Gene annotation
Transcriptome id Sobic.006G211200.1
Synonym Sb06g028170
Functional annotation expressed protein
UniProt C5YFN4
Pfam -
Panther DB PTHR36320 PTHR36320:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g52180.1 : expressed protein
MaizeGDB (Corn) Zm00025a057005 , Zm00025a009831
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G211200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G147000 ribosomal protein L14, putative, expressed K02875: RP-L14e, large subunit ribosomal protein L14e
2 Sobic.003G321700 KH domain containing protein, putative, expressed K11884: PNO1, RNA-binding protein PNO1
3 Sobic.007G190800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17780: mitochondrial import inner membrane translocase subunit TIM8
4 Sobic.007G019000 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
5 Sobic.004G322200 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
6 Sobic.010G259900 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
7 Sobic.007G212600 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
8 Sobic.001G016400 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
9 Sobic.003G322400 40S ribosomal protein S25, putative, expressed K02975: RP-S25e, small subunit ribosomal protein S25e
10 Sobic.001G016500 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
11 Sobic.007G178600 - K02966: RP-S19e, small subunit ribosomal protein S19e
12 Sobic.003G346600 40S ribosomal protein S23, putative, expressed K02973: RP-S23e, small subunit ribosomal protein S23e
13 Sobic.002G081600 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
14 Sobic.001G084900 expressed protein -
15 Sobic.004G196400 LSM domain containing protein, expressed K11087: SNRPD1, small nuclear ribonucleoprotein D1
16 Sobic.001G070800 expressed protein -
17 Sobic.006G138100 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e
18 Sobic.001G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
19 Sobic.010G260100 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
20 Sobic.009G050300 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e


Gene co-expression network
sample Sobic006G211200 Sobic006G211200 Sobic006G147000 Sobic006G147000 Sobic006G211200--Sobic006G147000 Sobic003G321700 Sobic003G321700 Sobic006G211200--Sobic003G321700 Sobic007G190800 Sobic007G190800 Sobic006G211200--Sobic007G190800 Sobic007G019000 Sobic007G019000 Sobic006G211200--Sobic007G019000 Sobic004G322200 Sobic004G322200 Sobic006G211200--Sobic004G322200 Sobic010G259900 Sobic010G259900 Sobic006G211200--Sobic010G259900 Sobic007G212600 Sobic007G212600 Sobic006G211200--Sobic007G212600 Sobic001G016400 Sobic001G016400 Sobic006G211200--Sobic001G016400 Sobic003G322400 Sobic003G322400 Sobic006G211200--Sobic003G322400 Sobic003G346600 Sobic003G346600 Sobic006G147000--Sobic003G346600 Sobic009G163800 Sobic009G163800 Sobic006G147000--Sobic009G163800 Sobic010G060500 Sobic010G060500 Sobic006G147000--Sobic010G060500 Sobic009G166500 Sobic009G166500 Sobic006G147000--Sobic009G166500 Sobic002G081600 Sobic002G081600 Sobic006G147000--Sobic002G081600 Sobic007G178600 Sobic007G178600 Sobic006G147000--Sobic007G178600 Sobic006G147000--Sobic003G322400 Sobic009G050300 Sobic009G050300 Sobic006G147000--Sobic009G050300 Sobic006G147000--Sobic007G212600 Sobic003G321700--Sobic007G212600 Sobic010G260100 Sobic010G260100 Sobic003G321700--Sobic010G260100 Sobic001G091801 Sobic001G091801 Sobic003G321700--Sobic001G091801 Sobic003G321700--Sobic007G190800 Sobic003G321700--Sobic003G322400 Sobic003G321700--Sobic010G259900 Sobic004G145801 Sobic004G145801 Sobic003G321700--Sobic004G145801 Sobic003G321700--Sobic006G147000 Sobic004G104100 Sobic004G104100 Sobic003G321700--Sobic004G104100 Sobic010G230700 Sobic010G230700 Sobic007G190800--Sobic010G230700 Sobic005G019700 Sobic005G019700 Sobic007G190800--Sobic005G019700 Sobic007G190800--Sobic004G104100 Sobic007G190800--Sobic009G050300 Sobic004G104300 Sobic004G104300 Sobic007G190800--Sobic004G104300 Sobic007G190800--Sobic007G019000 Sobic007G018300 Sobic007G018300 Sobic007G190800--Sobic007G018300 Sobic007G190800--Sobic007G212600 Sobic001G403500 Sobic001G403500 Sobic007G190800--Sobic001G403500 Sobic007G019000--Sobic007G178600 Sobic001G054900 Sobic001G054900 Sobic007G019000--Sobic001G054900 Sobic007G019000--Sobic009G050300 Sobic007G019000--Sobic004G322200 Sobic007G019000--Sobic007G018300 Sobic004G103800 Sobic004G103800 Sobic007G019000--Sobic004G103800 Sobic007G019000--Sobic010G230700 Sobic002G115000 Sobic002G115000 Sobic007G019000--Sobic002G115000 Sobic001G533500 Sobic001G533500 Sobic007G019000--Sobic001G533500 Sobic004G322200--Sobic007G019000 Sobic004G322200--Sobic007G178600 Sobic004G322200--Sobic004G103800 Sobic010G166100 Sobic010G166100 Sobic004G322200--Sobic010G166100 Sobic004G322200--Sobic001G054900 Sobic004G322200--Sobic010G230700 Sobic006G221200 Sobic006G221200 Sobic004G322200--Sobic006G221200 Sobic001G376600 Sobic001G376600 Sobic004G322200--Sobic001G376600 Sobic004G331400 Sobic004G331400 Sobic004G322200--Sobic004G331400 Sobic010G259900--Sobic010G260100 Sobic010G259900--Sobic004G104300 Sobic010G259900--Sobic003G322400 Sobic010G259900--Sobic007G212600 Sobic010G259900--Sobic004G103800 Sobic010G259900--Sobic003G321700 Sobic010G259900--Sobic007G018300 Sobic010G259900--Sobic001G091801 Sobic001G046300 Sobic001G046300 Sobic010G259900--Sobic001G046300 Sobic007G212600--Sobic001G091801 Sobic007G212600--Sobic003G322400 Sobic001G374700 Sobic001G374700 Sobic007G212600--Sobic001G374700 Sobic007G212600--Sobic009G166500 Sobic007G212600--Sobic001G016400 Sobic007G212600--Sobic003G321700 Sobic007G212600--Sobic004G104100 Sobic007G212600--Sobic010G260100 Sobic007G212600--Sobic009G050300 Sobic001G016400--Sobic009G050300 Sobic009G215200 Sobic009G215200 Sobic001G016400--Sobic009G215200 Sobic001G018900 Sobic001G018900 Sobic001G016400--Sobic001G018900 Sobic006G116700 Sobic006G116700 Sobic001G016400--Sobic006G116700 Sobic007G197800 Sobic007G197800 Sobic001G016400--Sobic007G197800 Sobic001G402050 Sobic001G402050 Sobic001G016400--Sobic001G402050 Sobic001G016400--Sobic007G018300 Sobic001G016400--Sobic001G403500 Sobic001G016400--Sobic002G081600 Sobic003G322400--Sobic009G050300 Sobic003G322400--Sobic001G091801 Sobic003G322400--Sobic007G212600 Sobic003G322400--Sobic006G116700 Sobic003G322400--Sobic001G054900 Sobic003G408100 Sobic003G408100 Sobic003G322400--Sobic003G408100 Sobic003G322400--Sobic001G374700 Sobic002G200600 Sobic002G200600 Sobic003G322400--Sobic002G200600 Sobic007G184600 Sobic007G184600 Sobic003G322400--Sobic007G184600
Octagon: transcription factors


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