Gene annotation
Transcriptome id Sobic.010G047400.1
Synonym Sb10g004130
Functional annotation "HGW(Ortholog in rice:Li et al., 2012)" (PubMedID : 31659929)
proline-rich cell wall protein-like, putative, expressed
UniProt C5Z4G9
Pfam -
Panther DB PTHR15960
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53330 : Ubiquitin-associated/translation elongation factor EF1B protein
RAP-DB (Rice) LOC_Os06g06530.1 : proline-rich cell wall protein-like, putative, expressed
MaizeGDB (Corn) Zm00025a049954
Brachypodium KQK19498
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
2 Sobic.010G204300 expressed protein -
3 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
4 Sobic.004G157000 protein kinase domain containing protein, expressed K13430: serine/threonine-protein kinase PBS1
5 Sobic.010G217900 diphthamide biosynthesis protein 3, putative, expressed K15455: DPH3, diphthamide biosynthesis protein 3
6 Sobic.001G064800 expp1 protein precursor, putative, expressed -
7 Sobic.001G283500 VHS and GAT domain containing protein, expressed -
8 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
9 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
10 Sobic.008G161000 protein kinase domain containing protein, expressed -
11 Sobic.001G380400 reticulon domain containing protein, putative, expressed -
12 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
13 Sobic.010G163600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
14 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11
15 Sobic.006G192500 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
16 Sobic.002G211900 zinc finger, C3HC4 type domain containing protein, expressed K16274: E3 ubiquitin-protein ligase AIP2
17 Sobic.005G092800 expressed protein -
18 Sobic.010G153100 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
19 Sobic.010G041700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
20 Sobic.006G182100 ORM1, putative, expressed -


Gene co-expression network
sample Sobic010G047400 Sobic010G047400 Sobic005G228000 Sobic005G228000 Sobic010G047400--Sobic005G228000 Sobic010G204300 Sobic010G204300 Sobic010G047400--Sobic010G204300 Sobic001G019900 Sobic001G019900 Sobic010G047400--Sobic001G019900 Sobic004G157000 Sobic004G157000 Sobic010G047400--Sobic004G157000 Sobic010G217900 Sobic010G217900 Sobic010G047400--Sobic010G217900 Sobic001G064800 Sobic001G064800 Sobic010G047400--Sobic001G064800 Sobic001G283500 Sobic001G283500 Sobic010G047400--Sobic001G283500 Sobic003G249800 Sobic003G249800 Sobic010G047400--Sobic003G249800 Sobic002G212200 Sobic002G212200 Sobic010G047400--Sobic002G212200 Sobic005G228000--Sobic001G019900 Sobic005G228000--Sobic002G212200 Sobic001G067601 Sobic001G067601 Sobic005G228000--Sobic001G067601 Sobic002G345300 Sobic002G345300 Sobic005G228000--Sobic002G345300 Sobic009G023200 Sobic009G023200 Sobic005G228000--Sobic009G023200 Sobic005G228000--Sobic004G157000 Sobic003G350300 Sobic003G350300 Sobic005G228000--Sobic003G350300 Sobic009G094450 Sobic009G094450 Sobic005G228000--Sobic009G094450 Sobic005G228000--Sobic010G047400 Sobic008G161000 Sobic008G161000 Sobic010G204300--Sobic008G161000 Sobic003G115800 Sobic003G115800 Sobic010G204300--Sobic003G115800 Sobic007G059900 Sobic007G059900 Sobic010G204300--Sobic007G059900 Sobic001G147200 Sobic001G147200 Sobic010G204300--Sobic001G147200 Sobic002G296300 Sobic002G296300 Sobic010G204300--Sobic002G296300 Sobic002G202300 Sobic002G202300 Sobic010G204300--Sobic002G202300 Sobic003G181500 Sobic003G181500 Sobic010G204300--Sobic003G181500 Sobic006G062800 Sobic006G062800 Sobic010G204300--Sobic006G062800 Sobic010G246000 Sobic010G246000 Sobic010G204300--Sobic010G246000 Sobic001G019900--Sobic001G067601 Sobic001G019900--Sobic005G228000 Sobic001G019900--Sobic009G023200 Sobic001G019900--Sobic003G350300 Sobic001G019900--Sobic003G249800 Sobic002G046100 Sobic002G046100 Sobic001G019900--Sobic002G046100 Sobic001G445800 Sobic001G445800 Sobic001G019900--Sobic001G445800 Sobic001G019900--Sobic002G212200 Sobic003G321700 Sobic003G321700 Sobic001G019900--Sobic003G321700 Sobic010G204600 Sobic010G204600 Sobic004G157000--Sobic010G204600 Sobic009G046600 Sobic009G046600 Sobic004G157000--Sobic009G046600 Sobic004G157000--Sobic003G249800 Sobic004G157000--Sobic002G046100 Sobic009G129000 Sobic009G129000 Sobic004G157000--Sobic009G129000 Sobic004G157000--Sobic009G023200 Sobic009G033700 Sobic009G033700 Sobic004G157000--Sobic009G033700 Sobic004G157000--Sobic002G345300 Sobic003G285800 Sobic003G285800 Sobic004G157000--Sobic003G285800 Sobic010G217900--Sobic001G067601 Sobic010G217900--Sobic001G019900 Sobic010G217900--Sobic005G228000 Sobic001G533300 Sobic001G533300 Sobic010G217900--Sobic001G533300 Sobic004G247200 Sobic004G247200 Sobic010G217900--Sobic004G247200 Sobic001G037000 Sobic001G037000 Sobic010G217900--Sobic001G037000 Sobic003G162700 Sobic003G162700 Sobic010G217900--Sobic003G162700 Sobic004G177700 Sobic004G177700 Sobic010G217900--Sobic004G177700 Sobic005G028700 Sobic005G028700 Sobic010G217900--Sobic005G028700 Sobic006G182100 Sobic006G182100 Sobic001G064800--Sobic006G182100 Sobic002G261800 Sobic002G261800 Sobic001G064800--Sobic002G261800 Sobic001G064800--Sobic001G067601 Sobic010G153100 Sobic010G153100 Sobic001G064800--Sobic010G153100 Sobic001G064800--Sobic001G019900 Sobic001G064800--Sobic001G445800 Sobic001G064800--Sobic010G204300 Sobic004G157800 Sobic004G157800 Sobic001G064800--Sobic004G157800 Sobic001G206400 Sobic001G206400 Sobic001G064800--Sobic001G206400 Sobic008G016900 Sobic008G016900 Sobic001G283500--Sobic008G016900 Sobic007G195701 Sobic007G195701 Sobic001G283500--Sobic007G195701 Sobic001G403700 Sobic001G403700 Sobic001G283500--Sobic001G403700 Sobic001G283500--Sobic003G115800 Sobic009G160200 Sobic009G160200 Sobic001G283500--Sobic009G160200 Sobic001G283500--Sobic010G204300 Sobic001G283500--Sobic002G296300 Sobic010G062800 Sobic010G062800 Sobic001G283500--Sobic010G062800 Sobic010G188100 Sobic010G188100 Sobic001G283500--Sobic010G188100 Sobic003G249800--Sobic008G161000 Sobic003G249800--Sobic001G037000 Sobic003G249800--Sobic009G033700 Sobic003G249800--Sobic002G046100 Sobic002G282400 Sobic002G282400 Sobic003G249800--Sobic002G282400 Sobic002G330000 Sobic002G330000 Sobic003G249800--Sobic002G330000 Sobic009G143400 Sobic009G143400 Sobic003G249800--Sobic009G143400 Sobic002G211900 Sobic002G211900 Sobic003G249800--Sobic002G211900 Sobic003G249800--Sobic003G181500 Sobic002G212200--Sobic005G228000 Sobic002G212200--Sobic001G019900 Sobic002G212200--Sobic001G067601 Sobic007G107000 Sobic007G107000 Sobic002G212200--Sobic007G107000 Sobic002G212200--Sobic003G181500 Sobic002G212200--Sobic003G162700 Sobic002G212200--Sobic009G023200 Sobic002G212200--Sobic002G282400 Sobic002G212200--Sobic001G064800
Octagon: transcription factors


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