Gene annotation
Transcriptome id Sobic.001G141400.2,Sobic.001G141400.3,Sobic.001G141400.1
Synonym Sb01g012310
Functional annotation ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed
UniProt C5WQ97
Pfam PF11955
Panther DB PTHR31476 PTHR31476:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G79120 : Ubiquitin carboxyl-terminal hydrolase family protein
RAP-DB (Rice) LOC_Os03g46460.1 : ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed
MaizeGDB (Corn) Zm00025a007516 , Zm00025a055787 , Zm00025a051572
Brachypodium KQK07690
Barley HORVU4Hr1G003190.11 , HORVU4Hr1G003190.10 , HORVU4Hr1G003190.13 , HORVU4Hr1G003190.12 , HORVU4Hr1G003190.15 , HORVU4Hr1G003190.14 , HORVU4Hr1G003190.17 , HORVU4Hr1G003190.16 , HORVU4Hr1G003190.5 , HORVU4Hr1G003190.4 , HORVU4Hr1G003190.7 , HORVU4Hr1G003190.6 , HORVU4Hr1G003190.3 , HORVU4Hr1G003190.9 , HORVU4Hr1G003190.8 , HORVU7Hr1G100510.1 , HORVU7Hr1G100510.2 , HORVU7Hr1G100510.3 , HORVU7Hr1G100510.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G475300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
2 Sobic.009G252300 expressed protein -
3 Sobic.003G250400 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
5 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
6 Sobic.007G172700 ECT5, putative, expressed -
7 Sobic.001G490900 growth regulator related protein, putative, expressed -
8 Sobic.002G200000 zinc finger, C3HC4 type, putative, expressed -
9 Sobic.003G039900 OsFBDUF1 - F-box and DUF domain containing protein, expressed -
10 Sobic.003G428000 expressed protein -
11 Sobic.010G181600 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
12 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
13 Sobic.001G057400 expressed protein -
14 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
15 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
16 Sobic.008G152700 expressed protein K07541: GPI mannosyltransferase 1 subunit X
17 Sobic.003G058500 expressed protein -
18 Sobic.007G223100 adenylate kinase, putative, expressed K13800: CMPK1, UMP-CMP kinase
19 Sobic.003G181700 GPI mannosyltransferase 2, putative, expressed K07542: GPI mannosyltransferase 2
20 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35


Gene co-expression network
sample Sobic001G141400 Sobic001G141400 Sobic001G475300 Sobic001G475300 Sobic001G141400--Sobic001G475300 Sobic009G252300 Sobic009G252300 Sobic001G141400--Sobic009G252300 Sobic003G250400 Sobic003G250400 Sobic001G141400--Sobic003G250400 Sobic009G194000 Sobic009G194000 Sobic001G141400--Sobic009G194000 Sobic003G190200 Sobic003G190200 Sobic001G141400--Sobic003G190200 Sobic007G172700 Sobic007G172700 Sobic001G141400--Sobic007G172700 Sobic001G490900 Sobic001G490900 Sobic001G141400--Sobic001G490900 Sobic002G200000 Sobic002G200000 Sobic001G141400--Sobic002G200000 Sobic003G039900 Sobic003G039900 Sobic001G141400--Sobic003G039900 Sobic001G475300--Sobic003G250400 Sobic010G181600 Sobic010G181600 Sobic001G475300--Sobic010G181600 Sobic001G475300--Sobic001G141400 Sobic003G117800 Sobic003G117800 Sobic001G475300--Sobic003G117800 Sobic001G475300--Sobic007G172700 Sobic002G355800 Sobic002G355800 Sobic001G475300--Sobic002G355800 Sobic003G058500 Sobic003G058500 Sobic001G475300--Sobic003G058500 Sobic008G152700 Sobic008G152700 Sobic001G475300--Sobic008G152700 Sobic004G302800 Sobic004G302800 Sobic001G475300--Sobic004G302800 Sobic003G428000 Sobic003G428000 Sobic009G252300--Sobic003G428000 Sobic009G252300--Sobic003G190200 Sobic001G149000 Sobic001G149000 Sobic009G252300--Sobic001G149000 Sobic009G252300--Sobic001G141400 Sobic005G123400 Sobic005G123400 Sobic009G252300--Sobic005G123400 Sobic009G252300--Sobic003G117800 Sobic010G134650 Sobic010G134650 Sobic009G252300--Sobic010G134650 Sobic007G192400 Sobic007G192400 Sobic009G252300--Sobic007G192400 Sobic009G252300--Sobic008G152700 Sobic003G250400--Sobic001G475300 Sobic003G198900 Sobic003G198900 Sobic003G250400--Sobic003G198900 Sobic001G257800 Sobic001G257800 Sobic003G250400--Sobic001G257800 Sobic003G250400--Sobic003G428000 Sobic004G082800 Sobic004G082800 Sobic003G250400--Sobic004G082800 Sobic010G024400 Sobic010G024400 Sobic003G250400--Sobic010G024400 Sobic003G250400--Sobic010G181600 Sobic003G250400--Sobic003G117800 Sobic003G250400--Sobic001G141400 Sobic003G181700 Sobic003G181700 Sobic009G194000--Sobic003G181700 Sobic003G021600 Sobic003G021600 Sobic009G194000--Sobic003G021600 Sobic009G194000--Sobic001G490900 Sobic010G169900 Sobic010G169900 Sobic009G194000--Sobic010G169900 Sobic004G122900 Sobic004G122900 Sobic009G194000--Sobic004G122900 Sobic001G308400 Sobic001G308400 Sobic009G194000--Sobic001G308400 Sobic009G194000--Sobic003G190200 Sobic006G060000 Sobic006G060000 Sobic009G194000--Sobic006G060000 Sobic009G194000--Sobic001G141400 Sobic007G030100 Sobic007G030100 Sobic003G190200--Sobic007G030100 Sobic003G394500 Sobic003G394500 Sobic003G190200--Sobic003G394500 Sobic003G190200--Sobic007G172700 Sobic003G190200--Sobic003G021600 Sobic003G190200--Sobic009G252300 Sobic001G424800 Sobic001G424800 Sobic003G190200--Sobic001G424800 Sobic003G393200 Sobic003G393200 Sobic003G190200--Sobic003G393200 Sobic003G190200--Sobic003G428000 Sobic001G385000 Sobic001G385000 Sobic003G190200--Sobic001G385000 Sobic007G172700--Sobic006G060000 Sobic004G350700 Sobic004G350700 Sobic007G172700--Sobic004G350700 Sobic007G172700--Sobic008G152700 Sobic007G172700--Sobic003G190200 Sobic007G172700--Sobic003G394500 Sobic007G172700--Sobic003G058500 Sobic007G172700--Sobic002G355800 Sobic007G172700--Sobic001G424800 Sobic007G172700--Sobic007G030100 Sobic001G490900--Sobic009G194000 Sobic001G490900--Sobic006G060000 Sobic001G114200 Sobic001G114200 Sobic001G490900--Sobic001G114200 Sobic001G490900--Sobic010G169900 Sobic001G490900--Sobic003G181700 Sobic002G079000 Sobic002G079000 Sobic001G490900--Sobic002G079000 Sobic009G122500 Sobic009G122500 Sobic001G490900--Sobic009G122500 Sobic001G490900--Sobic007G172700 Sobic001G490900--Sobic001G141400 Sobic002G200000--Sobic006G060000 Sobic007G076400 Sobic007G076400 Sobic002G200000--Sobic007G076400 Sobic008G116700 Sobic008G116700 Sobic002G200000--Sobic008G116700 Sobic002G200000--Sobic001G141400 Sobic006G115100 Sobic006G115100 Sobic002G200000--Sobic006G115100 Sobic008G055500 Sobic008G055500 Sobic002G200000--Sobic008G055500 Sobic002G200000--Sobic007G172700 Sobic007G087000 Sobic007G087000 Sobic002G200000--Sobic007G087000 Sobic002G200000--Sobic002G355800 Sobic003G039900--Sobic001G141400 Sobic007G147400 Sobic007G147400 Sobic003G039900--Sobic007G147400 Sobic006G234700 Sobic006G234700 Sobic003G039900--Sobic006G234700 Sobic003G444800 Sobic003G444800 Sobic003G039900--Sobic003G444800 Sobic004G111700 Sobic004G111700 Sobic003G039900--Sobic004G111700 Sobic002G103600 Sobic002G103600 Sobic003G039900--Sobic002G103600 Sobic009G228000 Sobic009G228000 Sobic003G039900--Sobic009G228000 Sobic001G376100 Sobic001G376100 Sobic003G039900--Sobic001G376100 Sobic001G376200 Sobic001G376200 Sobic003G039900--Sobic001G376200
Octagon: transcription factors


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