Gene annotation
Transcriptome id Sobic.010G204300.1
Synonym Sb10g025170
Functional annotation expressed protein
UniProt C5Z6N4
Pfam PF02845
Panther DB PTHR31245 PTHR31245:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G32440 : Ubiquitin system component Cue protein
RAP-DB (Rice) LOC_Os06g43550.1 : expressed protein
MaizeGDB (Corn) Zm00025a051413 , Zm00025a042077 , Zm00025a038687
Brachypodium KQK16754
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G204300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G161000 protein kinase domain containing protein, expressed -
2 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
3 Sobic.007G059900 DUF292 domain containing protein, expressed -
4 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
5 Sobic.002G296300 expressed protein -
6 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
7 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
8 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
9 Sobic.010G246000 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
11 Sobic.001G064800 expp1 protein precursor, putative, expressed -
12 Sobic.002G211900 zinc finger, C3HC4 type domain containing protein, expressed K16274: E3 ubiquitin-protein ligase AIP2
13 Sobic.010G047400 "HGW(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659929)@proline-rich cell wall protein-like, putative, expressed -
14 Sobic.006G182100 ORM1, putative, expressed -
15 Sobic.010G217900 diphthamide biosynthesis protein 3, putative, expressed K15455: DPH3, diphthamide biosynthesis protein 3
16 Sobic.002G261900 arabinogalactan protein, putative, expressed -
17 Sobic.006G192500 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
18 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
19 Sobic.001G283500 VHS and GAT domain containing protein, expressed -
20 Sobic.001G309500 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase


Gene co-expression network
sample Sobic010G204300 Sobic010G204300 Sobic008G161000 Sobic008G161000 Sobic010G204300--Sobic008G161000 Sobic003G115800 Sobic003G115800 Sobic010G204300--Sobic003G115800 Sobic007G059900 Sobic007G059900 Sobic010G204300--Sobic007G059900 Sobic001G147200 Sobic001G147200 Sobic010G204300--Sobic001G147200 Sobic002G296300 Sobic002G296300 Sobic010G204300--Sobic002G296300 Sobic002G202300 Sobic002G202300 Sobic010G204300--Sobic002G202300 Sobic003G181500 Sobic003G181500 Sobic010G204300--Sobic003G181500 Sobic006G062800 Sobic006G062800 Sobic010G204300--Sobic006G062800 Sobic010G246000 Sobic010G246000 Sobic010G204300--Sobic010G246000 Sobic003G249800 Sobic003G249800 Sobic008G161000--Sobic003G249800 Sobic009G033700 Sobic009G033700 Sobic008G161000--Sobic009G033700 Sobic009G152200 Sobic009G152200 Sobic008G161000--Sobic009G152200 Sobic001G037000 Sobic001G037000 Sobic008G161000--Sobic001G037000 Sobic009G129000 Sobic009G129000 Sobic008G161000--Sobic009G129000 Sobic009G016201 Sobic009G016201 Sobic008G161000--Sobic009G016201 Sobic008G161000--Sobic010G204300 Sobic010G204600 Sobic010G204600 Sobic008G161000--Sobic010G204600 Sobic010G213400 Sobic010G213400 Sobic008G161000--Sobic010G213400 Sobic007G186300 Sobic007G186300 Sobic003G115800--Sobic007G186300 Sobic004G300900 Sobic004G300900 Sobic003G115800--Sobic004G300900 Sobic003G220600 Sobic003G220600 Sobic003G115800--Sobic003G220600 Sobic002G078400 Sobic002G078400 Sobic003G115800--Sobic002G078400 Sobic003G115800--Sobic010G204300 Sobic001G054200 Sobic001G054200 Sobic003G115800--Sobic001G054200 Sobic003G115800--Sobic002G202300 Sobic004G079100 Sobic004G079100 Sobic003G115800--Sobic004G079100 Sobic004G293700 Sobic004G293700 Sobic003G115800--Sobic004G293700 Sobic007G059900--Sobic003G220600 Sobic007G059900--Sobic006G062800 Sobic007G059900--Sobic010G204300 Sobic007G059900--Sobic007G186300 Sobic002G261900 Sobic002G261900 Sobic007G059900--Sobic002G261900 Sobic007G059900--Sobic008G161000 Sobic007G059900--Sobic004G293700 Sobic007G059900--Sobic002G296300 Sobic007G059900--Sobic009G152200 Sobic003G019200 Sobic003G019200 Sobic001G147200--Sobic003G019200 Sobic001G147200--Sobic010G246000 Sobic002G118600 Sobic002G118600 Sobic001G147200--Sobic002G118600 Sobic001G147200--Sobic010G204300 Sobic006G228300 Sobic006G228300 Sobic001G147200--Sobic006G228300 Sobic001G399100 Sobic001G399100 Sobic001G147200--Sobic001G399100 Sobic001G538866 Sobic001G538866 Sobic001G147200--Sobic001G538866 Sobic002G374100 Sobic002G374100 Sobic001G147200--Sobic002G374100 Sobic006G263100 Sobic006G263100 Sobic001G147200--Sobic006G263100 Sobic005G176000 Sobic005G176000 Sobic002G296300--Sobic005G176000 Sobic008G097401 Sobic008G097401 Sobic002G296300--Sobic008G097401 Sobic002G296300--Sobic010G204300 Sobic002G296300--Sobic007G186300 Sobic002G296300--Sobic003G220600 Sobic002G296300--Sobic003G115800 Sobic003G332401 Sobic003G332401 Sobic002G296300--Sobic003G332401 Sobic001G403700 Sobic001G403700 Sobic002G296300--Sobic001G403700 Sobic003G007500 Sobic003G007500 Sobic002G296300--Sobic003G007500 Sobic003G253000 Sobic003G253000 Sobic002G202300--Sobic003G253000 Sobic002G202300--Sobic003G220600 Sobic006G141500 Sobic006G141500 Sobic002G202300--Sobic006G141500 Sobic006G264300 Sobic006G264300 Sobic002G202300--Sobic006G264300 Sobic002G046100 Sobic002G046100 Sobic002G202300--Sobic002G046100 Sobic002G202300--Sobic003G115800 Sobic002G202300--Sobic010G204300 Sobic002G202300--Sobic006G062800 Sobic006G182100 Sobic006G182100 Sobic002G202300--Sobic006G182100 Sobic004G187900 Sobic004G187900 Sobic003G181500--Sobic004G187900 Sobic003G350300 Sobic003G350300 Sobic003G181500--Sobic003G350300 Sobic010G149300 Sobic010G149300 Sobic003G181500--Sobic010G149300 Sobic003G181500--Sobic003G249800 Sobic001G288800 Sobic001G288800 Sobic003G181500--Sobic001G288800 Sobic001G281400 Sobic001G281400 Sobic003G181500--Sobic001G281400 Sobic009G023200 Sobic009G023200 Sobic003G181500--Sobic009G023200 Sobic002G211900 Sobic002G211900 Sobic003G181500--Sobic002G211900 Sobic003G181500--Sobic002G046100 Sobic006G062800--Sobic010G213400 Sobic006G062800--Sobic003G249800 Sobic003G285800 Sobic003G285800 Sobic006G062800--Sobic003G285800 Sobic006G062800--Sobic007G059900 Sobic006G062800--Sobic009G129000 Sobic002G218000 Sobic002G218000 Sobic006G062800--Sobic002G218000 Sobic006G062800--Sobic002G202300 Sobic006G062800--Sobic009G033700 Sobic006G062800--Sobic002G261900 Sobic002G294700 Sobic002G294700 Sobic010G246000--Sobic002G294700 Sobic010G246000--Sobic002G374100 Sobic010G246000--Sobic003G019200 Sobic010G246000--Sobic001G147200 Sobic010G245800 Sobic010G245800 Sobic010G246000--Sobic010G245800 Sobic008G177800 Sobic008G177800 Sobic010G246000--Sobic008G177800 Sobic002G354900 Sobic002G354900 Sobic010G246000--Sobic002G354900 Sobic010G234600 Sobic010G234600 Sobic010G246000--Sobic010G234600 Sobic004G036600 Sobic004G036600 Sobic010G246000--Sobic004G036600
Octagon: transcription factors


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