Gene annotation
Transcriptome id Sobic.003G043800.1
Synonym Sb03g003850
Functional annotation BT1 family protein, putative, expressed
UniProt H0I4G1 , C5XMQ8
Pfam PF07690
Panther DB PTHR31585 PTHR31585:SF7
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G54860 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os01g14100.1 : BT1 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a023185
Brachypodium PNT70244 , KQK03556 , KQK03554 , KQK03555 , KQK03553
Barley HORVU3Hr1G033490.2 , HORVU3Hr1G033490.3 , HORVU3Hr1G033490.8 , HORVU3Hr1G033490.9 , HORVU3Hr1G033490.4 , HORVU3Hr1G033490.5 , HORVU3Hr1G033490.6 , HORVU3Hr1G033490.7 , HORVU3Hr1G033490.1
Wheat TraesCS3D02G172300 , TraesCS3B02G197300 , TraesCS3B02G197100 , TraesCS3D02G172600 , TraesCS3A02G169200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G217300 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12448: UXE, UDP-arabinose 4-epimerase
2 Sobic.001G122500 SNARE associated Golgi protein, putative, expressed -
3 Sobic.010G026300 hypersensitive-induced response protein, putative, expressed -
4 Sobic.004G124500 transporter family protein, putative, expressed -
5 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
6 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
7 Sobic.006G207900 DNA binding protein, putative, expressed -
8 Sobic.006G055400 hydroxyproline-rich glycoprotein family protein, putative, expressed -
9 Sobic.005G207400 - -
10 Sobic.004G100200 protein phosphatase 1 regulatory subunit SDS22, putative, expressed K17550: PPP1R7, protein phosphatase 1 regulatory subunit 7
11 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
12 Sobic.001G312500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
13 Sobic.001G332300 expressed protein -
14 Sobic.004G025300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
15 Sobic.009G050500 nifU, putative, expressed -
16 Sobic.001G284400 jmjC domain containing protein, expressed -
17 Sobic.003G119700 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.001G122000 oxysterol-binding protein, putative, expressed -
19 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
20 Sobic.005G184200 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein


Gene co-expression network
sample Sobic003G043800 Sobic003G043800 Sobic006G217300 Sobic006G217300 Sobic003G043800--Sobic006G217300 Sobic001G122500 Sobic001G122500 Sobic003G043800--Sobic001G122500 Sobic010G026300 Sobic010G026300 Sobic003G043800--Sobic010G026300 Sobic004G124500 Sobic004G124500 Sobic003G043800--Sobic004G124500 Sobic004G207900 Sobic004G207900 Sobic003G043800--Sobic004G207900 Sobic001G378200 Sobic001G378200 Sobic003G043800--Sobic001G378200 Sobic006G207900 Sobic006G207900 Sobic003G043800--Sobic006G207900 Sobic006G055400 Sobic006G055400 Sobic003G043800--Sobic006G055400 Sobic005G207400 Sobic005G207400 Sobic003G043800--Sobic005G207400 Sobic006G217300--Sobic001G122500 Sobic006G217300--Sobic006G207900 Sobic007G026800 Sobic007G026800 Sobic006G217300--Sobic007G026800 Sobic006G217300--Sobic003G043800 Sobic010G064600 Sobic010G064600 Sobic006G217300--Sobic010G064600 Sobic001G312500 Sobic001G312500 Sobic006G217300--Sobic001G312500 Sobic002G431000 Sobic002G431000 Sobic006G217300--Sobic002G431000 Sobic010G184300 Sobic010G184300 Sobic006G217300--Sobic010G184300 Sobic004G228800 Sobic004G228800 Sobic006G217300--Sobic004G228800 Sobic001G122500--Sobic006G217300 Sobic001G214200 Sobic001G214200 Sobic001G122500--Sobic001G214200 Sobic004G350300 Sobic004G350300 Sobic001G122500--Sobic004G350300 Sobic006G263100 Sobic006G263100 Sobic001G122500--Sobic006G263100 Sobic010G188100 Sobic010G188100 Sobic001G122500--Sobic010G188100 Sobic003G002400 Sobic003G002400 Sobic001G122500--Sobic003G002400 Sobic010G026700 Sobic010G026700 Sobic001G122500--Sobic010G026700 Sobic001G409900 Sobic001G409900 Sobic001G122500--Sobic001G409900 Sobic002G214900 Sobic002G214900 Sobic001G122500--Sobic002G214900 Sobic010G026300--Sobic003G043800 Sobic001G122000 Sobic001G122000 Sobic010G026300--Sobic001G122000 Sobic009G031200 Sobic009G031200 Sobic010G026300--Sobic009G031200 Sobic003G270600 Sobic003G270600 Sobic010G026300--Sobic003G270600 Sobic010G026300--Sobic006G055400 Sobic003G407200 Sobic003G407200 Sobic010G026300--Sobic003G407200 Sobic010G026300--Sobic004G124500 Sobic009G219000 Sobic009G219000 Sobic010G026300--Sobic009G219000 Sobic003G273500 Sobic003G273500 Sobic010G026300--Sobic003G273500 Sobic007G056600 Sobic007G056600 Sobic004G124500--Sobic007G056600 Sobic007G180600 Sobic007G180600 Sobic004G124500--Sobic007G180600 Sobic003G269800 Sobic003G269800 Sobic004G124500--Sobic003G269800 Sobic004G100200 Sobic004G100200 Sobic004G124500--Sobic004G100200 Sobic004G124500--Sobic003G043800 Sobic004G124500--Sobic004G228800 Sobic004G124500--Sobic004G207900 Sobic009G099200 Sobic009G099200 Sobic004G124500--Sobic009G099200 Sobic004G236200 Sobic004G236200 Sobic004G124500--Sobic004G236200 Sobic001G161700 Sobic001G161700 Sobic004G207900--Sobic001G161700 Sobic009G077600 Sobic009G077600 Sobic004G207900--Sobic009G077600 Sobic004G207900--Sobic004G100200 Sobic001G023100 Sobic001G023100 Sobic004G207900--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic004G207900--Sobic003G346400 Sobic004G025300 Sobic004G025300 Sobic004G207900--Sobic004G025300 Sobic002G141700 Sobic002G141700 Sobic004G207900--Sobic002G141700 Sobic008G129600 Sobic008G129600 Sobic004G207900--Sobic008G129600 Sobic002G294100 Sobic002G294100 Sobic004G207900--Sobic002G294100 Sobic001G465400 Sobic001G465400 Sobic001G378200--Sobic001G465400 Sobic001G112400 Sobic001G112400 Sobic001G378200--Sobic001G112400 Sobic006G012700 Sobic006G012700 Sobic001G378200--Sobic006G012700 Sobic004G078700 Sobic004G078700 Sobic001G378200--Sobic004G078700 Sobic004G039400 Sobic004G039400 Sobic001G378200--Sobic004G039400 Sobic001G443200 Sobic001G443200 Sobic001G378200--Sobic001G443200 Sobic001G008100 Sobic001G008100 Sobic001G378200--Sobic001G008100 Sobic002G262200 Sobic002G262200 Sobic001G378200--Sobic002G262200 Sobic001G378200--Sobic005G207400 Sobic006G207900--Sobic006G217300 Sobic009G169400 Sobic009G169400 Sobic006G207900--Sobic009G169400 Sobic003G272400 Sobic003G272400 Sobic006G207900--Sobic003G272400 Sobic006G207900--Sobic003G043800 Sobic003G126300 Sobic003G126300 Sobic006G207900--Sobic003G126300 Sobic006G207900--Sobic001G312500 Sobic006G207900--Sobic004G207900 Sobic006G207900--Sobic001G122500 Sobic006G207900--Sobic004G124500 Sobic006G148200 Sobic006G148200 Sobic006G055400--Sobic006G148200 Sobic004G274400 Sobic004G274400 Sobic006G055400--Sobic004G274400 Sobic006G055400--Sobic003G043800 Sobic006G225600 Sobic006G225600 Sobic006G055400--Sobic006G225600 Sobic009G059700 Sobic009G059700 Sobic006G055400--Sobic009G059700 Sobic001G413200 Sobic001G413200 Sobic006G055400--Sobic001G413200 Sobic009G257200 Sobic009G257200 Sobic006G055400--Sobic009G257200 Sobic001G127000 Sobic001G127000 Sobic006G055400--Sobic001G127000 Sobic002G131900 Sobic002G131900 Sobic006G055400--Sobic002G131900 Sobic005G207400--Sobic001G378200 Sobic005G207400--Sobic004G025300 Sobic005G207400--Sobic004G078700 Sobic001G261432 Sobic001G261432 Sobic005G207400--Sobic001G261432 Sobic001G332300 Sobic001G332300 Sobic005G207400--Sobic001G332300 Sobic007G077532 Sobic007G077532 Sobic005G207400--Sobic007G077532 Sobic005G207400--Sobic001G312500 Sobic005G207400--Sobic001G127000 Sobic003G202600 Sobic003G202600 Sobic005G207400--Sobic003G202600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.