Gene annotation
Transcriptome id Sobic.001G324900.1
Synonym Sb01g031480
Functional annotation proline-rich family protein, putative, expressed
UniProt C5WVH0
Pfam PF10225
Panther DB PTHR31587 PTHR31587:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G67610 : Uncharacterized conserved protein (DUF2215)
RAP-DB (Rice) LOC_Os03g31570.1 : proline-rich family protein, putative, expressed
MaizeGDB (Corn) Zm00025a003045 , Zm00025a053639
Brachypodium KQK14391 , KQK14392 , KQK14393
Barley HORVU1Hr1G080920.14 , HORVU1Hr1G080920.12 , HORVU1Hr1G080920.13 , HORVU1Hr1G080920.10 , HORVU1Hr1G080920.11 , HORVU1Hr1G080920.4 , HORVU1Hr1G080920.5 , HORVU1Hr1G080920.6 , HORVU1Hr1G080920.7 , HORVU1Hr1G080920.1 , HORVU1Hr1G080920.3 , HORVU1Hr1G080920.8 , HORVU1Hr1G080920.9
Wheat TraesCS1B02G367200 , TraesCS1D02G355900 , TraesCS1A02G354600 , TraesCS1A02G354600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G022400 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
2 Sobic.004G247200 erwinia induced protein 2, putative, expressed -
3 Sobic.001G525400 receptor-like protein kinase At3g46290 precursor, putative, expressed -
4 Sobic.002G280200 Skp1 family, dimerisation domain containing protein, expressed K03094: SKP1, S-phase kinase-associated protein 1
5 Sobic.008G161000 protein kinase domain containing protein, expressed -
6 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
7 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
8 Sobic.010G217900 diphthamide biosynthesis protein 3, putative, expressed K15455: DPH3, diphthamide biosynthesis protein 3
9 Sobic.010G204300 expressed protein -
10 Sobic.002G353400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
11 Sobic.010G180700 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
12 Sobic.005G111100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
13 Sobic.010G199100 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.010G257100 CGMC_MAPKCMGC_2.11 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
15 Sobic.001G389400 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
16 Sobic.009G217000 chaperone protein dnaJ 10, putative, expressed -
17 Sobic.009G171100 prenylated rab acceptor, putative, expressed -
18 Sobic.001G441000 erwinia induced protein 2, putative, expressed -
19 Sobic.001G422900 zinc finger family protein, putative, expressed -
20 Sobic.001G464900 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C


Gene co-expression network
sample Sobic001G324900 Sobic001G324900 Sobic002G022400 Sobic002G022400 Sobic001G324900--Sobic002G022400 Sobic004G247200 Sobic004G247200 Sobic001G324900--Sobic004G247200 Sobic001G525400 Sobic001G525400 Sobic001G324900--Sobic001G525400 Sobic002G280200 Sobic002G280200 Sobic001G324900--Sobic002G280200 Sobic008G161000 Sobic008G161000 Sobic001G324900--Sobic008G161000 Sobic003G249800 Sobic003G249800 Sobic001G324900--Sobic003G249800 Sobic006G062800 Sobic006G062800 Sobic001G324900--Sobic006G062800 Sobic010G217900 Sobic010G217900 Sobic001G324900--Sobic010G217900 Sobic010G204300 Sobic010G204300 Sobic001G324900--Sobic010G204300 Sobic002G022400--Sobic003G249800 Sobic002G330000 Sobic002G330000 Sobic002G022400--Sobic002G330000 Sobic002G022400--Sobic008G161000 Sobic005G092800 Sobic005G092800 Sobic002G022400--Sobic005G092800 Sobic003G321700 Sobic003G321700 Sobic002G022400--Sobic003G321700 Sobic004G152700 Sobic004G152700 Sobic002G022400--Sobic004G152700 Sobic010G204600 Sobic010G204600 Sobic002G022400--Sobic010G204600 Sobic001G422900 Sobic001G422900 Sobic002G022400--Sobic001G422900 Sobic005G157200 Sobic005G157200 Sobic002G022400--Sobic005G157200 Sobic003G063200 Sobic003G063200 Sobic004G247200--Sobic003G063200 Sobic005G028700 Sobic005G028700 Sobic004G247200--Sobic005G028700 Sobic004G259600 Sobic004G259600 Sobic004G247200--Sobic004G259600 Sobic001G055600 Sobic001G055600 Sobic004G247200--Sobic001G055600 Sobic004G247200--Sobic010G204600 Sobic004G065500 Sobic004G065500 Sobic004G247200--Sobic004G065500 Sobic009G183300 Sobic009G183300 Sobic004G247200--Sobic009G183300 Sobic001G067601 Sobic001G067601 Sobic004G247200--Sobic001G067601 Sobic002G348100 Sobic002G348100 Sobic004G247200--Sobic002G348100 Sobic009G171100 Sobic009G171100 Sobic001G525400--Sobic009G171100 Sobic003G253500 Sobic003G253500 Sobic001G525400--Sobic003G253500 Sobic002G353400 Sobic002G353400 Sobic001G525400--Sobic002G353400 Sobic007G188100 Sobic007G188100 Sobic001G525400--Sobic007G188100 Sobic001G370600 Sobic001G370600 Sobic001G525400--Sobic001G370600 Sobic002G330300 Sobic002G330300 Sobic001G525400--Sobic002G330300 Sobic007G011000 Sobic007G011000 Sobic001G525400--Sobic007G011000 Sobic003G338900 Sobic003G338900 Sobic001G525400--Sobic003G338900 Sobic003G392200 Sobic003G392200 Sobic001G525400--Sobic003G392200 Sobic002G280200--Sobic006G062800 Sobic010G213400 Sobic010G213400 Sobic002G280200--Sobic010G213400 Sobic002G116200 Sobic002G116200 Sobic002G280200--Sobic002G116200 Sobic005G111100 Sobic005G111100 Sobic002G280200--Sobic005G111100 Sobic003G362400 Sobic003G362400 Sobic002G280200--Sobic003G362400 Sobic010G150575 Sobic010G150575 Sobic002G280200--Sobic010G150575 Sobic003G018600 Sobic003G018600 Sobic002G280200--Sobic003G018600 Sobic001G066700 Sobic001G066700 Sobic002G280200--Sobic001G066700 Sobic006G131400 Sobic006G131400 Sobic002G280200--Sobic006G131400 Sobic008G161000--Sobic003G249800 Sobic009G033700 Sobic009G033700 Sobic008G161000--Sobic009G033700 Sobic009G152200 Sobic009G152200 Sobic008G161000--Sobic009G152200 Sobic001G037000 Sobic001G037000 Sobic008G161000--Sobic001G037000 Sobic009G129000 Sobic009G129000 Sobic008G161000--Sobic009G129000 Sobic009G016201 Sobic009G016201 Sobic008G161000--Sobic009G016201 Sobic008G161000--Sobic010G204300 Sobic008G161000--Sobic010G204600 Sobic008G161000--Sobic010G213400 Sobic003G249800--Sobic008G161000 Sobic003G249800--Sobic001G037000 Sobic003G249800--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic003G249800--Sobic002G046100 Sobic002G282400 Sobic002G282400 Sobic003G249800--Sobic002G282400 Sobic003G249800--Sobic002G330000 Sobic009G143400 Sobic009G143400 Sobic003G249800--Sobic009G143400 Sobic002G211900 Sobic002G211900 Sobic003G249800--Sobic002G211900 Sobic003G181500 Sobic003G181500 Sobic003G249800--Sobic003G181500 Sobic006G062800--Sobic010G213400 Sobic006G062800--Sobic003G249800 Sobic003G285800 Sobic003G285800 Sobic006G062800--Sobic003G285800 Sobic007G059900 Sobic007G059900 Sobic006G062800--Sobic007G059900 Sobic006G062800--Sobic009G129000 Sobic002G218000 Sobic002G218000 Sobic006G062800--Sobic002G218000 Sobic002G202300 Sobic002G202300 Sobic006G062800--Sobic002G202300 Sobic006G062800--Sobic009G033700 Sobic002G261900 Sobic002G261900 Sobic006G062800--Sobic002G261900 Sobic010G217900--Sobic001G067601 Sobic001G019900 Sobic001G019900 Sobic010G217900--Sobic001G019900 Sobic005G228000 Sobic005G228000 Sobic010G217900--Sobic005G228000 Sobic001G533300 Sobic001G533300 Sobic010G217900--Sobic001G533300 Sobic010G217900--Sobic004G247200 Sobic010G217900--Sobic001G037000 Sobic003G162700 Sobic003G162700 Sobic010G217900--Sobic003G162700 Sobic004G177700 Sobic004G177700 Sobic010G217900--Sobic004G177700 Sobic010G217900--Sobic005G028700 Sobic010G204300--Sobic008G161000 Sobic003G115800 Sobic003G115800 Sobic010G204300--Sobic003G115800 Sobic010G204300--Sobic007G059900 Sobic001G147200 Sobic001G147200 Sobic010G204300--Sobic001G147200 Sobic002G296300 Sobic002G296300 Sobic010G204300--Sobic002G296300 Sobic010G204300--Sobic002G202300 Sobic010G204300--Sobic003G181500 Sobic010G204300--Sobic006G062800 Sobic010G246000 Sobic010G246000 Sobic010G204300--Sobic010G246000
Octagon: transcription factors


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