Gene annotation
Transcriptome id Sobic.008G161000.2,Sobic.008G161000.1
Synonym Sb08g020820
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1B6PE21
Pfam PF14531
Panther DB PTHR23257 PTHR23257:SF499
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22750 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g43760.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a007333 , Zm00025a004633
Brachypodium KQJ85906 , KQK14036
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G161000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
2 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
3 Sobic.009G152200 OsFBT7 - F-box and tubby domain containing protein, expressed -
4 Sobic.001G037000 PHD finger protein, putative, expressed -
5 Sobic.009G129000 E3 ubiquitin-protein ligase MGRN1, putative, expressed -
6 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
7 Sobic.010G204300 expressed protein -
8 Sobic.010G204600 SNF7 domain containing protein, putative, expressed K12197: CHMP1, VPS46, charged multivesicular body protein 1
9 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
10 Sobic.001G095300 prenylated rab acceptor, putative, expressed -
11 Sobic.004G325700 CYPRO4, putative, expressed -
12 Sobic.001G422900 zinc finger family protein, putative, expressed -
13 Sobic.007G059900 DUF292 domain containing protein, expressed -
14 Sobic.002G022400 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
15 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
16 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
17 Sobic.010G086200 GRAM domain containing protein, expressed -
18 Sobic.002G330000 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
19 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
20 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1


Gene co-expression network
sample Sobic008G161000 Sobic008G161000 Sobic003G249800 Sobic003G249800 Sobic008G161000--Sobic003G249800 Sobic009G033700 Sobic009G033700 Sobic008G161000--Sobic009G033700 Sobic009G152200 Sobic009G152200 Sobic008G161000--Sobic009G152200 Sobic001G037000 Sobic001G037000 Sobic008G161000--Sobic001G037000 Sobic009G129000 Sobic009G129000 Sobic008G161000--Sobic009G129000 Sobic009G016201 Sobic009G016201 Sobic008G161000--Sobic009G016201 Sobic010G204300 Sobic010G204300 Sobic008G161000--Sobic010G204300 Sobic010G204600 Sobic010G204600 Sobic008G161000--Sobic010G204600 Sobic010G213400 Sobic010G213400 Sobic008G161000--Sobic010G213400 Sobic003G249800--Sobic008G161000 Sobic003G249800--Sobic001G037000 Sobic003G249800--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic003G249800--Sobic002G046100 Sobic002G282400 Sobic002G282400 Sobic003G249800--Sobic002G282400 Sobic002G330000 Sobic002G330000 Sobic003G249800--Sobic002G330000 Sobic009G143400 Sobic009G143400 Sobic003G249800--Sobic009G143400 Sobic002G211900 Sobic002G211900 Sobic003G249800--Sobic002G211900 Sobic003G181500 Sobic003G181500 Sobic003G249800--Sobic003G181500 Sobic010G086200 Sobic010G086200 Sobic009G033700--Sobic010G086200 Sobic003G037800 Sobic003G037800 Sobic009G033700--Sobic003G037800 Sobic001G281400 Sobic001G281400 Sobic009G033700--Sobic001G281400 Sobic009G033700--Sobic003G249800 Sobic007G198100 Sobic007G198100 Sobic009G033700--Sobic007G198100 Sobic009G033700--Sobic009G129000 Sobic002G245100 Sobic002G245100 Sobic009G033700--Sobic002G245100 Sobic009G033700--Sobic009G143400 Sobic004G065500 Sobic004G065500 Sobic009G033700--Sobic004G065500 Sobic009G152200--Sobic008G161000 Sobic007G186300 Sobic007G186300 Sobic009G152200--Sobic007G186300 Sobic007G059900 Sobic007G059900 Sobic009G152200--Sobic007G059900 Sobic001G403700 Sobic001G403700 Sobic009G152200--Sobic001G403700 Sobic001G330700 Sobic001G330700 Sobic009G152200--Sobic001G330700 Sobic009G152200--Sobic009G016201 Sobic003G115800 Sobic003G115800 Sobic009G152200--Sobic003G115800 Sobic003G248600 Sobic003G248600 Sobic009G152200--Sobic003G248600 Sobic009G152200--Sobic003G249800 Sobic001G037000--Sobic003G249800 Sobic003G063200 Sobic003G063200 Sobic001G037000--Sobic003G063200 Sobic001G422900 Sobic001G422900 Sobic001G037000--Sobic001G422900 Sobic001G037000--Sobic010G204600 Sobic001G067601 Sobic001G067601 Sobic001G037000--Sobic001G067601 Sobic001G037000--Sobic009G016201 Sobic003G265200 Sobic003G265200 Sobic001G037000--Sobic003G265200 Sobic002G205300 Sobic002G205300 Sobic001G037000--Sobic002G205300 Sobic001G037000--Sobic003G181500 Sobic009G129000--Sobic010G086200 Sobic005G028700 Sobic005G028700 Sobic009G129000--Sobic005G028700 Sobic009G183300 Sobic009G183300 Sobic009G129000--Sobic009G183300 Sobic009G129000--Sobic009G033700 Sobic009G200700 Sobic009G200700 Sobic009G129000--Sobic009G200700 Sobic009G129000--Sobic004G065500 Sobic010G217800 Sobic010G217800 Sobic009G129000--Sobic010G217800 Sobic006G267200 Sobic006G267200 Sobic009G129000--Sobic006G267200 Sobic009G129000--Sobic010G204600 Sobic002G263800 Sobic002G263800 Sobic009G016201--Sobic002G263800 Sobic007G095400 Sobic007G095400 Sobic009G016201--Sobic007G095400 Sobic008G132800 Sobic008G132800 Sobic009G016201--Sobic008G132800 Sobic004G172700 Sobic004G172700 Sobic009G016201--Sobic004G172700 Sobic009G016201--Sobic003G249800 Sobic009G016201--Sobic001G037000 Sobic009G016201--Sobic008G161000 Sobic010G237000 Sobic010G237000 Sobic009G016201--Sobic010G237000 Sobic010G029400 Sobic010G029400 Sobic009G016201--Sobic010G029400 Sobic010G204300--Sobic008G161000 Sobic010G204300--Sobic003G115800 Sobic010G204300--Sobic007G059900 Sobic001G147200 Sobic001G147200 Sobic010G204300--Sobic001G147200 Sobic002G296300 Sobic002G296300 Sobic010G204300--Sobic002G296300 Sobic002G202300 Sobic002G202300 Sobic010G204300--Sobic002G202300 Sobic010G204300--Sobic003G181500 Sobic006G062800 Sobic006G062800 Sobic010G204300--Sobic006G062800 Sobic010G246000 Sobic010G246000 Sobic010G204300--Sobic010G246000 Sobic001G095300 Sobic001G095300 Sobic010G204600--Sobic001G095300 Sobic010G204600--Sobic003G063200 Sobic002G405600 Sobic002G405600 Sobic010G204600--Sobic002G405600 Sobic004G157000 Sobic004G157000 Sobic010G204600--Sobic004G157000 Sobic009G023200 Sobic009G023200 Sobic010G204600--Sobic009G023200 Sobic010G204600--Sobic009G129000 Sobic001G055600 Sobic001G055600 Sobic010G204600--Sobic001G055600 Sobic003G202200 Sobic003G202200 Sobic010G204600--Sobic003G202200 Sobic010G204600--Sobic009G033700 Sobic003G368500 Sobic003G368500 Sobic010G213400--Sobic003G368500 Sobic010G213400--Sobic003G249800 Sobic010G213400--Sobic009G033700 Sobic004G284500 Sobic004G284500 Sobic010G213400--Sobic004G284500 Sobic010G163600 Sobic010G163600 Sobic010G213400--Sobic010G163600 Sobic001G224400 Sobic001G224400 Sobic010G213400--Sobic001G224400 Sobic010G213400--Sobic006G062800 Sobic001G445800 Sobic001G445800 Sobic010G213400--Sobic001G445800 Sobic010G153100 Sobic010G153100 Sobic010G213400--Sobic010G153100
Octagon: transcription factors


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