Gene annotation
Transcriptome id Sobic.004G069200.1
Synonym Sb04g005810
Functional annotation BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
UniProt C5XWZ0
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF88
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G15890 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g09359.1 : BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a019316
Brachypodium -
Barley HORVU6Hr1G035880.1 , HORVU6Hr1G035880.2 , HORVU6Hr1G035880.3 , HORVU6Hr1G035880.4
Wheat TraesCS6D02G164200 , TraesCS6D02G164200
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G069200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
2 Sobic.003G379800 armadillo/beta-catenin repeat family protein, putative, expressed -
3 Sobic.006G059700 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
4 Sobic.004G225900 GEM, putative, expressed -
5 Sobic.001G070800 expressed protein -
6 Sobic.006G136800 "shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
7 Sobic.002G312900 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
8 Sobic.001G009500 - -
9 Sobic.010G185000 VQ domain containing protein, putative, expressed -
10 Sobic.003G429000 NADPH quinone oxidoreductase, putative, expressed -
11 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
12 Sobic.007G151300 Cupin domain containing protein, expressed -
13 Sobic.009G159200 guanylyl cyclase, putative, expressed -
14 Sobic.004G176600 no apical meristem protein, putative, expressed -
15 Sobic.006G142332 - -
16 Sobic.006G211200 expressed protein -
17 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.009G180000 OsCam1-3 - Calmodulin, expressed K02183: calmodulin
19 Sobic.009G077800 expressed protein -
20 Sobic.004G061200 expressed protein -


Gene co-expression network
sample Sobic004G069200 Sobic004G069200 Sobic001G247600 Sobic001G247600 Sobic004G069200--Sobic001G247600 Sobic003G379800 Sobic003G379800 Sobic004G069200--Sobic003G379800 Sobic006G059700 Sobic006G059700 Sobic004G069200--Sobic006G059700 Sobic004G225900 Sobic004G225900 Sobic004G069200--Sobic004G225900 Sobic001G070800 Sobic001G070800 Sobic004G069200--Sobic001G070800 Sobic006G136800 Sobic006G136800 Sobic004G069200--Sobic006G136800 Sobic002G312900 Sobic002G312900 Sobic004G069200--Sobic002G312900 Sobic001G009500 Sobic001G009500 Sobic004G069200--Sobic001G009500 Sobic010G185000 Sobic010G185000 Sobic004G069200--Sobic010G185000 Sobic007G184600 Sobic007G184600 Sobic001G247600--Sobic007G184600 Sobic002G200600 Sobic002G200600 Sobic001G247600--Sobic002G200600 Sobic001G247600--Sobic004G225900 Sobic009G077800 Sobic009G077800 Sobic001G247600--Sobic009G077800 Sobic003G417800 Sobic003G417800 Sobic001G247600--Sobic003G417800 Sobic001G119400 Sobic001G119400 Sobic001G247600--Sobic001G119400 Sobic009G139400 Sobic009G139400 Sobic001G247600--Sobic009G139400 Sobic004G205100 Sobic004G205100 Sobic001G247600--Sobic004G205100 Sobic001G177800 Sobic001G177800 Sobic001G247600--Sobic001G177800 Sobic009G143400 Sobic009G143400 Sobic003G379800--Sobic009G143400 Sobic004G061200 Sobic004G061200 Sobic003G379800--Sobic004G061200 Sobic003G393700 Sobic003G393700 Sobic003G379800--Sobic003G393700 Sobic003G379800--Sobic004G069200 Sobic001G389000 Sobic001G389000 Sobic003G379800--Sobic001G389000 Sobic010G086200 Sobic010G086200 Sobic003G379800--Sobic010G086200 Sobic003G379800--Sobic001G070800 Sobic002G393000 Sobic002G393000 Sobic003G379800--Sobic002G393000 Sobic009G159200 Sobic009G159200 Sobic003G379800--Sobic009G159200 Sobic003G404600 Sobic003G404600 Sobic006G059700--Sobic003G404600 Sobic004G262200 Sobic004G262200 Sobic006G059700--Sobic004G262200 Sobic003G280400 Sobic003G280400 Sobic006G059700--Sobic003G280400 Sobic010G272300 Sobic010G272300 Sobic006G059700--Sobic010G272300 Sobic010G001000 Sobic010G001000 Sobic006G059700--Sobic010G001000 Sobic003G366600 Sobic003G366600 Sobic006G059700--Sobic003G366600 Sobic001G147900 Sobic001G147900 Sobic006G059700--Sobic001G147900 Sobic006G125100 Sobic006G125100 Sobic006G059700--Sobic006G125100 Sobic006G059700--Sobic002G312900 Sobic004G225900--Sobic001G247600 Sobic002G017800 Sobic002G017800 Sobic004G225900--Sobic002G017800 Sobic001G318500 Sobic001G318500 Sobic004G225900--Sobic001G318500 Sobic004G225900--Sobic009G077800 Sobic002G302500 Sobic002G302500 Sobic004G225900--Sobic002G302500 Sobic010G270500 Sobic010G270500 Sobic004G225900--Sobic010G270500 Sobic009G111000 Sobic009G111000 Sobic004G225900--Sobic009G111000 Sobic002G004900 Sobic002G004900 Sobic004G225900--Sobic002G004900 Sobic001G325400 Sobic001G325400 Sobic004G225900--Sobic001G325400 Sobic003G297600 Sobic003G297600 Sobic001G070800--Sobic003G297600 Sobic001G070800--Sobic009G077800 Sobic001G070800--Sobic003G393700 Sobic002G416600 Sobic002G416600 Sobic001G070800--Sobic002G416600 Sobic001G070800--Sobic009G139400 Sobic001G070800--Sobic001G177800 Sobic001G317200 Sobic001G317200 Sobic001G070800--Sobic001G317200 Sobic006G099900 Sobic006G099900 Sobic001G070800--Sobic006G099900 Sobic001G252300 Sobic001G252300 Sobic001G070800--Sobic001G252300 Sobic004G046200 Sobic004G046200 Sobic006G136800--Sobic004G046200 Sobic002G081600 Sobic002G081600 Sobic006G136800--Sobic002G081600 Sobic003G436700 Sobic003G436700 Sobic006G136800--Sobic003G436700 Sobic001G295200 Sobic001G295200 Sobic006G136800--Sobic001G295200 Sobic001G036900 Sobic001G036900 Sobic006G136800--Sobic001G036900 Sobic006G136800--Sobic004G205100 Sobic004G340900 Sobic004G340900 Sobic006G136800--Sobic004G340900 Sobic006G136800--Sobic001G389000 Sobic001G500000 Sobic001G500000 Sobic006G136800--Sobic001G500000 Sobic004G176600 Sobic004G176600 Sobic002G312900--Sobic004G176600 Sobic008G128900 Sobic008G128900 Sobic002G312900--Sobic008G128900 Sobic010G195500 Sobic010G195500 Sobic002G312900--Sobic010G195500 Sobic005G043000 Sobic005G043000 Sobic002G312900--Sobic005G043000 Sobic003G416300 Sobic003G416300 Sobic002G312900--Sobic003G416300 Sobic002G312900--Sobic006G059700 Sobic002G312900--Sobic003G366600 Sobic002G312900--Sobic001G147900 Sobic005G084600 Sobic005G084600 Sobic002G312900--Sobic005G084600 Sobic001G009500--Sobic001G247600 Sobic008G106700 Sobic008G106700 Sobic001G009500--Sobic008G106700 Sobic003G343900 Sobic003G343900 Sobic001G009500--Sobic003G343900 Sobic001G009500--Sobic001G389000 Sobic009G074100 Sobic009G074100 Sobic001G009500--Sobic009G074100 Sobic001G009500--Sobic001G119400 Sobic004G100700 Sobic004G100700 Sobic001G009500--Sobic004G100700 Sobic004G075000 Sobic004G075000 Sobic001G009500--Sobic004G075000 Sobic008G186100 Sobic008G186100 Sobic001G009500--Sobic008G186100 Sobic002G247600 Sobic002G247600 Sobic010G185000--Sobic002G247600 Sobic005G018700 Sobic005G018700 Sobic010G185000--Sobic005G018700 Sobic007G227300 Sobic007G227300 Sobic010G185000--Sobic007G227300 Sobic009G240600 Sobic009G240600 Sobic010G185000--Sobic009G240600 Sobic004G348400 Sobic004G348400 Sobic010G185000--Sobic004G348400 Sobic002G375400 Sobic002G375400 Sobic010G185000--Sobic002G375400 Sobic001G481400 Sobic001G481400 Sobic010G185000--Sobic001G481400 Sobic005G206601 Sobic005G206601 Sobic010G185000--Sobic005G206601 Sobic007G151300 Sobic007G151300 Sobic010G185000--Sobic007G151300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.