Gene annotation
Transcriptome id Sobic.001G409900.1
Synonym Sb01g038730
Functional annotation transporter, putative, expressed
UniProt A0A1B6QNZ6
Pfam PF08449
Panther DB PTHR11132 PTHR11132:SF104
NCBI CDD KOG1441; Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11320 : Nucleotide-sugar transporter family protein
RAP-DB (Rice) LOC_Os03g17740.1 : transporter, putative, expressed
MaizeGDB (Corn) Zm00025a001944 , Zm00025a052696
Brachypodium KQK22197
Barley HORVU4Hr1G057100.3 , HORVU4Hr1G057100.2 , HORVU4Hr1G057100.7 , HORVU4Hr1G057100.6 , HORVU4Hr1G057100.5 , HORVU4Hr1G057100.4 , HORVU4Hr1G057100.8
Wheat TraesCS1A02G058700 , TraesCS1B02G077000 , TraesCS1D02G059800 , TraesCS4A02G106700 , TraesCS4B02G197600 , TraesCS4D02G198100
Populus -


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cDNA sequences
Sobic.001G409900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G214900 polygalacturonase, putative, expressed -
2 Sobic.006G263100 expressed protein -
3 Sobic.001G173300 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
4 Sobic.004G278000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
5 Sobic.009G208800 hydrolase, acting on carbon-nitrogen, putative, expressed -
6 Sobic.002G362900 IBS1, putative, expressed -
7 Sobic.007G188100 Candidate orthologue to the wheat Pm40 gene(PubMedID : 27755575)@protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
8 Sobic.001G122500 SNARE associated Golgi protein, putative, expressed -
9 Sobic.003G023500 syntaxin, putative, expressed K08489: syntaxin 16
10 Sobic.001G416600 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
11 Sobic.003G217100 Yip1 domain containing protein, expressed -
12 Sobic.004G222600 expressed protein -
13 Sobic.009G220200 exostosin family domain containing protein, expressed -
14 Sobic.001G214200 lysM domain containing protein, putative, expressed -
15 Sobic.008G016900 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
16 Sobic.001G051800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBDUF18 - F-box and DUF domain containing protein, expressed -
17 Sobic.007G035700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
18 Sobic.001G007600 GTPase-activating protein, putative, expressed K12493: ADP-ribosylation factor GTPase-activating protein 2/3
19 Sobic.001G441000 erwinia induced protein 2, putative, expressed -
20 Sobic.004G262300 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)


Gene co-expression network
sample Sobic001G409900 Sobic001G409900 Sobic002G214900 Sobic002G214900 Sobic001G409900--Sobic002G214900 Sobic006G263100 Sobic006G263100 Sobic001G409900--Sobic006G263100 Sobic001G173300 Sobic001G173300 Sobic001G409900--Sobic001G173300 Sobic004G278000 Sobic004G278000 Sobic001G409900--Sobic004G278000 Sobic009G208800 Sobic009G208800 Sobic001G409900--Sobic009G208800 Sobic002G362900 Sobic002G362900 Sobic001G409900--Sobic002G362900 Sobic007G188100 Sobic007G188100 Sobic001G409900--Sobic007G188100 Sobic001G122500 Sobic001G122500 Sobic001G409900--Sobic001G122500 Sobic003G023500 Sobic003G023500 Sobic001G409900--Sobic003G023500 Sobic007G114200 Sobic007G114200 Sobic002G214900--Sobic007G114200 Sobic006G182100 Sobic006G182100 Sobic002G214900--Sobic006G182100 Sobic002G214900--Sobic001G409900 Sobic003G368500 Sobic003G368500 Sobic002G214900--Sobic003G368500 Sobic007G115100 Sobic007G115100 Sobic002G214900--Sobic007G115100 Sobic001G403700 Sobic001G403700 Sobic002G214900--Sobic001G403700 Sobic001G224400 Sobic001G224400 Sobic002G214900--Sobic001G224400 Sobic007G195701 Sobic007G195701 Sobic002G214900--Sobic007G195701 Sobic003G362400 Sobic003G362400 Sobic002G214900--Sobic003G362400 Sobic004G280800 Sobic004G280800 Sobic006G263100--Sobic004G280800 Sobic010G246000 Sobic010G246000 Sobic006G263100--Sobic010G246000 Sobic001G290400 Sobic001G290400 Sobic006G263100--Sobic001G290400 Sobic002G379400 Sobic002G379400 Sobic006G263100--Sobic002G379400 Sobic002G330300 Sobic002G330300 Sobic006G263100--Sobic002G330300 Sobic001G147200 Sobic001G147200 Sobic006G263100--Sobic001G147200 Sobic002G294700 Sobic002G294700 Sobic006G263100--Sobic002G294700 Sobic010G228000 Sobic010G228000 Sobic006G263100--Sobic010G228000 Sobic006G263100--Sobic001G409900 Sobic001G516600 Sobic001G516600 Sobic001G173300--Sobic001G516600 Sobic004G257300 Sobic004G257300 Sobic001G173300--Sobic004G257300 Sobic004G036600 Sobic004G036600 Sobic001G173300--Sobic004G036600 Sobic001G173300--Sobic009G208800 Sobic001G084100 Sobic001G084100 Sobic001G173300--Sobic001G084100 Sobic010G065900 Sobic010G065900 Sobic001G173300--Sobic010G065900 Sobic007G151100 Sobic007G151100 Sobic001G173300--Sobic007G151100 Sobic009G027900 Sobic009G027900 Sobic001G173300--Sobic009G027900 Sobic005G168100 Sobic005G168100 Sobic001G173300--Sobic005G168100 Sobic004G278000--Sobic001G409900 Sobic004G278000--Sobic006G263100 Sobic002G118600 Sobic002G118600 Sobic004G278000--Sobic002G118600 Sobic008G129000 Sobic008G129000 Sobic004G278000--Sobic008G129000 Sobic004G259500 Sobic004G259500 Sobic004G278000--Sobic004G259500 Sobic009G171100 Sobic009G171100 Sobic004G278000--Sobic009G171100 Sobic004G278000--Sobic004G280800 Sobic003G425200 Sobic003G425200 Sobic004G278000--Sobic003G425200 Sobic003G392200 Sobic003G392200 Sobic004G278000--Sobic003G392200 Sobic009G208800--Sobic001G173300 Sobic009G208800--Sobic004G257300 Sobic009G220200 Sobic009G220200 Sobic009G208800--Sobic009G220200 Sobic003G296700 Sobic003G296700 Sobic009G208800--Sobic003G296700 Sobic009G208800--Sobic001G516600 Sobic007G057100 Sobic007G057100 Sobic009G208800--Sobic007G057100 Sobic009G208800--Sobic002G294700 Sobic005G231700 Sobic005G231700 Sobic009G208800--Sobic005G231700 Sobic008G177800 Sobic008G177800 Sobic009G208800--Sobic008G177800 Sobic002G362900--Sobic007G188100 Sobic006G087900 Sobic006G087900 Sobic002G362900--Sobic006G087900 Sobic002G362900--Sobic009G220200 Sobic002G362900--Sobic009G208800 Sobic004G145200 Sobic004G145200 Sobic002G362900--Sobic004G145200 Sobic002G362900--Sobic005G231700 Sobic008G016900 Sobic008G016900 Sobic002G362900--Sobic008G016900 Sobic002G362900--Sobic010G228000 Sobic002G362900--Sobic001G409900 Sobic007G188100--Sobic010G228000 Sobic007G188100--Sobic002G362900 Sobic002G353400 Sobic002G353400 Sobic007G188100--Sobic002G353400 Sobic002G374100 Sobic002G374100 Sobic007G188100--Sobic002G374100 Sobic007G188100--Sobic004G259500 Sobic007G188100--Sobic008G016900 Sobic007G188100--Sobic002G330300 Sobic010G062800 Sobic010G062800 Sobic007G188100--Sobic010G062800 Sobic007G188100--Sobic002G118600 Sobic006G217300 Sobic006G217300 Sobic001G122500--Sobic006G217300 Sobic001G214200 Sobic001G214200 Sobic001G122500--Sobic001G214200 Sobic004G350300 Sobic004G350300 Sobic001G122500--Sobic004G350300 Sobic001G122500--Sobic006G263100 Sobic010G188100 Sobic010G188100 Sobic001G122500--Sobic010G188100 Sobic003G002400 Sobic003G002400 Sobic001G122500--Sobic003G002400 Sobic010G026700 Sobic010G026700 Sobic001G122500--Sobic010G026700 Sobic001G122500--Sobic001G409900 Sobic001G122500--Sobic002G214900 Sobic004G222600 Sobic004G222600 Sobic003G023500--Sobic004G222600 Sobic003G217100 Sobic003G217100 Sobic003G023500--Sobic003G217100 Sobic003G023500--Sobic002G214900 Sobic003G023500--Sobic001G214200 Sobic003G023500--Sobic001G409900 Sobic009G191600 Sobic009G191600 Sobic003G023500--Sobic009G191600 Sobic006G222400 Sobic006G222400 Sobic003G023500--Sobic006G222400 Sobic004G054300 Sobic004G054300 Sobic003G023500--Sobic004G054300 Sobic002G376500 Sobic002G376500 Sobic003G023500--Sobic002G376500
Octagon: transcription factors


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