Gene annotation
Transcriptome id Sobic.001G237500.5,Sobic.001G237500.2,Sobic.001G237500.3,Sobic.001G237500.1,Sobic.001G237500.4
Synonym Sb01g020990
Functional annotation transporter family protein, putative, expressed
UniProt A0A1B6QKL9 , A0A1B6QKM0
Pfam PF07690
Panther DB PTHR24064 PTHR24064:SF273
NCBI CDD KOG0253; Synaptic vesicle transporter SV2 (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G13050 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os09g38690.1,LOC_Os04g51970.1 : transporter family protein, putative, expressed,synaptic vesicle 2-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a017731
Brachypodium KQJ84477 , KQJ84471 , KQJ84470 , PNT61811 , PNT61809 , KQJ84476 , KQJ84475 , KQJ84472
Barley HORVU2Hr1G100090.8 , HORVU2Hr1G100090.9 , HORVU2Hr1G100090.1 , HORVU2Hr1G100090.2 , HORVU2Hr1G100090.3 , HORVU2Hr1G100090.4 , HORVU2Hr1G100090.5 , HORVU2Hr1G100090.6 , HORVU2Hr1G100090.7 , HORVU2Hr1G100090.12 , HORVU2Hr1G100090.13 , HORVU2Hr1G100090.10 , HORVU2Hr1G100090.11 , HORVU2Hr1G100090.16 , HORVU2Hr1G100090.17 , HORVU2Hr1G100090.14 , HORVU2Hr1G100090.18 , HORVU2Hr1G100090.19
Wheat TraesCS2D02G426500 , TraesCS2B02G449100 , TraesCS2B02G449100 , TraesCS2B02G449100 , TraesCS2B02G449100 , TraesCS2A02G428400 , TraesCS2A02G428400 , TraesCS2A02G428400 , TraesCS2D02G426500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G105600 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
2 Sobic.006G257001 - -
3 Sobic.001G105100 neighbor of COX4, putative, expressed -
4 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
5 Sobic.003G217100 Yip1 domain containing protein, expressed -
6 Sobic.004G222600 expressed protein -
7 Sobic.002G131900 expressed protein -
8 Sobic.003G052400 proline-rich family protein, putative, expressed -
9 Sobic.004G132300 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
10 Sobic.006G222400 RNA recognition motif containing protein, putative, expressed -
11 Sobic.006G034800 neighbor of COX4, putative, expressed -
12 Sobic.004G010900 OsFBK2 - F-box domain and kelch repeat containing protein, expressed -
13 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
14 Sobic.008G132800 expressed protein -
15 Sobic.003G400100 leaf senescence related protein, putative, expressed -
16 Sobic.002G309400 -(PubMedID : 26976818)@NAD-dependent malic enzyme, mitochondrial precursor, putative, expressed K00028: malate dehydrogenase (decarboxylating)
17 Sobic.001G041200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09567: PPIH, peptidyl-prolyl isomerase H (cyclophilin H)
18 Sobic.007G118000 double-stranded RNA binding motif containing protein, expressed -
19 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
20 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase


Gene co-expression network
sample Sobic001G237500 Sobic001G237500 Sobic010G105600 Sobic010G105600 Sobic001G237500--Sobic010G105600 Sobic006G257001 Sobic006G257001 Sobic001G237500--Sobic006G257001 Sobic001G105100 Sobic001G105100 Sobic001G237500--Sobic001G105100 Sobic001G067900 Sobic001G067900 Sobic001G237500--Sobic001G067900 Sobic003G217100 Sobic003G217100 Sobic001G237500--Sobic003G217100 Sobic004G222600 Sobic004G222600 Sobic001G237500--Sobic004G222600 Sobic002G131900 Sobic002G131900 Sobic001G237500--Sobic002G131900 Sobic003G052400 Sobic003G052400 Sobic001G237500--Sobic003G052400 Sobic004G132300 Sobic004G132300 Sobic001G237500--Sobic004G132300 Sobic010G105600--Sobic001G237500 Sobic010G105600--Sobic001G105100 Sobic003G405700 Sobic003G405700 Sobic010G105600--Sobic003G405700 Sobic010G105600--Sobic001G067900 Sobic003G400100 Sobic003G400100 Sobic010G105600--Sobic003G400100 Sobic010G105600--Sobic006G257001 Sobic002G272600 Sobic002G272600 Sobic010G105600--Sobic002G272600 Sobic001G061700 Sobic001G061700 Sobic010G105600--Sobic001G061700 Sobic006G034800 Sobic006G034800 Sobic010G105600--Sobic006G034800 Sobic006G257001--Sobic001G067900 Sobic006G257001--Sobic006G034800 Sobic006G257001--Sobic001G105100 Sobic006G257001--Sobic001G237500 Sobic001G041200 Sobic001G041200 Sobic006G257001--Sobic001G041200 Sobic006G257001--Sobic002G131900 Sobic006G257001--Sobic010G105600 Sobic006G257001--Sobic003G217100 Sobic002G301300 Sobic002G301300 Sobic006G257001--Sobic002G301300 Sobic001G105100--Sobic001G067900 Sobic001G105100--Sobic003G217100 Sobic008G132800 Sobic008G132800 Sobic001G105100--Sobic008G132800 Sobic001G105100--Sobic006G257001 Sobic001G105100--Sobic006G034800 Sobic001G105100--Sobic010G105600 Sobic001G105100--Sobic001G237500 Sobic006G222400 Sobic006G222400 Sobic001G105100--Sobic006G222400 Sobic008G137600 Sobic008G137600 Sobic001G105100--Sobic008G137600 Sobic001G067900--Sobic001G105100 Sobic004G072800 Sobic004G072800 Sobic001G067900--Sobic004G072800 Sobic001G067900--Sobic006G257001 Sobic002G281300 Sobic002G281300 Sobic001G067900--Sobic002G281300 Sobic001G067900--Sobic003G217100 Sobic001G067900--Sobic006G034800 Sobic006G250900 Sobic006G250900 Sobic001G067900--Sobic006G250900 Sobic010G205300 Sobic010G205300 Sobic001G067900--Sobic010G205300 Sobic001G067900--Sobic001G237500 Sobic003G217100--Sobic001G105100 Sobic002G090700 Sobic002G090700 Sobic003G217100--Sobic002G090700 Sobic003G217100--Sobic008G132800 Sobic003G217100--Sobic006G222400 Sobic001G309500 Sobic001G309500 Sobic003G217100--Sobic001G309500 Sobic003G217100--Sobic001G067900 Sobic005G184200 Sobic005G184200 Sobic003G217100--Sobic005G184200 Sobic003G217100--Sobic001G237500 Sobic001G408100 Sobic001G408100 Sobic003G217100--Sobic001G408100 Sobic007G150000 Sobic007G150000 Sobic004G222600--Sobic007G150000 Sobic003G023500 Sobic003G023500 Sobic004G222600--Sobic003G023500 Sobic004G222600--Sobic003G217100 Sobic004G222600--Sobic001G237500 Sobic004G222600--Sobic001G309500 Sobic002G296300 Sobic002G296300 Sobic004G222600--Sobic002G296300 Sobic004G222600--Sobic002G090700 Sobic003G332401 Sobic003G332401 Sobic004G222600--Sobic003G332401 Sobic007G115100 Sobic007G115100 Sobic004G222600--Sobic007G115100 Sobic002G131900--Sobic006G257001 Sobic002G131900--Sobic003G400100 Sobic004G274400 Sobic004G274400 Sobic002G131900--Sobic004G274400 Sobic002G131900--Sobic001G237500 Sobic002G131900--Sobic010G105600 Sobic002G131900--Sobic001G067900 Sobic002G131900--Sobic006G034800 Sobic002G131900--Sobic003G052400 Sobic002G131900--Sobic004G072800 Sobic010G017000 Sobic010G017000 Sobic003G052400--Sobic010G017000 Sobic003G052400--Sobic001G408100 Sobic002G348600 Sobic002G348600 Sobic003G052400--Sobic002G348600 Sobic003G052400--Sobic001G067900 Sobic008G003600 Sobic008G003600 Sobic003G052400--Sobic008G003600 Sobic003G052400--Sobic003G217100 Sobic009G160200 Sobic009G160200 Sobic003G052400--Sobic009G160200 Sobic003G052400--Sobic006G257001 Sobic003G052400--Sobic001G237500 Sobic001G283200 Sobic001G283200 Sobic004G132300--Sobic001G283200 Sobic001G033500 Sobic001G033500 Sobic004G132300--Sobic001G033500 Sobic006G217700 Sobic006G217700 Sobic004G132300--Sobic006G217700 Sobic001G206900 Sobic001G206900 Sobic004G132300--Sobic001G206900 Sobic006G148200 Sobic006G148200 Sobic004G132300--Sobic006G148200 Sobic004G132300--Sobic001G237500 Sobic002G294200 Sobic002G294200 Sobic004G132300--Sobic002G294200 Sobic004G132300--Sobic004G274400 Sobic006G034000 Sobic006G034000 Sobic004G132300--Sobic006G034000
Octagon: transcription factors


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