Gene annotation
Transcriptome id Sobic.004G141400.1
Synonym Sb04g017500
Functional annotation START domain containing protein, putative, expressed
UniProt C5Y150
Pfam PF01852
Panther DB PTHR19308 PTHR19308:SF13
NCBI CDD KOG2761; START domain-containing proteins involved in steroidogenesis/phosphatidylcholine transfer
KEGG Orthology -
Gene Ontology GO:0008289; lipid binding


Orthologs (automatic annotation)
TAIR AT3G13062 : Polyketide cyclase/dehydrase and lipid transport superfamily protein
RAP-DB (Rice) LOC_Os02g26860.1 : START domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a020304 , Zm00025a011258
Brachypodium -
Barley -
Wheat TraesCS1B02G381600 , TraesCS1D02G369600 , TraesCS1D02G369600
Populus -


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cDNA sequences
Sobic.004G141400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G077532 - K08597: SENP8, NEDP1, sentrin-specific protease 8
2 Sobic.008G006000 expressed protein -
3 Sobic.010G181600 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
4 Sobic.004G259300 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K15687: E3 ubiquitin-protein ligase makorin
5 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
6 Sobic.001G356200 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
7 Sobic.004G004100 nucleic acid binding protein, putative, expressed -
8 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
9 Sobic.003G353700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
10 Sobic.003G005100 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
11 Sobic.003G190600 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
12 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
13 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
14 Sobic.001G057400 expressed protein -
15 Sobic.003G167000 protein phosphotase protein, putative, expressed -
16 Sobic.001G385000 nucleoside-triphosphatase, putative, expressed K14641: apyrase
17 Sobic.003G250400 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.003G058500 expressed protein -
19 Sobic.001G504500 expressed protein -
20 Sobic.003G405600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic004G141400 Sobic004G141400 Sobic007G077532 Sobic007G077532 Sobic004G141400--Sobic007G077532 Sobic008G006000 Sobic008G006000 Sobic004G141400--Sobic008G006000 Sobic010G181600 Sobic010G181600 Sobic004G141400--Sobic010G181600 Sobic004G259300 Sobic004G259300 Sobic004G141400--Sobic004G259300 Sobic007G192400 Sobic007G192400 Sobic004G141400--Sobic007G192400 Sobic001G356200 Sobic001G356200 Sobic004G141400--Sobic001G356200 Sobic004G004100 Sobic004G004100 Sobic004G141400--Sobic004G004100 Sobic003G117800 Sobic003G117800 Sobic004G141400--Sobic003G117800 Sobic003G353700 Sobic003G353700 Sobic004G141400--Sobic003G353700 Sobic007G077532--Sobic004G141400 Sobic001G057400 Sobic001G057400 Sobic007G077532--Sobic001G057400 Sobic007G077532--Sobic007G192400 Sobic007G077532--Sobic004G004100 Sobic005G185500 Sobic005G185500 Sobic007G077532--Sobic005G185500 Sobic007G077532--Sobic010G181600 Sobic007G077532--Sobic003G353700 Sobic007G077532--Sobic008G006000 Sobic007G077532--Sobic003G117800 Sobic008G006000--Sobic010G181600 Sobic008G006000--Sobic007G192400 Sobic008G006000--Sobic003G353700 Sobic008G006000--Sobic004G141400 Sobic008G006000--Sobic007G077532 Sobic010G255900 Sobic010G255900 Sobic008G006000--Sobic010G255900 Sobic008G006000--Sobic005G185500 Sobic008G006000--Sobic003G117800 Sobic001G280500 Sobic001G280500 Sobic008G006000--Sobic001G280500 Sobic003G058500 Sobic003G058500 Sobic010G181600--Sobic003G058500 Sobic001G424800 Sobic001G424800 Sobic010G181600--Sobic001G424800 Sobic010G181600--Sobic003G117800 Sobic001G475300 Sobic001G475300 Sobic010G181600--Sobic001G475300 Sobic010G181600--Sobic008G006000 Sobic010G181600--Sobic003G353700 Sobic007G218600 Sobic007G218600 Sobic010G181600--Sobic007G218600 Sobic010G181600--Sobic004G004100 Sobic003G250400 Sobic003G250400 Sobic010G181600--Sobic003G250400 Sobic004G218300 Sobic004G218300 Sobic004G259300--Sobic004G218300 Sobic004G259300--Sobic004G141400 Sobic004G259300--Sobic007G192400 Sobic004G259300--Sobic003G250400 Sobic007G184800 Sobic007G184800 Sobic004G259300--Sobic007G184800 Sobic003G005100 Sobic003G005100 Sobic004G259300--Sobic003G005100 Sobic004G259300--Sobic007G077532 Sobic007G177500 Sobic007G177500 Sobic004G259300--Sobic007G177500 Sobic004G259300--Sobic008G006000 Sobic007G192400--Sobic003G353700 Sobic007G192400--Sobic008G006000 Sobic007G192400--Sobic007G077532 Sobic007G192400--Sobic010G181600 Sobic009G252300 Sobic009G252300 Sobic007G192400--Sobic009G252300 Sobic007G192400--Sobic004G259300 Sobic002G203600 Sobic002G203600 Sobic007G192400--Sobic002G203600 Sobic008G036600 Sobic008G036600 Sobic007G192400--Sobic008G036600 Sobic007G192400--Sobic004G141400 Sobic004G113600 Sobic004G113600 Sobic001G356200--Sobic004G113600 Sobic001G400000 Sobic001G400000 Sobic001G356200--Sobic001G400000 Sobic003G385300 Sobic003G385300 Sobic001G356200--Sobic003G385300 Sobic007G039200 Sobic007G039200 Sobic001G356200--Sobic007G039200 Sobic001G356200--Sobic001G424800 Sobic004G107100 Sobic004G107100 Sobic001G356200--Sobic004G107100 Sobic003G089100 Sobic003G089100 Sobic001G356200--Sobic003G089100 Sobic001G356200--Sobic003G117800 Sobic006G134500 Sobic006G134500 Sobic001G356200--Sobic006G134500 Sobic004G004100--Sobic010G181600 Sobic004G004100--Sobic007G077532 Sobic004G004100--Sobic001G356200 Sobic008G152700 Sobic008G152700 Sobic004G004100--Sobic008G152700 Sobic003G428000 Sobic003G428000 Sobic004G004100--Sobic003G428000 Sobic009G046900 Sobic009G046900 Sobic004G004100--Sobic009G046900 Sobic004G004100--Sobic003G058500 Sobic004G004100--Sobic003G117800 Sobic001G149000 Sobic001G149000 Sobic004G004100--Sobic001G149000 Sobic003G117800--Sobic001G424800 Sobic003G117800--Sobic003G385300 Sobic003G394500 Sobic003G394500 Sobic003G117800--Sobic003G394500 Sobic003G117800--Sobic001G057400 Sobic003G117800--Sobic008G152700 Sobic003G117800--Sobic001G149000 Sobic003G117800--Sobic001G356200 Sobic001G385000 Sobic001G385000 Sobic003G117800--Sobic001G385000 Sobic003G117800--Sobic009G046900 Sobic003G353700--Sobic007G192400 Sobic003G353700--Sobic008G036600 Sobic005G063200 Sobic005G063200 Sobic003G353700--Sobic005G063200 Sobic001G024400 Sobic001G024400 Sobic003G353700--Sobic001G024400 Sobic003G353700--Sobic007G039200 Sobic003G353700--Sobic010G181600 Sobic003G236000 Sobic003G236000 Sobic003G353700--Sobic003G236000 Sobic004G074600 Sobic004G074600 Sobic003G353700--Sobic004G074600 Sobic003G353700--Sobic008G006000
Octagon: transcription factors


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