Gene annotation
Transcriptome id Sobic.001G389400.1
Synonym Sb01g036910, ATMAPR3, MAPR3, ATMP2, MSBP2
Functional annotation cytochrome b5-like Heme/Steroid binding domain containing protein, expressed
UniProt C5X1T3
Pfam PF00173
Panther DB PTHR10281 PTHR10281:SF40
NCBI CDD KOG1110; Putative steroid membrane receptor Hpr6.6/25-Dx
KEGG Orthology K17278; membrane-associated progesterone receptor component
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48890 : membrane-associated progesterone binding protein 3
RAP-DB (Rice) LOC_Os03g20470.1 : cytochrome b5-like Heme/Steroid binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002243
Brachypodium KQK21920
Barley HORVU4Hr1G052100.4 , HORVU4Hr1G052100.5 , HORVU4Hr1G052100.1 , HORVU4Hr1G052100.2 , HORVU4Hr1G052100.3
Wheat TraesCS4D02G178900 , TraesCS4A02G127500 , TraesCS4B02G177200 , TraesCS4D02G178900
Populus -


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cDNA sequences
Sobic.001G389400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
2 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
3 Sobic.007G190800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17780: mitochondrial import inner membrane translocase subunit TIM8
4 Sobic.002G022400 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
5 Sobic.010G257100 CGMC_MAPKCMGC_2.11 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
6 Sobic.004G152700 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
7 Sobic.003G321700 KH domain containing protein, putative, expressed K11884: PNO1, RNA-binding protein PNO1
8 Sobic.003G429000 NADPH quinone oxidoreductase, putative, expressed -
9 Sobic.010G230700 60S ribosomal protein L27-3, putative, expressed K02901: RP-L27e, large subunit ribosomal protein L27e
10 Sobic.003G344600 BAG domain containing protein, expressed -
11 Sobic.010G029400 peptidase, T1 family, putative, expressed K02738: 20S proteasome subunit beta 1
12 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
13 Sobic.001G037000 PHD finger protein, putative, expressed -
14 Sobic.004G069200 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
15 Sobic.002G330000 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
16 Sobic.008G161000 protein kinase domain containing protein, expressed -
17 Sobic.010G106200 signal recognition particle 9 kDa protein, putative, expressed K03109: signal recognition particle subunit SRP9
18 Sobic.001G377800 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
19 Sobic.007G018300 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1
20 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G389400 Sobic001G389400 Sobic003G249800 Sobic003G249800 Sobic001G389400--Sobic003G249800 Sobic002G068300 Sobic002G068300 Sobic001G389400--Sobic002G068300 Sobic007G190800 Sobic007G190800 Sobic001G389400--Sobic007G190800 Sobic002G022400 Sobic002G022400 Sobic001G389400--Sobic002G022400 Sobic010G257100 Sobic010G257100 Sobic001G389400--Sobic010G257100 Sobic004G152700 Sobic004G152700 Sobic001G389400--Sobic004G152700 Sobic003G321700 Sobic003G321700 Sobic001G389400--Sobic003G321700 Sobic003G429000 Sobic003G429000 Sobic001G389400--Sobic003G429000 Sobic010G230700 Sobic010G230700 Sobic001G389400--Sobic010G230700 Sobic008G161000 Sobic008G161000 Sobic003G249800--Sobic008G161000 Sobic001G037000 Sobic001G037000 Sobic003G249800--Sobic001G037000 Sobic009G033700 Sobic009G033700 Sobic003G249800--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic003G249800--Sobic002G046100 Sobic002G282400 Sobic002G282400 Sobic003G249800--Sobic002G282400 Sobic002G330000 Sobic002G330000 Sobic003G249800--Sobic002G330000 Sobic009G143400 Sobic009G143400 Sobic003G249800--Sobic009G143400 Sobic002G211900 Sobic002G211900 Sobic003G249800--Sobic002G211900 Sobic003G181500 Sobic003G181500 Sobic003G249800--Sobic003G181500 Sobic009G036900 Sobic009G036900 Sobic002G068300--Sobic009G036900 Sobic010G228600 Sobic010G228600 Sobic002G068300--Sobic010G228600 Sobic009G016201 Sobic009G016201 Sobic002G068300--Sobic009G016201 Sobic006G256500 Sobic006G256500 Sobic002G068300--Sobic006G256500 Sobic010G144400 Sobic010G144400 Sobic002G068300--Sobic010G144400 Sobic002G068300--Sobic003G249800 Sobic002G068300--Sobic002G282400 Sobic002G068300--Sobic001G389400 Sobic002G205300 Sobic002G205300 Sobic002G068300--Sobic002G205300 Sobic007G190800--Sobic010G230700 Sobic005G019700 Sobic005G019700 Sobic007G190800--Sobic005G019700 Sobic004G104100 Sobic004G104100 Sobic007G190800--Sobic004G104100 Sobic009G050300 Sobic009G050300 Sobic007G190800--Sobic009G050300 Sobic004G104300 Sobic004G104300 Sobic007G190800--Sobic004G104300 Sobic007G019000 Sobic007G019000 Sobic007G190800--Sobic007G019000 Sobic007G018300 Sobic007G018300 Sobic007G190800--Sobic007G018300 Sobic007G212600 Sobic007G212600 Sobic007G190800--Sobic007G212600 Sobic001G403500 Sobic001G403500 Sobic007G190800--Sobic001G403500 Sobic002G022400--Sobic003G249800 Sobic002G022400--Sobic002G330000 Sobic002G022400--Sobic008G161000 Sobic005G092800 Sobic005G092800 Sobic002G022400--Sobic005G092800 Sobic002G022400--Sobic003G321700 Sobic002G022400--Sobic004G152700 Sobic010G204600 Sobic010G204600 Sobic002G022400--Sobic010G204600 Sobic001G422900 Sobic001G422900 Sobic002G022400--Sobic001G422900 Sobic005G157200 Sobic005G157200 Sobic002G022400--Sobic005G157200 Sobic001G019900 Sobic001G019900 Sobic010G257100--Sobic001G019900 Sobic001G084900 Sobic001G084900 Sobic010G257100--Sobic001G084900 Sobic010G257100--Sobic003G321700 Sobic010G257100--Sobic003G249800 Sobic010G257100--Sobic005G092800 Sobic010G243200 Sobic010G243200 Sobic010G257100--Sobic010G243200 Sobic004G026400 Sobic004G026400 Sobic010G257100--Sobic004G026400 Sobic010G153100 Sobic010G153100 Sobic010G257100--Sobic010G153100 Sobic003G072300 Sobic003G072300 Sobic010G257100--Sobic003G072300 Sobic004G103800 Sobic004G103800 Sobic004G152700--Sobic004G103800 Sobic002G259000 Sobic002G259000 Sobic004G152700--Sobic002G259000 Sobic004G152700--Sobic004G104100 Sobic004G152700--Sobic010G230700 Sobic010G182300 Sobic010G182300 Sobic004G152700--Sobic010G182300 Sobic006G221200 Sobic006G221200 Sobic004G152700--Sobic006G221200 Sobic004G152700--Sobic004G104300 Sobic004G145801 Sobic004G145801 Sobic004G152700--Sobic004G145801 Sobic010G259900 Sobic010G259900 Sobic004G152700--Sobic010G259900 Sobic003G321700--Sobic007G212600 Sobic010G260100 Sobic010G260100 Sobic003G321700--Sobic010G260100 Sobic001G091801 Sobic001G091801 Sobic003G321700--Sobic001G091801 Sobic003G321700--Sobic007G190800 Sobic003G322400 Sobic003G322400 Sobic003G321700--Sobic003G322400 Sobic003G321700--Sobic010G259900 Sobic003G321700--Sobic004G145801 Sobic006G147000 Sobic006G147000 Sobic003G321700--Sobic006G147000 Sobic003G321700--Sobic004G104100 Sobic003G037800 Sobic003G037800 Sobic003G429000--Sobic003G037800 Sobic005G018700 Sobic005G018700 Sobic003G429000--Sobic005G018700 Sobic001G050100 Sobic001G050100 Sobic003G429000--Sobic001G050100 Sobic001G389000 Sobic001G389000 Sobic003G429000--Sobic001G389000 Sobic002G329000 Sobic002G329000 Sobic003G429000--Sobic002G329000 Sobic002G245100 Sobic002G245100 Sobic003G429000--Sobic002G245100 Sobic009G159400 Sobic009G159400 Sobic003G429000--Sobic009G159400 Sobic007G184600 Sobic007G184600 Sobic003G429000--Sobic007G184600 Sobic002G175100 Sobic002G175100 Sobic003G429000--Sobic002G175100 Sobic010G230700--Sobic005G019700 Sobic010G230700--Sobic007G018300 Sobic010G230700--Sobic004G104100 Sobic009G054800 Sobic009G054800 Sobic010G230700--Sobic009G054800 Sobic010G230700--Sobic006G221200 Sobic010G230700--Sobic009G050300 Sobic010G230700--Sobic001G091801 Sobic010G230700--Sobic007G019000 Sobic002G372400 Sobic002G372400 Sobic010G230700--Sobic002G372400
Octagon: transcription factors


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