Gene annotation
Transcriptome id Sobic.004G222600.1,Sobic.004G222600.2
Synonym Sb04g026710
Functional annotation expressed protein
UniProt C5XXV8 , A0A194YR97
Pfam PF10058
Panther DB PTHR22166 PTHR22166:SF12 PTHR22166 PTHR22166:SF15
NCBI CDD KOG2846; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G31080 : Protein of unknown function (DUF2296)
RAP-DB (Rice) LOC_Os02g41990.2 : expressed protein
MaizeGDB (Corn) Zm00025a032051 , Zm00025a021074
Brachypodium KQK00434
Barley HORVU6Hr1G041720.30 , HORVU1Hr1G060450.1 , HORVU5Hr1G014600.1 , HORVU6Hr1G059040.2 , HORVU6Hr1G059040.3 , HORVU6Hr1G041710.1 , HORVU6Hr1G059040.1 , HORVU1Hr1G060410.1
Wheat TraesCS6D02G213300 , TraesCS2B02G581600 , TraesCS2B02G581600 , TraesCS6A02G221500 , TraesCS6B02G259400
Populus -


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cDNA sequences
Sobic.004G222600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G150000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.003G023500 syntaxin, putative, expressed K08489: syntaxin 16
3 Sobic.003G217100 Yip1 domain containing protein, expressed -
4 Sobic.001G237500 transporter family protein, putative, expressed -
5 Sobic.001G309500 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
6 Sobic.002G296300 expressed protein -
7 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
8 Sobic.003G332401 - K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
9 Sobic.007G115100 hydrolase, NUDIX family, domain containing protein, expressed -
10 Sobic.010G238700 dynamin family protein, putative, expressed K12483: EH domain-containing protein 1
11 Sobic.004G123000 expressed protein -
12 Sobic.001G409900 transporter, putative, expressed -
13 Sobic.003G340700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
14 Sobic.002G214900 polygalacturonase, putative, expressed -
15 Sobic.001G089500 RNA recognition motif containing protein, putative, expressed -
16 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
17 Sobic.006G222400 RNA recognition motif containing protein, putative, expressed -
18 Sobic.008G132800 expressed protein -
19 Sobic.003G311700 cyclase/dehydrase family protein, expressed K18588: coenzyme Q-binding protein COQ10
20 Sobic.001G367000 TRAF-type zinc finger domain-containing protein 1, putative, expressed -


Gene co-expression network
sample Sobic004G222600 Sobic004G222600 Sobic007G150000 Sobic007G150000 Sobic004G222600--Sobic007G150000 Sobic003G023500 Sobic003G023500 Sobic004G222600--Sobic003G023500 Sobic003G217100 Sobic003G217100 Sobic004G222600--Sobic003G217100 Sobic001G237500 Sobic001G237500 Sobic004G222600--Sobic001G237500 Sobic001G309500 Sobic001G309500 Sobic004G222600--Sobic001G309500 Sobic002G296300 Sobic002G296300 Sobic004G222600--Sobic002G296300 Sobic002G090700 Sobic002G090700 Sobic004G222600--Sobic002G090700 Sobic003G332401 Sobic003G332401 Sobic004G222600--Sobic003G332401 Sobic007G115100 Sobic007G115100 Sobic004G222600--Sobic007G115100 Sobic007G150000--Sobic004G222600 Sobic003G340700 Sobic003G340700 Sobic007G150000--Sobic003G340700 Sobic007G150000--Sobic003G023500 Sobic004G123000 Sobic004G123000 Sobic007G150000--Sobic004G123000 Sobic010G238700 Sobic010G238700 Sobic007G150000--Sobic010G238700 Sobic004G159000 Sobic004G159000 Sobic007G150000--Sobic004G159000 Sobic001G013200 Sobic001G013200 Sobic007G150000--Sobic001G013200 Sobic007G150000--Sobic003G217100 Sobic008G130400 Sobic008G130400 Sobic007G150000--Sobic008G130400 Sobic003G023500--Sobic004G222600 Sobic003G023500--Sobic003G217100 Sobic002G214900 Sobic002G214900 Sobic003G023500--Sobic002G214900 Sobic001G214200 Sobic001G214200 Sobic003G023500--Sobic001G214200 Sobic001G409900 Sobic001G409900 Sobic003G023500--Sobic001G409900 Sobic009G191600 Sobic009G191600 Sobic003G023500--Sobic009G191600 Sobic006G222400 Sobic006G222400 Sobic003G023500--Sobic006G222400 Sobic004G054300 Sobic004G054300 Sobic003G023500--Sobic004G054300 Sobic002G376500 Sobic002G376500 Sobic003G023500--Sobic002G376500 Sobic001G105100 Sobic001G105100 Sobic003G217100--Sobic001G105100 Sobic003G217100--Sobic002G090700 Sobic008G132800 Sobic008G132800 Sobic003G217100--Sobic008G132800 Sobic003G217100--Sobic006G222400 Sobic003G217100--Sobic001G309500 Sobic001G067900 Sobic001G067900 Sobic003G217100--Sobic001G067900 Sobic005G184200 Sobic005G184200 Sobic003G217100--Sobic005G184200 Sobic003G217100--Sobic001G237500 Sobic001G408100 Sobic001G408100 Sobic003G217100--Sobic001G408100 Sobic010G105600 Sobic010G105600 Sobic001G237500--Sobic010G105600 Sobic006G257001 Sobic006G257001 Sobic001G237500--Sobic006G257001 Sobic001G237500--Sobic001G105100 Sobic001G237500--Sobic001G067900 Sobic001G237500--Sobic003G217100 Sobic001G237500--Sobic004G222600 Sobic002G131900 Sobic002G131900 Sobic001G237500--Sobic002G131900 Sobic003G052400 Sobic003G052400 Sobic001G237500--Sobic003G052400 Sobic004G132300 Sobic004G132300 Sobic001G237500--Sobic004G132300 Sobic004G196300 Sobic004G196300 Sobic001G309500--Sobic004G196300 Sobic010G153100 Sobic010G153100 Sobic001G309500--Sobic010G153100 Sobic002G078400 Sobic002G078400 Sobic001G309500--Sobic002G078400 Sobic001G309500--Sobic003G217100 Sobic001G526100 Sobic001G526100 Sobic001G309500--Sobic001G526100 Sobic001G309500--Sobic002G090700 Sobic001G309500--Sobic008G132800 Sobic004G066800 Sobic004G066800 Sobic001G309500--Sobic004G066800 Sobic003G155400 Sobic003G155400 Sobic001G309500--Sobic003G155400 Sobic005G176000 Sobic005G176000 Sobic002G296300--Sobic005G176000 Sobic008G097401 Sobic008G097401 Sobic002G296300--Sobic008G097401 Sobic010G204300 Sobic010G204300 Sobic002G296300--Sobic010G204300 Sobic007G186300 Sobic007G186300 Sobic002G296300--Sobic007G186300 Sobic003G220600 Sobic003G220600 Sobic002G296300--Sobic003G220600 Sobic003G115800 Sobic003G115800 Sobic002G296300--Sobic003G115800 Sobic002G296300--Sobic003G332401 Sobic001G403700 Sobic001G403700 Sobic002G296300--Sobic001G403700 Sobic003G007500 Sobic003G007500 Sobic002G296300--Sobic003G007500 Sobic003G116600 Sobic003G116600 Sobic002G090700--Sobic003G116600 Sobic010G007400 Sobic010G007400 Sobic002G090700--Sobic010G007400 Sobic002G090700--Sobic003G217100 Sobic002G090700--Sobic004G159000 Sobic003G152900 Sobic003G152900 Sobic002G090700--Sobic003G152900 Sobic002G090700--Sobic004G066800 Sobic002G090700--Sobic001G309500 Sobic002G090700--Sobic002G078400 Sobic001G031900 Sobic001G031900 Sobic002G090700--Sobic001G031900 Sobic003G332401--Sobic002G296300 Sobic003G332401--Sobic003G115800 Sobic003G311700 Sobic003G311700 Sobic003G332401--Sobic003G311700 Sobic009G246950 Sobic009G246950 Sobic003G332401--Sobic009G246950 Sobic003G332401--Sobic007G186300 Sobic003G332401--Sobic002G090700 Sobic003G332401--Sobic003G007500 Sobic001G054200 Sobic001G054200 Sobic003G332401--Sobic001G054200 Sobic002G368400 Sobic002G368400 Sobic003G332401--Sobic002G368400 Sobic001G418900 Sobic001G418900 Sobic007G115100--Sobic001G418900 Sobic004G269700 Sobic004G269700 Sobic007G115100--Sobic004G269700 Sobic007G115100--Sobic003G155400 Sobic001G505500 Sobic001G505500 Sobic007G115100--Sobic001G505500 Sobic007G115100--Sobic010G153100 Sobic001G342200 Sobic001G342200 Sobic007G115100--Sobic001G342200 Sobic010G023800 Sobic010G023800 Sobic007G115100--Sobic010G023800 Sobic010G154700 Sobic010G154700 Sobic007G115100--Sobic010G154700 Sobic004G138800 Sobic004G138800 Sobic007G115100--Sobic004G138800
Octagon: transcription factors


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