Gene annotation
Transcriptome id Sobic.008G006000.3,Sobic.008G006000.2,Sobic.008G006000.1
Synonym Sb08g000650
Functional annotation expressed protein
UniProt C5YQ36 , A0A1B6PAN3
Pfam -
Panther DB PTHR36377 PTHR36377:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62450 : -
RAP-DB (Rice) LOC_Os11g01594.1 : expressed protein
MaizeGDB (Corn) Zm00025a028936 , Zm00025a013211
Brachypodium KQJ92620 , KQJ89615
Barley -
Wheat TraesCS5A02G151900 , TraesCS5B02G150500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G181600 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
2 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
3 Sobic.003G353700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
4 Sobic.004G141400 START domain containing protein, putative, expressed -
5 Sobic.007G077532 - K08597: SENP8, NEDP1, sentrin-specific protease 8
6 Sobic.010G255900 DNL zinc finger domain containing protein, putative, expressed K17808: ZIM17, DNLZ, mitochondrial protein import protein ZIM17
7 Sobic.005G185500 - -
8 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
9 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
10 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
11 Sobic.001G057400 expressed protein -
12 Sobic.008G036600 expressed protein -
13 Sobic.004G004100 nucleic acid binding protein, putative, expressed -
14 Sobic.003G402800 DUF647 domain containing protein, putative, expressed -
15 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
16 Sobic.003G250400 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.004G259300 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K15687: E3 ubiquitin-protein ligase makorin
18 Sobic.010G225201 - -
19 Sobic.005G063200 expressed protein -
20 Sobic.005G170000 expressed protein -


Gene co-expression network
sample Sobic008G006000 Sobic008G006000 Sobic010G181600 Sobic010G181600 Sobic008G006000--Sobic010G181600 Sobic007G192400 Sobic007G192400 Sobic008G006000--Sobic007G192400 Sobic003G353700 Sobic003G353700 Sobic008G006000--Sobic003G353700 Sobic004G141400 Sobic004G141400 Sobic008G006000--Sobic004G141400 Sobic007G077532 Sobic007G077532 Sobic008G006000--Sobic007G077532 Sobic010G255900 Sobic010G255900 Sobic008G006000--Sobic010G255900 Sobic005G185500 Sobic005G185500 Sobic008G006000--Sobic005G185500 Sobic003G117800 Sobic003G117800 Sobic008G006000--Sobic003G117800 Sobic001G280500 Sobic001G280500 Sobic008G006000--Sobic001G280500 Sobic003G058500 Sobic003G058500 Sobic010G181600--Sobic003G058500 Sobic001G424800 Sobic001G424800 Sobic010G181600--Sobic001G424800 Sobic010G181600--Sobic003G117800 Sobic001G475300 Sobic001G475300 Sobic010G181600--Sobic001G475300 Sobic010G181600--Sobic008G006000 Sobic010G181600--Sobic003G353700 Sobic007G218600 Sobic007G218600 Sobic010G181600--Sobic007G218600 Sobic004G004100 Sobic004G004100 Sobic010G181600--Sobic004G004100 Sobic003G250400 Sobic003G250400 Sobic010G181600--Sobic003G250400 Sobic007G192400--Sobic003G353700 Sobic007G192400--Sobic008G006000 Sobic007G192400--Sobic007G077532 Sobic007G192400--Sobic010G181600 Sobic009G252300 Sobic009G252300 Sobic007G192400--Sobic009G252300 Sobic004G259300 Sobic004G259300 Sobic007G192400--Sobic004G259300 Sobic002G203600 Sobic002G203600 Sobic007G192400--Sobic002G203600 Sobic008G036600 Sobic008G036600 Sobic007G192400--Sobic008G036600 Sobic007G192400--Sobic004G141400 Sobic003G353700--Sobic007G192400 Sobic003G353700--Sobic008G036600 Sobic005G063200 Sobic005G063200 Sobic003G353700--Sobic005G063200 Sobic001G024400 Sobic001G024400 Sobic003G353700--Sobic001G024400 Sobic007G039200 Sobic007G039200 Sobic003G353700--Sobic007G039200 Sobic003G353700--Sobic010G181600 Sobic003G236000 Sobic003G236000 Sobic003G353700--Sobic003G236000 Sobic004G074600 Sobic004G074600 Sobic003G353700--Sobic004G074600 Sobic003G353700--Sobic008G006000 Sobic004G141400--Sobic007G077532 Sobic004G141400--Sobic008G006000 Sobic004G141400--Sobic010G181600 Sobic004G141400--Sobic004G259300 Sobic004G141400--Sobic007G192400 Sobic001G356200 Sobic001G356200 Sobic004G141400--Sobic001G356200 Sobic004G141400--Sobic004G004100 Sobic004G141400--Sobic003G117800 Sobic004G141400--Sobic003G353700 Sobic007G077532--Sobic004G141400 Sobic001G057400 Sobic001G057400 Sobic007G077532--Sobic001G057400 Sobic007G077532--Sobic007G192400 Sobic007G077532--Sobic004G004100 Sobic007G077532--Sobic005G185500 Sobic007G077532--Sobic010G181600 Sobic007G077532--Sobic003G353700 Sobic007G077532--Sobic008G006000 Sobic007G077532--Sobic003G117800 Sobic010G255900--Sobic005G185500 Sobic006G162400 Sobic006G162400 Sobic010G255900--Sobic006G162400 Sobic010G255900--Sobic001G356200 Sobic003G385300 Sobic003G385300 Sobic010G255900--Sobic003G385300 Sobic001G504500 Sobic001G504500 Sobic010G255900--Sobic001G504500 Sobic001G149000 Sobic001G149000 Sobic010G255900--Sobic001G149000 Sobic010G255900--Sobic003G117800 Sobic010G255900--Sobic003G353700 Sobic003G428000 Sobic003G428000 Sobic010G255900--Sobic003G428000 Sobic002G389600 Sobic002G389600 Sobic005G185500--Sobic002G389600 Sobic005G185500--Sobic003G385300 Sobic006G093600 Sobic006G093600 Sobic005G185500--Sobic006G093600 Sobic005G185500--Sobic007G039200 Sobic006G001100 Sobic006G001100 Sobic005G185500--Sobic006G001100 Sobic005G225500 Sobic005G225500 Sobic005G185500--Sobic005G225500 Sobic002G102300 Sobic002G102300 Sobic005G185500--Sobic002G102300 Sobic006G162500 Sobic006G162500 Sobic005G185500--Sobic006G162500 Sobic003G402800 Sobic003G402800 Sobic005G185500--Sobic003G402800 Sobic003G117800--Sobic001G424800 Sobic003G117800--Sobic003G385300 Sobic003G394500 Sobic003G394500 Sobic003G117800--Sobic003G394500 Sobic003G117800--Sobic001G057400 Sobic008G152700 Sobic008G152700 Sobic003G117800--Sobic008G152700 Sobic003G117800--Sobic001G149000 Sobic003G117800--Sobic001G356200 Sobic001G385000 Sobic001G385000 Sobic003G117800--Sobic001G385000 Sobic009G046900 Sobic009G046900 Sobic003G117800--Sobic009G046900 Sobic002G414800 Sobic002G414800 Sobic001G280500--Sobic002G414800 Sobic001G280500--Sobic001G149000 Sobic001G280500--Sobic005G063200 Sobic001G384200 Sobic001G384200 Sobic001G280500--Sobic001G384200 Sobic008G166100 Sobic008G166100 Sobic001G280500--Sobic008G166100 Sobic008G022400 Sobic008G022400 Sobic001G280500--Sobic008G022400 Sobic010G160300 Sobic010G160300 Sobic001G280500--Sobic010G160300 Sobic001G280500--Sobic001G424800 Sobic006G265800 Sobic006G265800 Sobic001G280500--Sobic006G265800
Octagon: transcription factors


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