Gene annotation
Transcriptome id Sobic.007G188100.1
Synonym CERK1, LYSMRLK1, Sb07g025790
Functional annotation Candidate orthologue to the wheat Pm40 gene (PubMedID : 27755575)
protein kinase domain containing protein, expressed
UniProt A0A1Z5RAM1
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF12
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K13429; chitin elicitor receptor kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G21630 : chitin elicitor receptor kinase 1
RAP-DB (Rice) LOC_Os08g42580.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005321
Brachypodium KQJ99176 , KQJ99177 , KQJ99178
Barley HORVU6Hr1G094790.17 , HORVU6Hr1G094790.20 , HORVU6Hr1G094790.11 , HORVU6Hr1G094790.10 , HORVU6Hr1G094790.13 , HORVU6Hr1G094790.12 , HORVU6Hr1G094790.15 , HORVU6Hr1G094790.14 , HORVU6Hr1G094790.16 , HORVU6Hr1G094790.19 , HORVU6Hr1G094790.18 , HORVU6Hr1G094790.21 , HORVU6Hr1G094790.5 , HORVU6Hr1G094790.4 , HORVU6Hr1G094790.7 , HORVU6Hr1G094790.6 , HORVU6Hr1G094790.1 , HORVU6Hr1G094790.3 , HORVU6Hr1G094790.2 , HORVU6Hr1G094790.9 , HORVU6Hr1G094790.8
Wheat TraesCS6A02G417900 , TraesCS7A02G264400 , TraesCS7A02G264400 , TraesCS6B02G471400 , TraesCS6B02G471100 , TraesCS6D02G403200 , TraesCS7D02G265400 , TraesCS7B02G162500 , TraesCS7B02G162500 , TraesCS7B02G162500 , TraesCS7B02G162500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G228000 Protein kinase domain containing protein, expressed -
2 Sobic.002G362900 IBS1, putative, expressed -
3 Sobic.002G353400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
4 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
5 Sobic.004G259500 expressed protein -
6 Sobic.008G016900 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
7 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
8 Sobic.010G062800 transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
9 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
10 Sobic.001G525400 receptor-like protein kinase At3g46290 precursor, putative, expressed -
11 Sobic.002G343500 CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
12 Sobic.009G220200 exostosin family domain containing protein, expressed -
13 Sobic.003G296700 protein kinase domain containing protein, expressed -
14 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
15 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
16 Sobic.006G263100 expressed protein -
17 Sobic.004G257300 GPI-anchored protein, putative, expressed -
18 Sobic.010G246000 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
20 Sobic.010G041700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic007G188100 Sobic007G188100 Sobic010G228000 Sobic010G228000 Sobic007G188100--Sobic010G228000 Sobic002G362900 Sobic002G362900 Sobic007G188100--Sobic002G362900 Sobic002G353400 Sobic002G353400 Sobic007G188100--Sobic002G353400 Sobic002G374100 Sobic002G374100 Sobic007G188100--Sobic002G374100 Sobic004G259500 Sobic004G259500 Sobic007G188100--Sobic004G259500 Sobic008G016900 Sobic008G016900 Sobic007G188100--Sobic008G016900 Sobic002G330300 Sobic002G330300 Sobic007G188100--Sobic002G330300 Sobic010G062800 Sobic010G062800 Sobic007G188100--Sobic010G062800 Sobic002G118600 Sobic002G118600 Sobic007G188100--Sobic002G118600 Sobic010G228000--Sobic002G374100 Sobic010G228000--Sobic002G118600 Sobic010G228000--Sobic007G188100 Sobic002G294700 Sobic002G294700 Sobic010G228000--Sobic002G294700 Sobic010G228000--Sobic002G330300 Sobic004G280800 Sobic004G280800 Sobic010G228000--Sobic004G280800 Sobic010G246000 Sobic010G246000 Sobic010G228000--Sobic010G246000 Sobic002G379400 Sobic002G379400 Sobic010G228000--Sobic002G379400 Sobic001G290400 Sobic001G290400 Sobic010G228000--Sobic001G290400 Sobic002G362900--Sobic007G188100 Sobic006G087900 Sobic006G087900 Sobic002G362900--Sobic006G087900 Sobic009G220200 Sobic009G220200 Sobic002G362900--Sobic009G220200 Sobic009G208800 Sobic009G208800 Sobic002G362900--Sobic009G208800 Sobic004G145200 Sobic004G145200 Sobic002G362900--Sobic004G145200 Sobic005G231700 Sobic005G231700 Sobic002G362900--Sobic005G231700 Sobic002G362900--Sobic008G016900 Sobic002G362900--Sobic010G228000 Sobic001G409900 Sobic001G409900 Sobic002G362900--Sobic001G409900 Sobic002G353400--Sobic002G374100 Sobic002G343500 Sobic002G343500 Sobic002G353400--Sobic002G343500 Sobic002G353400--Sobic007G188100 Sobic001G341600 Sobic001G341600 Sobic002G353400--Sobic001G341600 Sobic001G516600 Sobic001G516600 Sobic002G353400--Sobic001G516600 Sobic009G217600 Sobic009G217600 Sobic002G353400--Sobic009G217600 Sobic001G525400 Sobic001G525400 Sobic002G353400--Sobic001G525400 Sobic002G353400--Sobic002G294700 Sobic009G027900 Sobic009G027900 Sobic002G353400--Sobic009G027900 Sobic002G374100--Sobic002G294700 Sobic002G374100--Sobic010G246000 Sobic002G374100--Sobic001G516600 Sobic002G354900 Sobic002G354900 Sobic002G374100--Sobic002G354900 Sobic002G374100--Sobic010G228000 Sobic004G036600 Sobic004G036600 Sobic002G374100--Sobic004G036600 Sobic002G374100--Sobic002G353400 Sobic008G177800 Sobic008G177800 Sobic002G374100--Sobic008G177800 Sobic002G374100--Sobic002G118600 Sobic004G259500--Sobic007G188100 Sobic009G171100 Sobic009G171100 Sobic004G259500--Sobic009G171100 Sobic004G259500--Sobic002G353400 Sobic003G425200 Sobic003G425200 Sobic004G259500--Sobic003G425200 Sobic003G294400 Sobic003G294400 Sobic004G259500--Sobic003G294400 Sobic004G259500--Sobic001G525400 Sobic004G259500--Sobic002G379400 Sobic004G259500--Sobic008G016900 Sobic004G278000 Sobic004G278000 Sobic004G259500--Sobic004G278000 Sobic008G016900--Sobic002G330300 Sobic008G016900--Sobic002G379400 Sobic008G016900--Sobic010G062800 Sobic001G283500 Sobic001G283500 Sobic008G016900--Sobic001G283500 Sobic008G016900--Sobic007G188100 Sobic008G016900--Sobic004G145200 Sobic001G162100 Sobic001G162100 Sobic008G016900--Sobic001G162100 Sobic009G059700 Sobic009G059700 Sobic008G016900--Sobic009G059700 Sobic008G016900--Sobic002G343500 Sobic002G330300--Sobic008G016900 Sobic002G330300--Sobic002G379400 Sobic010G052800 Sobic010G052800 Sobic002G330300--Sobic010G052800 Sobic002G330300--Sobic010G228000 Sobic007G011000 Sobic007G011000 Sobic002G330300--Sobic007G011000 Sobic004G025000 Sobic004G025000 Sobic002G330300--Sobic004G025000 Sobic002G330300--Sobic002G118600 Sobic006G263100 Sobic006G263100 Sobic002G330300--Sobic006G263100 Sobic002G330300--Sobic007G188100 Sobic010G062800--Sobic008G016900 Sobic010G062800--Sobic007G188100 Sobic001G403700 Sobic001G403700 Sobic010G062800--Sobic001G403700 Sobic006G192500 Sobic006G192500 Sobic010G062800--Sobic006G192500 Sobic010G062800--Sobic010G228000 Sobic010G062800--Sobic001G283500 Sobic002G214900 Sobic002G214900 Sobic010G062800--Sobic002G214900 Sobic010G062800--Sobic004G145200 Sobic006G182100 Sobic006G182100 Sobic010G062800--Sobic006G182100 Sobic001G147200 Sobic001G147200 Sobic002G118600--Sobic001G147200 Sobic002G118600--Sobic001G341600 Sobic003G341100 Sobic003G341100 Sobic002G118600--Sobic003G341100 Sobic002G118600--Sobic010G228000 Sobic002G118600--Sobic002G374100 Sobic002G118600--Sobic001G290400 Sobic002G118600--Sobic007G011000 Sobic001G538866 Sobic001G538866 Sobic002G118600--Sobic001G538866 Sobic006G228300 Sobic006G228300 Sobic002G118600--Sobic006G228300
Octagon: transcription factors


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