Gene annotation
Transcriptome id Sobic.004G322200.1
Synonym Sb04g035260
Functional annotation 60S ribosomal protein L35a-3, putative, expressed
UniProt C5XU89
Pfam PF01247
Panther DB PTHR10902
NCBI CDD KOG0887; 60S ribosomal protein L35A/L37
KEGG Orthology K02917; RP-L35Ae, large subunit ribosomal protein L35Ae
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT1G74270 : Ribosomal protein L35Ae family protein
RAP-DB (Rice) LOC_Os02g54470.1 : 60S ribosomal protein L35a-3, putative, expressed
MaizeGDB (Corn) Zm00025a046637 , Zm00025a049712 , Zm00025a013804 , Zm00025a032995
Brachypodium KQK02072 , KQK02071 , KQJ88272 , KQK19187 , KQK04982
Barley HORVU2Hr1G002350.1 , HORVU2Hr1G075780.1 , HORVU1Hr1G084690.6 , HORVU1Hr1G084690.7 , HORVU1Hr1G084690.4 , HORVU1Hr1G084690.5 , HORVU1Hr1G084690.2 , HORVU1Hr1G084690.3 , HORVU1Hr1G084690.1 , HORVU6Hr1G083120.2 , HORVU6Hr1G083120.3 , HORVU6Hr1G083120.1 , HORVU1Hr1G084690.8 , HORVU7Hr1G031850.5 , HORVU6Hr1G007560.1 , HORVU5Hr1G039490.1 , HORVU7Hr1G031850.6 , HORVU7Hr1G031850.4 , HORVU6Hr1G026460.1 , HORVU7Hr1G031850.2 , HORVU7Hr1G031850.3 , HORVU7Hr1G031850.1 , HORVU7Hr1G088410.1 , HORVU3Hr1G001560.1 , HORVU5Hr1G015230.2 , HORVU5Hr1G015230.1
Wheat TraesCS3B02G400700 , TraesCS4A02G283800 , TraesCS7B02G060000 , TraesCS1B02G409800 , TraesCS7B02G060000 , TraesCSU02G081000 , TraesCS1A02G383500 , TraesCS7A02G155900 , TraesCS7D02G156300 , TraesCS1D02G391600 , TraesCS6D02G326700 , TraesCS6B02G376800
Populus -


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cDNA sequences
Sobic.004G322200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G019000 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
2 Sobic.007G178600 - K02966: RP-S19e, small subunit ribosomal protein S19e
3 Sobic.004G103800 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
4 Sobic.010G166100 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
5 Sobic.001G054900 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
6 Sobic.010G230700 60S ribosomal protein L27-3, putative, expressed K02901: RP-L27e, large subunit ribosomal protein L27e
7 Sobic.006G221200 60S ribosomal protein L27-3, putative, expressed K02901: RP-L27e, large subunit ribosomal protein L27e
8 Sobic.001G376600 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
9 Sobic.004G331400 60S ribosomal protein L39, putative, expressed K02924: RP-L39e, large subunit ribosomal protein L39e
10 Sobic.004G271400 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
11 Sobic.009G050300 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
12 Sobic.002G115000 60S ribosomal protein L8, putative, expressed K02938: RP-L8e, large subunit ribosomal protein L8e
13 Sobic.004G104100 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
14 Sobic.007G018300 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1
15 Sobic.005G019700 ribosomal protein, putative, expressed K02960: RP-S16e, small subunit ribosomal protein S16e
16 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e
17 Sobic.007G190800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17780: mitochondrial import inner membrane translocase subunit TIM8
18 Sobic.009G163800 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
19 Sobic.003G152600 40S ribosomal protein S27a, putative, expressed K02977: RP-S27Ae, RPS27A, ubiquitin-small subunit ribosomal protein S27Ae
20 Sobic.002G047600 60S ribosomal protein L15, putative, expressed K02877: RP-L15e, large subunit ribosomal protein L15e


Gene co-expression network
sample Sobic004G322200 Sobic004G322200 Sobic007G019000 Sobic007G019000 Sobic004G322200--Sobic007G019000 Sobic007G178600 Sobic007G178600 Sobic004G322200--Sobic007G178600 Sobic004G103800 Sobic004G103800 Sobic004G322200--Sobic004G103800 Sobic010G166100 Sobic010G166100 Sobic004G322200--Sobic010G166100 Sobic001G054900 Sobic001G054900 Sobic004G322200--Sobic001G054900 Sobic010G230700 Sobic010G230700 Sobic004G322200--Sobic010G230700 Sobic006G221200 Sobic006G221200 Sobic004G322200--Sobic006G221200 Sobic001G376600 Sobic001G376600 Sobic004G322200--Sobic001G376600 Sobic004G331400 Sobic004G331400 Sobic004G322200--Sobic004G331400 Sobic007G019000--Sobic007G178600 Sobic007G019000--Sobic001G054900 Sobic009G050300 Sobic009G050300 Sobic007G019000--Sobic009G050300 Sobic007G019000--Sobic004G322200 Sobic007G018300 Sobic007G018300 Sobic007G019000--Sobic007G018300 Sobic007G019000--Sobic004G103800 Sobic007G019000--Sobic010G230700 Sobic002G115000 Sobic002G115000 Sobic007G019000--Sobic002G115000 Sobic001G533500 Sobic001G533500 Sobic007G019000--Sobic001G533500 Sobic004G008400 Sobic004G008400 Sobic007G178600--Sobic004G008400 Sobic007G178600--Sobic007G019000 Sobic003G346600 Sobic003G346600 Sobic007G178600--Sobic003G346600 Sobic007G178600--Sobic009G050300 Sobic008G108601 Sobic008G108601 Sobic007G178600--Sobic008G108601 Sobic007G178600--Sobic006G221200 Sobic009G163800 Sobic009G163800 Sobic007G178600--Sobic009G163800 Sobic003G249700 Sobic003G249700 Sobic007G178600--Sobic003G249700 Sobic002G047600 Sobic002G047600 Sobic007G178600--Sobic002G047600 Sobic004G104100 Sobic004G104100 Sobic004G103800--Sobic004G104100 Sobic004G104300 Sobic004G104300 Sobic004G103800--Sobic004G104300 Sobic004G103800--Sobic007G019000 Sobic004G103800--Sobic010G166100 Sobic004G152700 Sobic004G152700 Sobic004G103800--Sobic004G152700 Sobic001G091801 Sobic001G091801 Sobic004G103800--Sobic001G091801 Sobic004G103800--Sobic010G230700 Sobic004G103800--Sobic004G322200 Sobic004G103800--Sobic007G018300 Sobic010G166100--Sobic004G104100 Sobic010G166100--Sobic006G221200 Sobic010G166100--Sobic004G103800 Sobic010G166100--Sobic007G178600 Sobic010G166100--Sobic007G019000 Sobic010G166100--Sobic004G322200 Sobic006G260400 Sobic006G260400 Sobic010G166100--Sobic006G260400 Sobic001G085400 Sobic001G085400 Sobic010G166100--Sobic001G085400 Sobic010G166100--Sobic002G047600 Sobic003G408100 Sobic003G408100 Sobic001G054900--Sobic003G408100 Sobic010G206200 Sobic010G206200 Sobic001G054900--Sobic010G206200 Sobic001G054900--Sobic009G050300 Sobic006G116700 Sobic006G116700 Sobic001G054900--Sobic006G116700 Sobic001G054900--Sobic007G019000 Sobic001G054900--Sobic009G163800 Sobic001G036900 Sobic001G036900 Sobic001G054900--Sobic001G036900 Sobic001G018900 Sobic001G018900 Sobic001G054900--Sobic001G018900 Sobic001G054900--Sobic001G091801 Sobic005G019700 Sobic005G019700 Sobic010G230700--Sobic005G019700 Sobic010G230700--Sobic007G018300 Sobic010G230700--Sobic004G104100 Sobic009G054800 Sobic009G054800 Sobic010G230700--Sobic009G054800 Sobic010G230700--Sobic006G221200 Sobic010G230700--Sobic009G050300 Sobic010G230700--Sobic001G091801 Sobic010G230700--Sobic007G019000 Sobic002G372400 Sobic002G372400 Sobic010G230700--Sobic002G372400 Sobic006G221200--Sobic004G104100 Sobic006G221200--Sobic010G166100 Sobic006G221200--Sobic007G178600 Sobic006G221200--Sobic010G230700 Sobic004G198400 Sobic004G198400 Sobic006G221200--Sobic004G198400 Sobic007G019400 Sobic007G019400 Sobic006G221200--Sobic007G019400 Sobic006G221200--Sobic001G091801 Sobic006G221200--Sobic010G206200 Sobic006G221200--Sobic005G019700 Sobic001G376600--Sobic004G331400 Sobic009G105700 Sobic009G105700 Sobic001G376600--Sobic009G105700 Sobic001G376600--Sobic010G206200 Sobic001G376600--Sobic001G091801 Sobic002G175100 Sobic002G175100 Sobic001G376600--Sobic002G175100 Sobic001G376600--Sobic009G050300 Sobic006G106100 Sobic006G106100 Sobic001G376600--Sobic006G106100 Sobic001G376600--Sobic005G019700 Sobic001G376600--Sobic006G221200 Sobic004G331400--Sobic002G175100 Sobic004G331400--Sobic001G376600 Sobic004G331400--Sobic009G163800 Sobic004G331400--Sobic009G105700 Sobic004G331400--Sobic003G408100 Sobic004G331400--Sobic003G346600 Sobic004G331400--Sobic009G050300 Sobic004G331400--Sobic007G178600 Sobic004G331400--Sobic001G091801
Octagon: transcription factors


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