Gene annotation
Transcriptome id Sobic.010G181600.2
Synonym Sb10g023300
Functional annotation WD domain, G-beta repeat domain containing protein, expressed
UniProt C5Z5K3
Pfam PF00400
Panther DB PTHR19877
NCBI CDD -
KEGG Orthology K13137; STRAP, serine-threonine kinase receptor-associated protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G52730 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os06g39760.1 : WD domain, G-beta repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a051235 , Zm00025a042243
Brachypodium KQK17804
Barley HORVU1Hr1G058470.6 , HORVU1Hr1G058470.1 , HORVU1Hr1G058470.16 , HORVU1Hr1G058470.15 , HORVU1Hr1G058470.14 , HORVU1Hr1G058470.13 , HORVU1Hr1G058470.12 , HORVU5Hr1G035620.2 , HORVU5Hr1G035620.1 , HORVU7Hr1G084630.4 , HORVU7Hr1G084630.2 , HORVU7Hr1G084630.3 , HORVU7Hr1G084630.1 , HORVU5Hr1G058430.2 , HORVU5Hr1G058430.1 , HORVU1Hr1G058470.17 , HORVU1Hr1G058470.11 , HORVU1Hr1G058470.10 , HORVU1Hr1G058470.9 , HORVU1Hr1G058470.8 , HORVU1Hr1G058470.7 , HORVU1Hr1G058470.5 , HORVU1Hr1G058470.4 , HORVU1Hr1G058470.3 , HORVU1Hr1G058470.2 , HORVU7Hr1G085770.1
Wheat TraesCS7A02G372500 , TraesCS7A02G372500 , TraesCS5B02G194400 , TraesCS5A02G189200 , TraesCS5A02G189200 , TraesCS7D02G350400 , TraesCS5D02G201800 , TraesCS7B02G254800
Populus -


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cDNA sequences
Sobic.010G181600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G058500 expressed protein -
2 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
3 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
4 Sobic.001G475300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
5 Sobic.008G006000 expressed protein -
6 Sobic.003G353700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
7 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
8 Sobic.004G004100 nucleic acid binding protein, putative, expressed -
9 Sobic.003G250400 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
11 Sobic.008G152700 expressed protein K07541: GPI mannosyltransferase 1 subunit X
12 Sobic.007G077532 - K08597: SENP8, NEDP1, sentrin-specific protease 8
13 Sobic.002G397900 39S ribosomal protein L46, mitochondrial precursor, putative, expressed K17427: large subunit ribosomal protein L46
14 Sobic.004G141400 START domain containing protein, putative, expressed -
15 Sobic.007G223100 adenylate kinase, putative, expressed K13800: CMPK1, UMP-CMP kinase
16 Sobic.004G350700 kelch repeat protein, putative, expressed -
17 Sobic.005G063200 expressed protein -
18 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
19 Sobic.001G141400 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
20 Sobic.001G385000 nucleoside-triphosphatase, putative, expressed K14641: apyrase


Gene co-expression network
sample Sobic010G181600 Sobic010G181600 Sobic003G058500 Sobic003G058500 Sobic010G181600--Sobic003G058500 Sobic001G424800 Sobic001G424800 Sobic010G181600--Sobic001G424800 Sobic003G117800 Sobic003G117800 Sobic010G181600--Sobic003G117800 Sobic001G475300 Sobic001G475300 Sobic010G181600--Sobic001G475300 Sobic008G006000 Sobic008G006000 Sobic010G181600--Sobic008G006000 Sobic003G353700 Sobic003G353700 Sobic010G181600--Sobic003G353700 Sobic007G218600 Sobic007G218600 Sobic010G181600--Sobic007G218600 Sobic004G004100 Sobic004G004100 Sobic010G181600--Sobic004G004100 Sobic003G250400 Sobic003G250400 Sobic010G181600--Sobic003G250400 Sobic003G058500--Sobic001G424800 Sobic003G058500--Sobic010G181600 Sobic007G172700 Sobic007G172700 Sobic003G058500--Sobic007G172700 Sobic001G047600 Sobic001G047600 Sobic003G058500--Sobic001G047600 Sobic004G350700 Sobic004G350700 Sobic003G058500--Sobic004G350700 Sobic002G355800 Sobic002G355800 Sobic003G058500--Sobic002G355800 Sobic001G378800 Sobic001G378800 Sobic003G058500--Sobic001G378800 Sobic008G152700 Sobic008G152700 Sobic003G058500--Sobic008G152700 Sobic003G058500--Sobic003G117800 Sobic001G424800--Sobic003G117800 Sobic001G424800--Sobic003G058500 Sobic001G424800--Sobic004G350700 Sobic001G356200 Sobic001G356200 Sobic001G424800--Sobic001G356200 Sobic001G149000 Sobic001G149000 Sobic001G424800--Sobic001G149000 Sobic001G280500 Sobic001G280500 Sobic001G424800--Sobic001G280500 Sobic003G394500 Sobic003G394500 Sobic001G424800--Sobic003G394500 Sobic003G385300 Sobic003G385300 Sobic001G424800--Sobic003G385300 Sobic001G424800--Sobic001G378800 Sobic003G117800--Sobic001G424800 Sobic003G117800--Sobic003G385300 Sobic003G117800--Sobic003G394500 Sobic001G057400 Sobic001G057400 Sobic003G117800--Sobic001G057400 Sobic003G117800--Sobic008G152700 Sobic003G117800--Sobic001G149000 Sobic003G117800--Sobic001G356200 Sobic001G385000 Sobic001G385000 Sobic003G117800--Sobic001G385000 Sobic009G046900 Sobic009G046900 Sobic003G117800--Sobic009G046900 Sobic001G475300--Sobic003G250400 Sobic001G475300--Sobic010G181600 Sobic001G141400 Sobic001G141400 Sobic001G475300--Sobic001G141400 Sobic001G475300--Sobic003G117800 Sobic001G475300--Sobic007G172700 Sobic001G475300--Sobic002G355800 Sobic001G475300--Sobic003G058500 Sobic001G475300--Sobic008G152700 Sobic004G302800 Sobic004G302800 Sobic001G475300--Sobic004G302800 Sobic008G006000--Sobic010G181600 Sobic007G192400 Sobic007G192400 Sobic008G006000--Sobic007G192400 Sobic008G006000--Sobic003G353700 Sobic004G141400 Sobic004G141400 Sobic008G006000--Sobic004G141400 Sobic007G077532 Sobic007G077532 Sobic008G006000--Sobic007G077532 Sobic010G255900 Sobic010G255900 Sobic008G006000--Sobic010G255900 Sobic005G185500 Sobic005G185500 Sobic008G006000--Sobic005G185500 Sobic008G006000--Sobic003G117800 Sobic008G006000--Sobic001G280500 Sobic003G353700--Sobic007G192400 Sobic008G036600 Sobic008G036600 Sobic003G353700--Sobic008G036600 Sobic005G063200 Sobic005G063200 Sobic003G353700--Sobic005G063200 Sobic001G024400 Sobic001G024400 Sobic003G353700--Sobic001G024400 Sobic007G039200 Sobic007G039200 Sobic003G353700--Sobic007G039200 Sobic003G353700--Sobic010G181600 Sobic003G236000 Sobic003G236000 Sobic003G353700--Sobic003G236000 Sobic004G074600 Sobic004G074600 Sobic003G353700--Sobic004G074600 Sobic003G353700--Sobic008G006000 Sobic009G186700 Sobic009G186700 Sobic007G218600--Sobic009G186700 Sobic001G305900 Sobic001G305900 Sobic007G218600--Sobic001G305900 Sobic007G148400 Sobic007G148400 Sobic007G218600--Sobic007G148400 Sobic003G255700 Sobic003G255700 Sobic007G218600--Sobic003G255700 Sobic007G218600--Sobic001G280500 Sobic003G308300 Sobic003G308300 Sobic007G218600--Sobic003G308300 Sobic001G114200 Sobic001G114200 Sobic007G218600--Sobic001G114200 Sobic007G218600--Sobic010G181600 Sobic010G160300 Sobic010G160300 Sobic007G218600--Sobic010G160300 Sobic004G004100--Sobic010G181600 Sobic004G004100--Sobic007G077532 Sobic004G004100--Sobic001G356200 Sobic004G004100--Sobic008G152700 Sobic003G428000 Sobic003G428000 Sobic004G004100--Sobic003G428000 Sobic004G004100--Sobic009G046900 Sobic004G004100--Sobic003G058500 Sobic004G004100--Sobic003G117800 Sobic004G004100--Sobic001G149000 Sobic003G250400--Sobic001G475300 Sobic003G198900 Sobic003G198900 Sobic003G250400--Sobic003G198900 Sobic001G257800 Sobic001G257800 Sobic003G250400--Sobic001G257800 Sobic003G250400--Sobic003G428000 Sobic004G082800 Sobic004G082800 Sobic003G250400--Sobic004G082800 Sobic010G024400 Sobic010G024400 Sobic003G250400--Sobic010G024400 Sobic003G250400--Sobic010G181600 Sobic003G250400--Sobic003G117800 Sobic003G250400--Sobic001G141400
Octagon: transcription factors


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