Gene annotation
Transcriptome id Sobic.001G284400.1
Synonym Sb01g027940
Functional annotation jmjC domain containing protein, expressed
UniProt A0A1Z5S895
Pfam PF02373 PF02375 PF02928
Panther DB PTHR10694:SF33 PTHR10694
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G46910 : Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
RAP-DB (Rice) LOC_Os10g42690.1 : jmjC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a003534 , Zm00025a018078
Brachypodium KQJ97939 , KQJ97942 , KQJ97941 , KQJ97940
Barley HORVU6Hr1G067480.19 , HORVU6Hr1G067480.18 , HORVU6Hr1G067480.13 , HORVU6Hr1G067480.12 , HORVU6Hr1G067480.11 , HORVU6Hr1G067480.10 , HORVU6Hr1G067480.17 , HORVU6Hr1G067480.16 , HORVU6Hr1G067480.15 , HORVU6Hr1G067480.30 , HORVU6Hr1G067480.22 , HORVU6Hr1G067480.23 , HORVU6Hr1G067480.20 , HORVU6Hr1G067480.21 , HORVU6Hr1G067480.26 , HORVU6Hr1G067480.27 , HORVU6Hr1G067480.24 , HORVU6Hr1G067480.25 , HORVU6Hr1G067480.29 , HORVU6Hr1G067480.9 , HORVU6Hr1G067480.8 , HORVU6Hr1G067480.3 , HORVU6Hr1G067480.1 , HORVU6Hr1G067480.7 , HORVU6Hr1G067480.6 , HORVU6Hr1G067480.5 , HORVU6Hr1G067480.4
Wheat TraesCS6B02G293600 , TraesCS6B02G293600 , TraesCS6A02G266300 , TraesCS6A02G266300 , TraesCS6A02G266300 , TraesCS1B02G210400 , TraesCS1D02G199000 , TraesCS1A02G195700 , TraesCS6D02G248400 , TraesCS6D02G248400 , TraesCS6D02G248400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G373600 von Willebrand factor type A domain containing protein, expressed -
2 Sobic.001G284425 - -
3 Sobic.008G129000 phosphatidic acid phosphatase-related, putative, expressed -
4 Sobic.010G076700 expressed protein -
5 Sobic.003G385000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein kinase, putative, expressed -
6 Sobic.010G252900 methyl-binding domain protein MBD, putative, expressed -
7 Sobic.005G044300 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
8 Sobic.006G263100 expressed protein -
9 Sobic.001G409900 transporter, putative, expressed -
10 Sobic.006G230400 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
11 Sobic.010G266800 DUF803 domain containing, putative, expressed -
12 Sobic.002G362000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@vesicle transport protein GOT1B, putative, expressed -
13 Sobic.009G208800 hydrolase, acting on carbon-nitrogen, putative, expressed -
14 Sobic.010G201388 - -
15 Sobic.003G043800 BT1 family protein, putative, expressed -
16 Sobic.007G070500 OsFBL41 - F-box domain and LRR containing protein, expressed -
17 Sobic.001G499600 thioredoxin, putative, expressed -
18 Sobic.004G278000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
19 Sobic.003G253500 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
20 Sobic.009G179600 expressed protein -


Gene co-expression network
sample Sobic001G284400 Sobic001G284400 Sobic002G373600 Sobic002G373600 Sobic001G284400--Sobic002G373600 Sobic001G284425 Sobic001G284425 Sobic001G284400--Sobic001G284425 Sobic008G129000 Sobic008G129000 Sobic001G284400--Sobic008G129000 Sobic010G076700 Sobic010G076700 Sobic001G284400--Sobic010G076700 Sobic003G385000 Sobic003G385000 Sobic001G284400--Sobic003G385000 Sobic010G252900 Sobic010G252900 Sobic001G284400--Sobic010G252900 Sobic005G044300 Sobic005G044300 Sobic001G284400--Sobic005G044300 Sobic006G263100 Sobic006G263100 Sobic001G284400--Sobic006G263100 Sobic001G409900 Sobic001G409900 Sobic001G284400--Sobic001G409900 Sobic002G373600--Sobic001G284400 Sobic002G373600--Sobic001G284425 Sobic002G373600--Sobic003G385000 Sobic006G199700 Sobic006G199700 Sobic002G373600--Sobic006G199700 Sobic002G373600--Sobic010G252900 Sobic003G435400 Sobic003G435400 Sobic002G373600--Sobic003G435400 Sobic010G134700 Sobic010G134700 Sobic002G373600--Sobic010G134700 Sobic010G220400 Sobic010G220400 Sobic002G373600--Sobic010G220400 Sobic003G327600 Sobic003G327600 Sobic002G373600--Sobic003G327600 Sobic001G284425--Sobic003G385000 Sobic001G284425--Sobic001G284400 Sobic001G284425--Sobic002G373600 Sobic001G284425--Sobic006G199700 Sobic006G069200 Sobic006G069200 Sobic001G284425--Sobic006G069200 Sobic001G284425--Sobic010G076700 Sobic003G223800 Sobic003G223800 Sobic001G284425--Sobic003G223800 Sobic001G075800 Sobic001G075800 Sobic001G284425--Sobic001G075800 Sobic001G284425--Sobic010G134700 Sobic001G308700 Sobic001G308700 Sobic008G129000--Sobic001G308700 Sobic008G129000--Sobic001G284400 Sobic001G513300 Sobic001G513300 Sobic008G129000--Sobic001G513300 Sobic004G278000 Sobic004G278000 Sobic008G129000--Sobic004G278000 Sobic002G183400 Sobic002G183400 Sobic008G129000--Sobic002G183400 Sobic006G230400 Sobic006G230400 Sobic008G129000--Sobic006G230400 Sobic004G268200 Sobic004G268200 Sobic008G129000--Sobic004G268200 Sobic004G228700 Sobic004G228700 Sobic008G129000--Sobic004G228700 Sobic003G273000 Sobic003G273000 Sobic008G129000--Sobic003G273000 Sobic009G071800 Sobic009G071800 Sobic010G076700--Sobic009G071800 Sobic002G203000 Sobic002G203000 Sobic010G076700--Sobic002G203000 Sobic009G231400 Sobic009G231400 Sobic010G076700--Sobic009G231400 Sobic006G095600 Sobic006G095600 Sobic010G076700--Sobic006G095600 Sobic001G077700 Sobic001G077700 Sobic010G076700--Sobic001G077700 Sobic001G476400 Sobic001G476400 Sobic010G076700--Sobic001G476400 Sobic009G163900 Sobic009G163900 Sobic010G076700--Sobic009G163900 Sobic004G283300 Sobic004G283300 Sobic010G076700--Sobic004G283300 Sobic004G025000 Sobic004G025000 Sobic010G076700--Sobic004G025000 Sobic003G385000--Sobic010G134700 Sobic004G098800 Sobic004G098800 Sobic003G385000--Sobic004G098800 Sobic003G385000--Sobic001G284425 Sobic008G041450 Sobic008G041450 Sobic003G385000--Sobic008G041450 Sobic003G385000--Sobic002G373600 Sobic003G385000--Sobic001G284400 Sobic007G070500 Sobic007G070500 Sobic003G385000--Sobic007G070500 Sobic003G385000--Sobic003G223800 Sobic004G178700 Sobic004G178700 Sobic003G385000--Sobic004G178700 Sobic010G252900--Sobic001G284400 Sobic010G252900--Sobic002G373600 Sobic010G252900--Sobic001G284425 Sobic003G144200 Sobic003G144200 Sobic010G252900--Sobic003G144200 Sobic010G252900--Sobic006G199700 Sobic010G252900--Sobic003G435400 Sobic004G040800 Sobic004G040800 Sobic010G252900--Sobic004G040800 Sobic010G075000 Sobic010G075000 Sobic010G252900--Sobic010G075000 Sobic003G424300 Sobic003G424300 Sobic010G252900--Sobic003G424300 Sobic008G018300 Sobic008G018300 Sobic005G044300--Sobic008G018300 Sobic004G159000 Sobic004G159000 Sobic005G044300--Sobic004G159000 Sobic001G387200 Sobic001G387200 Sobic005G044300--Sobic001G387200 Sobic004G039400 Sobic004G039400 Sobic005G044300--Sobic004G039400 Sobic002G420600 Sobic002G420600 Sobic005G044300--Sobic002G420600 Sobic004G353500 Sobic004G353500 Sobic005G044300--Sobic004G353500 Sobic003G335300 Sobic003G335300 Sobic005G044300--Sobic003G335300 Sobic003G016300 Sobic003G016300 Sobic005G044300--Sobic003G016300 Sobic001G038000 Sobic001G038000 Sobic005G044300--Sobic001G038000 Sobic004G280800 Sobic004G280800 Sobic006G263100--Sobic004G280800 Sobic010G246000 Sobic010G246000 Sobic006G263100--Sobic010G246000 Sobic001G290400 Sobic001G290400 Sobic006G263100--Sobic001G290400 Sobic002G379400 Sobic002G379400 Sobic006G263100--Sobic002G379400 Sobic002G330300 Sobic002G330300 Sobic006G263100--Sobic002G330300 Sobic001G147200 Sobic001G147200 Sobic006G263100--Sobic001G147200 Sobic002G294700 Sobic002G294700 Sobic006G263100--Sobic002G294700 Sobic010G228000 Sobic010G228000 Sobic006G263100--Sobic010G228000 Sobic006G263100--Sobic001G409900 Sobic002G214900 Sobic002G214900 Sobic001G409900--Sobic002G214900 Sobic001G409900--Sobic006G263100 Sobic001G173300 Sobic001G173300 Sobic001G409900--Sobic001G173300 Sobic001G409900--Sobic004G278000 Sobic009G208800 Sobic009G208800 Sobic001G409900--Sobic009G208800 Sobic002G362900 Sobic002G362900 Sobic001G409900--Sobic002G362900 Sobic007G188100 Sobic007G188100 Sobic001G409900--Sobic007G188100 Sobic001G122500 Sobic001G122500 Sobic001G409900--Sobic001G122500 Sobic003G023500 Sobic003G023500 Sobic001G409900--Sobic003G023500
Octagon: transcription factors


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