G356200 Sobic004G141400--Sobic004G004100 Sobic004G141400--Sobic003G117800 Sobic004G141400--Sobic003G353700
Octagon: transcription factors


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