Gene annotation
Transcriptome id Sobic.003G332401.1
Synonym -
Functional annotation -
UniProt A0A1W0W048
Pfam PF09439
Panther DB PTHR11711 PTHR11711:SF181
NCBI CDD KOG0070; GTP-binding ADP-ribosylation factor Arf1
KEGG Orthology K07937; ADP-ribosylation factor 1/2 K07977Arf/Sar family, other
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62290 : ADP-ribosylation factor A1E
RAP-DB (Rice) LOC_Os05g41060.1 : ADP-ribosylation factor, putative, expressed
MaizeGDB (Corn) Zm00025a044059 , Zm00025a016469 , Zm00025a035278 , Zm00025a027123 , Zm00025a013401 , Zm00025a045417 , Zm00025a039804
Brachypodium PNT73921 , PNT73073 , KQK12518 , KQJ92478 , KQK20333 , KQK20332 , KQK20335 , KQK10268 , KQK10269
Barley HORVU1Hr1G068790.8 , HORVU1Hr1G068790.3 , HORVU1Hr1G068790.5 , HORVU1Hr1G068790.4 , HORVU1Hr1G068790.7 , HORVU1Hr1G068790.6 , HORVU5Hr1G111500.3 , HORVU5Hr1G111500.2 , HORVU5Hr1G111500.1 , HORVU5Hr1G111500.5 , HORVU5Hr1G111500.4 , HORVU3Hr1G079700.2 , HORVU3Hr1G079700.3 , HORVU3Hr1G079700.1 , HORVU3Hr1G079700.6 , HORVU3Hr1G079700.7 , HORVU3Hr1G079700.4 , HORVU3Hr1G079700.5 , HORVU3Hr1G079700.8 , HORVU5Hr1G045440.4 , HORVU5Hr1G045440.5 , HORVU5Hr1G045440.6 , HORVU5Hr1G045440.1 , HORVU5Hr1G045440.2 , HORVU5Hr1G045440.3 , HORVU0Hr1G027130.5 , HORVU0Hr1G027130.4 , HORVU0Hr1G027130.6 , HORVU0Hr1G027130.1 , HORVU0Hr1G027130.3 , HORVU0Hr1G027130.2 , HORVU1Hr1G068790.2 , HORVU2Hr1G054780.4 , HORVU2Hr1G054780.5 , HORVU2Hr1G054780.2 , HORVU2Hr1G054780.3 , HORVU2Hr1G054780.1 , HORVU1Hr1G068790.1
Wheat TraesCS2D02G244900 , TraesCS2D02G244900 , TraesCS3A02G337300 , TraesCS3A02G337300 , TraesCS1B02G317000 , TraesCS3D02G330500 , TraesCS3D02G330500 , TraesCS5A02G467400 , TraesCS1A02G306200 , TraesCS5A02G142100 , TraesCS5B02G140900 , TraesCS5D02G150000 , TraesCS5D02G150000 , TraesCS2A02G235500 , TraesCS5D02G480200 , TraesCS5B02G479100 , TraesCS1D02G305900 , TraesCS3B02G368600 , TraesCS3B02G368600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G296300 expressed protein -
2 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
3 Sobic.003G311700 cyclase/dehydrase family protein, expressed K18588: coenzyme Q-binding protein COQ10
4 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
5 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
6 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
7 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
8 Sobic.001G054200 green ripe-like, putative, expressed -
9 Sobic.002G368400 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
10 Sobic.001G309500 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
11 Sobic.008G132800 expressed protein -
12 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
13 Sobic.001G367000 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
14 Sobic.008G180900 YIF1B, putative, expressed -
15 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
16 Sobic.003G116600 syntaxin, putative, expressed K08488: syntaxin 7
17 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
18 Sobic.004G224800 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
19 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
20 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta


Gene co-expression network
sample Sobic003G332401 Sobic003G332401 Sobic002G296300 Sobic002G296300 Sobic003G332401--Sobic002G296300 Sobic003G115800 Sobic003G115800 Sobic003G332401--Sobic003G115800 Sobic003G311700 Sobic003G311700 Sobic003G332401--Sobic003G311700 Sobic009G246950 Sobic009G246950 Sobic003G332401--Sobic009G246950 Sobic007G186300 Sobic007G186300 Sobic003G332401--Sobic007G186300 Sobic002G090700 Sobic002G090700 Sobic003G332401--Sobic002G090700 Sobic003G007500 Sobic003G007500 Sobic003G332401--Sobic003G007500 Sobic001G054200 Sobic001G054200 Sobic003G332401--Sobic001G054200 Sobic002G368400 Sobic002G368400 Sobic003G332401--Sobic002G368400 Sobic005G176000 Sobic005G176000 Sobic002G296300--Sobic005G176000 Sobic008G097401 Sobic008G097401 Sobic002G296300--Sobic008G097401 Sobic010G204300 Sobic010G204300 Sobic002G296300--Sobic010G204300 Sobic002G296300--Sobic007G186300 Sobic003G220600 Sobic003G220600 Sobic002G296300--Sobic003G220600 Sobic002G296300--Sobic003G115800 Sobic002G296300--Sobic003G332401 Sobic001G403700 Sobic001G403700 Sobic002G296300--Sobic001G403700 Sobic002G296300--Sobic003G007500 Sobic003G115800--Sobic007G186300 Sobic004G300900 Sobic004G300900 Sobic003G115800--Sobic004G300900 Sobic003G115800--Sobic003G220600 Sobic002G078400 Sobic002G078400 Sobic003G115800--Sobic002G078400 Sobic003G115800--Sobic010G204300 Sobic003G115800--Sobic001G054200 Sobic002G202300 Sobic002G202300 Sobic003G115800--Sobic002G202300 Sobic004G079100 Sobic004G079100 Sobic003G115800--Sobic004G079100 Sobic004G293700 Sobic004G293700 Sobic003G115800--Sobic004G293700 Sobic003G311700--Sobic003G332401 Sobic001G206000 Sobic001G206000 Sobic003G311700--Sobic001G206000 Sobic004G222600 Sobic004G222600 Sobic003G311700--Sobic004G222600 Sobic001G309500 Sobic001G309500 Sobic003G311700--Sobic001G309500 Sobic003G311700--Sobic002G368400 Sobic003G116600 Sobic003G116600 Sobic003G311700--Sobic003G116600 Sobic004G339300 Sobic004G339300 Sobic003G311700--Sobic004G339300 Sobic001G367000 Sobic001G367000 Sobic003G311700--Sobic001G367000 Sobic003G311700--Sobic010G204300 Sobic002G256300 Sobic002G256300 Sobic009G246950--Sobic002G256300 Sobic007G203700 Sobic007G203700 Sobic009G246950--Sobic007G203700 Sobic010G168600 Sobic010G168600 Sobic009G246950--Sobic010G168600 Sobic010G083700 Sobic010G083700 Sobic009G246950--Sobic010G083700 Sobic009G246950--Sobic001G054200 Sobic009G246950--Sobic007G186300 Sobic009G171700 Sobic009G171700 Sobic009G246950--Sobic009G171700 Sobic008G180900 Sobic008G180900 Sobic009G246950--Sobic008G180900 Sobic001G007200 Sobic001G007200 Sobic009G246950--Sobic001G007200 Sobic007G186300--Sobic003G007500 Sobic007G186300--Sobic001G054200 Sobic007G186300--Sobic003G115800 Sobic003G248600 Sobic003G248600 Sobic007G186300--Sobic003G248600 Sobic007G186300--Sobic001G007200 Sobic007G186300--Sobic009G246950 Sobic007G186300--Sobic010G083700 Sobic009G146100 Sobic009G146100 Sobic007G186300--Sobic009G146100 Sobic009G152200 Sobic009G152200 Sobic007G186300--Sobic009G152200 Sobic002G090700--Sobic003G116600 Sobic010G007400 Sobic010G007400 Sobic002G090700--Sobic010G007400 Sobic003G217100 Sobic003G217100 Sobic002G090700--Sobic003G217100 Sobic004G159000 Sobic004G159000 Sobic002G090700--Sobic004G159000 Sobic003G152900 Sobic003G152900 Sobic002G090700--Sobic003G152900 Sobic004G066800 Sobic004G066800 Sobic002G090700--Sobic004G066800 Sobic002G090700--Sobic001G309500 Sobic002G090700--Sobic002G078400 Sobic001G031900 Sobic001G031900 Sobic002G090700--Sobic001G031900 Sobic003G007500--Sobic007G186300 Sobic003G007500--Sobic010G083700 Sobic003G007500--Sobic010G168600 Sobic001G078500 Sobic001G078500 Sobic003G007500--Sobic001G078500 Sobic003G295400 Sobic003G295400 Sobic003G007500--Sobic003G295400 Sobic001G051200 Sobic001G051200 Sobic003G007500--Sobic001G051200 Sobic004G072800 Sobic004G072800 Sobic003G007500--Sobic004G072800 Sobic004G104900 Sobic004G104900 Sobic003G007500--Sobic004G104900 Sobic002G281300 Sobic002G281300 Sobic003G007500--Sobic002G281300 Sobic001G054200--Sobic010G083700 Sobic006G263900 Sobic006G263900 Sobic001G054200--Sobic006G263900 Sobic006G212100 Sobic006G212100 Sobic001G054200--Sobic006G212100 Sobic001G054200--Sobic007G186300 Sobic001G054200--Sobic004G293700 Sobic001G054200--Sobic009G246950 Sobic001G054200--Sobic004G079100 Sobic006G232200 Sobic006G232200 Sobic001G054200--Sobic006G232200 Sobic001G054200--Sobic003G115800 Sobic002G368400--Sobic003G332401 Sobic002G368400--Sobic003G116600 Sobic009G199700 Sobic009G199700 Sobic002G368400--Sobic009G199700 Sobic009G059700 Sobic009G059700 Sobic002G368400--Sobic009G059700 Sobic002G368400--Sobic001G367000 Sobic001G526100 Sobic001G526100 Sobic002G368400--Sobic001G526100 Sobic001G283500 Sobic001G283500 Sobic002G368400--Sobic001G283500 Sobic007G195701 Sobic007G195701 Sobic002G368400--Sobic007G195701 Sobic002G368400--Sobic001G309500
Octagon: transcription factors


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