Gene annotation
Transcriptome id Sobic.005G207400.1
Synonym
Functional annotation -
UniProt A0A1B6PTS7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.005G207400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
2 Sobic.004G025300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
3 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
4 Sobic.001G261432 - -
5 Sobic.001G332300 expressed protein -
6 Sobic.007G077532 - K08597: SENP8, NEDP1, sentrin-specific protease 8
7 Sobic.001G312500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
8 Sobic.001G127000 alkaline phytoceramidase, putative, expressed K04711: ACER3, dihydroceramidase
9 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
11 Sobic.009G162100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
12 Sobic.003G043800 BT1 family protein, putative, expressed -
13 Sobic.004G130400 OsPOP5 - Putative Prolyl Oligopeptidase homologue, expressed K01278: DPP4, dipeptidyl-peptidase 4
14 Sobic.007G156200 glycoprotein 3-alpha-L-fucosyltransferase A, putative, expressed K00753: glycoprotein 3-alpha-L-fucosyltransferase
15 Sobic.003G190600 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
16 Sobic.003G036500 fruit protein PKIWI502, putative, expressed -
17 Sobic.004G060300 DNA binding protein, putative, expressed -
18 Sobic.004G068100 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
19 Sobic.008G168200 expressed protein -
20 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -


Gene co-expression network
sample Sobic005G207400 Sobic005G207400 Sobic001G378200 Sobic001G378200 Sobic005G207400--Sobic001G378200 Sobic004G025300 Sobic004G025300 Sobic005G207400--Sobic004G025300 Sobic004G078700 Sobic004G078700 Sobic005G207400--Sobic004G078700 Sobic001G261432 Sobic001G261432 Sobic005G207400--Sobic001G261432 Sobic001G332300 Sobic001G332300 Sobic005G207400--Sobic001G332300 Sobic007G077532 Sobic007G077532 Sobic005G207400--Sobic007G077532 Sobic001G312500 Sobic001G312500 Sobic005G207400--Sobic001G312500 Sobic001G127000 Sobic001G127000 Sobic005G207400--Sobic001G127000 Sobic003G202600 Sobic003G202600 Sobic005G207400--Sobic003G202600 Sobic001G465400 Sobic001G465400 Sobic001G378200--Sobic001G465400 Sobic001G112400 Sobic001G112400 Sobic001G378200--Sobic001G112400 Sobic006G012700 Sobic006G012700 Sobic001G378200--Sobic006G012700 Sobic001G378200--Sobic004G078700 Sobic004G039400 Sobic004G039400 Sobic001G378200--Sobic004G039400 Sobic001G443200 Sobic001G443200 Sobic001G378200--Sobic001G443200 Sobic001G008100 Sobic001G008100 Sobic001G378200--Sobic001G008100 Sobic002G262200 Sobic002G262200 Sobic001G378200--Sobic002G262200 Sobic001G378200--Sobic005G207400 Sobic004G025300--Sobic001G332300 Sobic005G184200 Sobic005G184200 Sobic004G025300--Sobic005G184200 Sobic004G207900 Sobic004G207900 Sobic004G025300--Sobic004G207900 Sobic008G110500 Sobic008G110500 Sobic004G025300--Sobic008G110500 Sobic004G025300--Sobic001G378200 Sobic006G083100 Sobic006G083100 Sobic004G025300--Sobic006G083100 Sobic001G451901 Sobic001G451901 Sobic004G025300--Sobic001G451901 Sobic004G025300--Sobic005G207400 Sobic001G408100 Sobic001G408100 Sobic004G025300--Sobic001G408100 Sobic001G389200 Sobic001G389200 Sobic004G078700--Sobic001G389200 Sobic004G078700--Sobic001G465400 Sobic004G100200 Sobic004G100200 Sobic004G078700--Sobic004G100200 Sobic010G223400 Sobic010G223400 Sobic004G078700--Sobic010G223400 Sobic002G355800 Sobic002G355800 Sobic004G078700--Sobic002G355800 Sobic004G254800 Sobic004G254800 Sobic004G078700--Sobic004G254800 Sobic007G118500 Sobic007G118500 Sobic004G078700--Sobic007G118500 Sobic004G078700--Sobic001G378200 Sobic003G316200 Sobic003G316200 Sobic004G078700--Sobic003G316200 Sobic001G261432--Sobic005G207400 Sobic008G168200 Sobic008G168200 Sobic001G261432--Sobic008G168200 Sobic004G130400 Sobic004G130400 Sobic001G261432--Sobic004G130400 Sobic002G294100 Sobic002G294100 Sobic001G261432--Sobic002G294100 Sobic003G212100 Sobic003G212100 Sobic001G261432--Sobic003G212100 Sobic002G238400 Sobic002G238400 Sobic001G261432--Sobic002G238400 Sobic001G261432--Sobic004G025300 Sobic006G087400 Sobic006G087400 Sobic001G261432--Sobic006G087400 Sobic001G205100 Sobic001G205100 Sobic001G261432--Sobic001G205100 Sobic001G332300--Sobic005G184200 Sobic001G332300--Sobic001G378200 Sobic001G332300--Sobic004G025300 Sobic001G332300--Sobic001G112400 Sobic001G404200 Sobic001G404200 Sobic001G332300--Sobic001G404200 Sobic001G358500 Sobic001G358500 Sobic001G332300--Sobic001G358500 Sobic001G332300--Sobic006G083100 Sobic003G374000 Sobic003G374000 Sobic001G332300--Sobic003G374000 Sobic002G136400 Sobic002G136400 Sobic001G332300--Sobic002G136400 Sobic004G141400 Sobic004G141400 Sobic007G077532--Sobic004G141400 Sobic001G057400 Sobic001G057400 Sobic007G077532--Sobic001G057400 Sobic007G192400 Sobic007G192400 Sobic007G077532--Sobic007G192400 Sobic004G004100 Sobic004G004100 Sobic007G077532--Sobic004G004100 Sobic005G185500 Sobic005G185500 Sobic007G077532--Sobic005G185500 Sobic010G181600 Sobic010G181600 Sobic007G077532--Sobic010G181600 Sobic003G353700 Sobic003G353700 Sobic007G077532--Sobic003G353700 Sobic008G006000 Sobic008G006000 Sobic007G077532--Sobic008G006000 Sobic003G117800 Sobic003G117800 Sobic007G077532--Sobic003G117800 Sobic001G511300 Sobic001G511300 Sobic001G312500--Sobic001G511300 Sobic006G217300 Sobic006G217300 Sobic001G312500--Sobic006G217300 Sobic001G312500--Sobic001G378200 Sobic001G312500--Sobic003G202600 Sobic001G312500--Sobic005G207400 Sobic001G312500--Sobic004G100200 Sobic007G026800 Sobic007G026800 Sobic001G312500--Sobic007G026800 Sobic003G043800 Sobic003G043800 Sobic001G312500--Sobic003G043800 Sobic002G214400 Sobic002G214400 Sobic001G312500--Sobic002G214400 Sobic009G257200 Sobic009G257200 Sobic001G127000--Sobic009G257200 Sobic002G361300 Sobic002G361300 Sobic001G127000--Sobic002G361300 Sobic002G067600 Sobic002G067600 Sobic001G127000--Sobic002G067600 Sobic003G270600 Sobic003G270600 Sobic001G127000--Sobic003G270600 Sobic003G187200 Sobic003G187200 Sobic001G127000--Sobic003G187200 Sobic004G003501 Sobic004G003501 Sobic001G127000--Sobic004G003501 Sobic006G126100 Sobic006G126100 Sobic001G127000--Sobic006G126100 Sobic007G120500 Sobic007G120500 Sobic001G127000--Sobic007G120500 Sobic006G194500 Sobic006G194500 Sobic001G127000--Sobic006G194500 Sobic001G095000 Sobic001G095000 Sobic003G202600--Sobic001G095000 Sobic002G079000 Sobic002G079000 Sobic003G202600--Sobic002G079000 Sobic003G202600--Sobic002G355800 Sobic007G087000 Sobic007G087000 Sobic003G202600--Sobic007G087000 Sobic001G237600 Sobic001G237600 Sobic003G202600--Sobic001G237600 Sobic010G169900 Sobic010G169900 Sobic003G202600--Sobic010G169900 Sobic003G202600--Sobic001G389200 Sobic006G060000 Sobic006G060000 Sobic003G202600--Sobic006G060000 Sobic003G302200 Sobic003G302200 Sobic003G202600--Sobic003G302200
Octagon: transcription factors


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