Gene annotation
Transcriptome id Sobic.001G525400.1
Synonym Sb01g048910
Functional annotation receptor-like protein kinase At3g46290 precursor, putative, expressed
UniProt C5X025
Pfam PF11721
Panther DB PTHR34590 PTHR34590:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G00300 : fringe-related protein
RAP-DB (Rice) LOC_Os03g03290.1 : receptor-like protein kinase At3g46290 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a000328
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G525400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G171100 prenylated rab acceptor, putative, expressed -
2 Sobic.003G253500 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
3 Sobic.002G353400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
4 Sobic.007G188100 Candidate orthologue to the wheat Pm40 gene(PubMedID : 27755575)@protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
5 Sobic.001G370600 expressed protein -
6 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
7 Sobic.007G011000 synaptobrevin-related family protein, putative, expressed -
8 Sobic.003G338900 expressed protein -
9 Sobic.003G392200 CXE carboxylesterase, putative, expressed -
10 Sobic.008G016900 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
11 Sobic.004G257300 GPI-anchored protein, putative, expressed -
12 Sobic.002G270700 OsRhmbd16 - Putative Rhomboid homologue, expressed -
13 Sobic.004G280800 Tannin1 encodes a WD40 protein homologous to the Arabidopsis proanthocyanidin regulator transparent testa glabra1 (TTG1). (PubmedID : 25272193)@WD40 protein(PubMedID : 22699509)@Transcription factor for tannin accumulation in seed(PubMedID : 22699509)@WD domain, G-beta repeat domain containing protein, expressed K11805: DCAF7, DDB1- and CUL4-associated factor 7
14 Sobic.004G259500 expressed protein -
15 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.006G263100 expressed protein -
17 Sobic.001G324900 proline-rich family protein, putative, expressed -
18 Sobic.004G026200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.002G354900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@gibberellin response modulator protein, putative, expressed -
20 Sobic.003G416500 SRC2 protein, putative, expressed -


Gene co-expression network
sample Sobic001G525400 Sobic001G525400 Sobic009G171100 Sobic009G171100 Sobic001G525400--Sobic009G171100 Sobic003G253500 Sobic003G253500 Sobic001G525400--Sobic003G253500 Sobic002G353400 Sobic002G353400 Sobic001G525400--Sobic002G353400 Sobic007G188100 Sobic007G188100 Sobic001G525400--Sobic007G188100 Sobic001G370600 Sobic001G370600 Sobic001G525400--Sobic001G370600 Sobic002G330300 Sobic002G330300 Sobic001G525400--Sobic002G330300 Sobic007G011000 Sobic007G011000 Sobic001G525400--Sobic007G011000 Sobic003G338900 Sobic003G338900 Sobic001G525400--Sobic003G338900 Sobic003G392200 Sobic003G392200 Sobic001G525400--Sobic003G392200 Sobic009G171100--Sobic001G525400 Sobic001G441000 Sobic001G441000 Sobic009G171100--Sobic001G441000 Sobic009G171100--Sobic003G253500 Sobic004G259500 Sobic004G259500 Sobic009G171100--Sobic004G259500 Sobic001G408100 Sobic001G408100 Sobic009G171100--Sobic001G408100 Sobic009G171100--Sobic007G188100 Sobic009G171100--Sobic002G353400 Sobic009G171100--Sobic003G392200 Sobic009G182200 Sobic009G182200 Sobic009G171100--Sobic009G182200 Sobic003G253500--Sobic001G525400 Sobic003G253500--Sobic009G171100 Sobic004G257300 Sobic004G257300 Sobic003G253500--Sobic004G257300 Sobic004G280800 Sobic004G280800 Sobic003G253500--Sobic004G280800 Sobic004G259600 Sobic004G259600 Sobic003G253500--Sobic004G259600 Sobic001G489600 Sobic001G489600 Sobic003G253500--Sobic001G489600 Sobic001G173300 Sobic001G173300 Sobic003G253500--Sobic001G173300 Sobic010G030900 Sobic010G030900 Sobic003G253500--Sobic010G030900 Sobic003G227200 Sobic003G227200 Sobic003G253500--Sobic003G227200 Sobic002G374100 Sobic002G374100 Sobic002G353400--Sobic002G374100 Sobic002G343500 Sobic002G343500 Sobic002G353400--Sobic002G343500 Sobic002G353400--Sobic007G188100 Sobic001G341600 Sobic001G341600 Sobic002G353400--Sobic001G341600 Sobic001G516600 Sobic001G516600 Sobic002G353400--Sobic001G516600 Sobic009G217600 Sobic009G217600 Sobic002G353400--Sobic009G217600 Sobic002G353400--Sobic001G525400 Sobic002G294700 Sobic002G294700 Sobic002G353400--Sobic002G294700 Sobic009G027900 Sobic009G027900 Sobic002G353400--Sobic009G027900 Sobic010G228000 Sobic010G228000 Sobic007G188100--Sobic010G228000 Sobic002G362900 Sobic002G362900 Sobic007G188100--Sobic002G362900 Sobic007G188100--Sobic002G353400 Sobic007G188100--Sobic002G374100 Sobic007G188100--Sobic004G259500 Sobic008G016900 Sobic008G016900 Sobic007G188100--Sobic008G016900 Sobic007G188100--Sobic002G330300 Sobic010G062800 Sobic010G062800 Sobic007G188100--Sobic010G062800 Sobic002G118600 Sobic002G118600 Sobic007G188100--Sobic002G118600 Sobic006G273800 Sobic006G273800 Sobic001G370600--Sobic006G273800 Sobic002G197600 Sobic002G197600 Sobic001G370600--Sobic002G197600 Sobic007G051800 Sobic007G051800 Sobic001G370600--Sobic007G051800 Sobic002G367900 Sobic002G367900 Sobic001G370600--Sobic002G367900 Sobic003G425200 Sobic003G425200 Sobic001G370600--Sobic003G425200 Sobic006G210300 Sobic006G210300 Sobic001G370600--Sobic006G210300 Sobic003G341100 Sobic003G341100 Sobic001G370600--Sobic003G341100 Sobic001G370600--Sobic007G011000 Sobic007G201100 Sobic007G201100 Sobic001G370600--Sobic007G201100 Sobic002G330300--Sobic008G016900 Sobic002G379400 Sobic002G379400 Sobic002G330300--Sobic002G379400 Sobic010G052800 Sobic010G052800 Sobic002G330300--Sobic010G052800 Sobic002G330300--Sobic010G228000 Sobic002G330300--Sobic007G011000 Sobic004G025000 Sobic004G025000 Sobic002G330300--Sobic004G025000 Sobic002G330300--Sobic002G118600 Sobic006G263100 Sobic006G263100 Sobic002G330300--Sobic006G263100 Sobic002G330300--Sobic007G188100 Sobic007G011000--Sobic002G118600 Sobic007G011000--Sobic002G330300 Sobic007G011000--Sobic010G228000 Sobic007G212200 Sobic007G212200 Sobic007G011000--Sobic007G212200 Sobic007G011000--Sobic004G280800 Sobic007G011000--Sobic003G425200 Sobic002G354900 Sobic002G354900 Sobic007G011000--Sobic002G354900 Sobic010G041700 Sobic010G041700 Sobic007G011000--Sobic010G041700 Sobic007G011000--Sobic004G025000 Sobic001G189700 Sobic001G189700 Sobic003G338900--Sobic001G189700 Sobic010G076600 Sobic010G076600 Sobic003G338900--Sobic010G076600 Sobic003G338900--Sobic009G217600 Sobic003G338900--Sobic002G379400 Sobic001G476400 Sobic001G476400 Sobic003G338900--Sobic001G476400 Sobic003G338900--Sobic001G341600 Sobic001G290400 Sobic001G290400 Sobic003G338900--Sobic001G290400 Sobic003G296700 Sobic003G296700 Sobic003G338900--Sobic003G296700 Sobic001G473900 Sobic001G473900 Sobic003G338900--Sobic001G473900 Sobic007G178200 Sobic007G178200 Sobic003G392200--Sobic007G178200 Sobic003G392200--Sobic007G188100 Sobic003G392200--Sobic001G525400 Sobic002G270700 Sobic002G270700 Sobic003G392200--Sobic002G270700 Sobic003G392200--Sobic002G197600 Sobic003G392200--Sobic009G171100 Sobic001G081600 Sobic001G081600 Sobic003G392200--Sobic001G081600 Sobic002G395600 Sobic002G395600 Sobic003G392200--Sobic002G395600 Sobic001G063600 Sobic001G063600 Sobic003G392200--Sobic001G063600
Octagon: transcription factors


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